prot_H-paniculata_contig3829.10033.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3829.10033.1
Unique Nameprot_H-paniculata_contig3829.10033.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length320
Homology
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BLAST of mRNA_H-paniculata_contig3829.10033.1 vs. uniprot
Match: D8LMI6_ECTSI (Glycolipid 2-alpha-mannosyltransferase, N-terminal, family GT15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMI6_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 4.270e-74
Identity = 110/169 (65.09%), Postives = 135/169 (79.88%), Query Frame = 0 
Query:    1 MHQGMDPFRDRDLRDCYDRLRQDFVFGEPLRQIEVVTLGGGRTTKRSPSGVVAFMSTSLPSDIKDLMSALRHLSSNFLRRNRYPVAVIHEDFTRDVMERLQGLVPVPIHFLRVEFKLPDWMEPLSWIYPLAAKHFTGHPKSTPAVKYHSEMRGLLPYVKRNSFGYFHMC 169
            M QG +P  + D++ CYD +R++FVFGEPLRQIEVVT+G  +  K SP GVV +MSTS   DI  L  +L+ LS +FL ++ YPVA+IHEDFT D+M++++G+VPVPIHF++V FKLPDWMEPLSW+YPLA K FTGHPKS P V YHSEMRGLLPYVKR  FGYFHMC
Sbjct:  170 MKQGTEPVPEEDVQRCYDEMRKEFVFGEPLRQIEVVTMGEKKRVKDSPRGVVTYMSTSRTDDITALTQSLQTLSKSFLAQHPYPVAIIHEDFTTDLMKKIRGMVPVPIHFVKVAFKLPDWMEPLSWVYPLAVKQFTGHPKSEPVVGYHSEMRGLLPYVKRGGFGYFHMC 338
[Close]
BLAST of mRNA_H-paniculata_contig3829.10033.1 vs. uniprot
Match: D8LMI7_ECTSI (Glycolipid 2-alpha-mannosyltransferase, C-terminal, family GT15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMI7_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 3.140e-22
Identity = 60/153 (39.22%), Postives = 75/153 (49.02%), Query Frame = 0 
Query:  170 SRFFSGAGFMLPFFDDFEFYMRLDSESTCRQIMPDYFQQLEDAGADYAFDSTVLDYGEKVQGLWNFAEKYIITNNIEPTFWDSPDGAGKQFAALGQARARAPYPNCNNQPLTDEPVVN--VGGADIHTVPCNTGHFQAMPAFYTNFEVARLKV 320
            SRFF+GAG+MLPFFDDF+FY RLDS+S C + +PD+F  LE                                                   AL  A++RAPYP C  +       V+    GA IH VPC   HFQA+PAFYTNFEVAR+++
Sbjct:    2 SRFFAGAGYMLPFFDDFDFYFRLDSDSLCARPIPDHFSALE---------------------------------------------------ALAAAKSRAPYPRCEQEEGRARNSVDRTPEGAAIHHVPCRDRHFQAVPAFYTNFEVARIQM 103
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3829.10033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMI6_ECTSI4.270e-7465.09Glycolipid 2-alpha-mannosyltransferase, N-terminal... [more]
D8LMI7_ECTSI3.140e-2239.22Glycolipid 2-alpha-mannosyltransferase, C-terminal... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 41..320
e-value: 1.6E-19
score: 71.9
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 54..319
IPR002685Glycosyl transferase, family 15PFAMPF01793Glyco_transf_15coord: 54..243
e-value: 3.7E-11
score: 42.9
IPR002685Glycosyl transferase, family 15PANTHERPTHR31121FAMILY NOT NAMEDcoord: 52..243
NoneNo IPR availablePANTHERPTHR31121:SF6ALPHA-1,2 MANNOSYLTRANSFERASE KTR1coord: 52..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3829contigH-paniculata_contig3829:6824..16820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3829.10033.1mRNA_H-paniculata_contig3829.10033.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3829 6815..16820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3829.10033.1 ID=prot_H-paniculata_contig3829.10033.1|Name=mRNA_H-paniculata_contig3829.10033.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=320bp
MHQGMDPFRDRDLRDCYDRLRQDFVFGEPLRQIEVVTLGGGRTTKRSPSG
VVAFMSTSLPSDIKDLMSALRHLSSNFLRRNRYPVAVIHEDFTRDVMERL
QGLVPVPIHFLRVEFKLPDWMEPLSWIYPLAAKHFTGHPKSTPAVKYHSE
MRGLLPYVKRNSFGYFHMCSRFFSGAGFMLPFFDDFEFYMRLDSESTCRQ
IMPDYFQQLEDAGADYAFDSTVLDYGEKVQGLWNFAEKYIITNNIEPTFW
DSPDGAGKQFAALGQARARAPYPNCNNQPLTDEPVVNVGGADIHTVPCNT
GHFQAMPAFYTNFEVARLKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR002685Glyco_trans_15