prot_H-paniculata_contig38213.10018.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38213.10018.1
Unique Nameprot_H-paniculata_contig38213.10018.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length48
Homology
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BLAST of mRNA_H-paniculata_contig38213.10018.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.540e-10
Identity = 26/40 (65.00%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:    2 SHIPKVMFICAVSRPDHSRDFDGKIGIWRVCVMKQAQRNS 41
            SH+PK+M I A +RPD + DFDGKIGIWR+CV++ AQR+S
Sbjct:  189 SHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSS 228
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38213.10018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE1.540e-1065.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 3..47
NoneNo IPR availablePANTHERPTHR47169:SF1coord: 3..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38213contigH-paniculata_contig38213:1756..1899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38213.10018.1mRNA_H-paniculata_contig38213.10018.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38213 1414..1908 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38213.10018.1 ID=prot_H-paniculata_contig38213.10018.1|Name=mRNA_H-paniculata_contig38213.10018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=48bp
MSHIPKVMFICAVSRPDHSRDFDGKIGIWRVCVMKQAQRNSARRERG*
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