prot_H-paniculata_contig38250.10024.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38250.10024.1
Unique Nameprot_H-paniculata_contig38250.10024.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length112
Homology
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BLAST of mRNA_H-paniculata_contig38250.10024.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 8.100e-17
Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = 0 
Query:    1 MPVVQWALNTAHWATLGTTPRQLMFGRAPRTVFSLLADNSGAELNVDDIGVPPERMQEVVEEWVKSQEKLRRDVLERIRLHRERKPGTASRGQMPEFEPGDYVLTA 106
            +P VQWALNTA+     +TP  +MFGRAPRT FS LA +SG   N+D +     ++++ V+  +++Q  L + V +++  +R R+   ASRG +P F  GDYV+ A
Sbjct: 1399 VPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDAT--KLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVA 1502
[Close]
BLAST of mRNA_H-paniculata_contig38250.10024.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 8.190e-17
Identity = 43/106 (40.57%), Postives = 67/106 (63.21%), Query Frame = 0 
Query:    1 MPVVQWALNTAHWATLGTTPRQLMFGRAPRTVFSLLADNSGAELNVDDIGVPPERMQEVVEEWVKSQEKLRRDVLERIRLHRERKPGTASRGQMPEFEPGDYVLTA 106
            +P VQWALNTA+     +TP  +MFGRAPRT FS LA +SG   N+D +     ++++ V+  +++Q  L + + +++  +R R+   ASRG +P F  GDYV+ A
Sbjct:  176 VPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDAT--KLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVA 279
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38250.10024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE8.100e-1741.51Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVS6_9PHAE8.190e-1740.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38250contigH-paniculata_contig38250:1578..1913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38250.10024.1mRNA_H-paniculata_contig38250.10024.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38250 1560..1913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38250.10024.1 ID=prot_H-paniculata_contig38250.10024.1|Name=mRNA_H-paniculata_contig38250.10024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp
MPVVQWALNTAHWATLGTTPRQLMFGRAPRTVFSLLADNSGAELNVDDIG
VPPERMQEVVEEWVKSQEKLRRDVLERIRLHRERKPGTASRGQMPEFEPG
DYVLTAWNHPET
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