prot_H-paniculata_contig3821.10016.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3821.10016.1
Unique Nameprot_H-paniculata_contig3821.10016.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length155
Homology
BLAST of mRNA_H-paniculata_contig3821.10016.1 vs. uniprot
Match: D8LC14_ECTSI (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC14_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 4.250e-56
Identity = 94/136 (69.12%), Postives = 113/136 (83.09%), Query Frame = 0
Query:   21 GNIPEDKLQVTFTRSSGAGGQNVNKVSTKVELRFVVEDADWLPIDVRTRLSRHQSSRVNKDGELVVTSQEFRTQSQNRSMAVKKLKQMVEEAWSPPKERNMRTGISKTGKAIRRADKEFRAKVKANRSKV--RDFD 154
            G +PED+LQV+FTR+SGAGGQNVNKVSTKVE+RFVV +A+WLP DVR RL+R +  R+N  GELVVT+QEFRTQ QNRS A+ KL++M+ EAW P KER MRTGISK GKAIR+ DK  R+KVKA RSK+  RD+D
Sbjct:  115 GEVPEDQLQVSFTRASGAGGQNVNKVSTKVEMRFVVSEAEWLPYDVRLRLARQEKGRMNNKGELVVTAQEFRTQKQNRSQALAKLREMINEAWEPAKERKMRTGISKKGKAIRKQDKLHRSKVKAGRSKLSSRDYD 250          
BLAST of mRNA_H-paniculata_contig3821.10016.1 vs. uniprot
Match: A0A8J5Y1J9_DIALT (RF_PROK_I domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y1J9_DIALT)

HSP 1 Score: 133 bits (335), Expect = 5.970e-37
Identity = 70/128 (54.69%), Postives = 93/128 (72.66%), Query Frame = 0
Query:   23 IPEDKLQVTFTRSSGAGGQNVNKVSTKVELRFVVEDADWLPIDVRTRLSRHQSSRVNKDGELVVTSQEFRTQSQNRSMAVKKLKQMVEEAWSPPKERNMRTGISKTGKAIRRADKEFRAKVKANRSKV 150
            +P+ K+Q+  +RSSG GGQNVNKV+TKVELRF V  ADWLP DV+ RL    S+R+NK+GEL+VT+ E R+QS N   A++K++++V+ A  PPKER MR G+S   K  R  DK   AKVK +RS+V
Sbjct:   33 VPKAKMQIAHSRSSGPGGQNVNKVNTKVELRFNVRAADWLPADVKARLIDDNSNRMNKEGELIVTASESRSQSANMDSALRKVQELVDVACIPPKEREMRVGLSAVTKRQRVEDKRRTAKVKQSRSRV 160          
BLAST of mRNA_H-paniculata_contig3821.10016.1 vs. uniprot
Match: B8C3Q8_THAPS (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Q8_THAPS)

HSP 1 Score: 132 bits (332), Expect = 6.950e-37
Identity = 68/128 (53.12%), Postives = 92/128 (71.88%), Query Frame = 0
Query:   23 IPEDKLQVTFTRSSGAGGQNVNKVSTKVELRFVVEDADWLPIDVRTRLSRHQSSRVNKDGELVVTSQEFRTQSQNRSMAVKKLKQMVEEAWSPPKERNMRTGISKTGKAIRRADKEFRAKVKANRSKV 150
            IPED++Q +F RSSGAGGQNVNKV TKVELRF ++ A W+P +VR RL  ++++R+N DG + V SQE+RTQ QNR  A+KKL+ ++  +W+ PK R MR G+S   K  RR  K+  ++ KANR  V
Sbjct:    3 IPEDQIQTSFARSSGAGGQNVNKVETKVELRFHLDSASWIPAEVRERLKTNEANRINNDGFMSVNSQEYRTQVQNRKDALKKLEDILRNSWARPKVRKMRKGLSAKTKENRREMKKKISQKKANRRSV 130          
BLAST of mRNA_H-paniculata_contig3821.10016.1 vs. uniprot
Match: A0A7S2PK85_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PK85_9STRA)

HSP 1 Score: 130 bits (328), Expect = 8.570e-35
Identity = 65/131 (49.62%), Postives = 96/131 (73.28%), Query Frame = 0
Query:   23 IPEDKLQVTFTRSSGAGGQNVNKVSTKVELRFVVEDADWLPIDVRTRLSRHQSSRVNKDGELVVTSQEFRTQSQNRSMAVKKLKQMVEEAWSPPKERNMRTGISKTGKAIRRADKEFRAKVKANRSKVRDF 153
            IPED++Q++F R+SGAGGQNVNKV+TKVELRF ++ A+W+P +VR RL  +++ R+N +G   +T QE RTQ QNR  A+KKL+ +++ +W  PK R +R G++K  K  RR +K+  ++ K NR +V DF
Sbjct:  126 IPEDQIQLSFARASGAGGQNVNKVNTKVELRFHIDSANWIPREVRDRLKTNEAGRINNEGYFAITCQENRTQVQNRKEAIKKLQDILKSSWDRPKVRKLRKGLTKKAKENRRENKKKISQKKENRRRV-DF 255          
BLAST of mRNA_H-paniculata_contig3821.10016.1 vs. uniprot
Match: A0A7S1D533_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D533_CYCTE)

HSP 1 Score: 130 bits (327), Expect = 1.580e-34
Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 0
Query:   23 IPEDKLQVTFTRSSGAGGQNVNKVSTKVELRFVVEDADWLPIDVRTRLSRHQSSRVNKDGELVVTSQEFRTQSQNRSMAVKKLKQMVEEAWSPPKERNMRTGISKTGKAIRRADKEFRAKVKANRSKV 150
            IPED++ ++F+RS G+GGQNVNKV+TKVELRF ++DADWLP +VR R+     +R+NKDG   + S E RTQ QNR  A  KL+++V  A+  PK R +R GISK  K     DK+ R +VKANR  V
Sbjct:  134 IPEDRVDISFSRSGGSGGQNVNKVNTKVELRFKLDDADWLPDEVRDRIREQAPNRINKDGVFNIQSSENRTQQQNRRAAFTKLQEIVLRAYPRPKVRKLRKGISKKAKERNLEDKKRRGQVKANRKSV 261          
BLAST of mRNA_H-paniculata_contig3821.10016.1 vs. uniprot
Match: A0A1E7F9H8_9STRA (Class I peptide chain release factor (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F9H8_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.920e-33
Identity = 66/129 (51.16%), Postives = 89/129 (68.99%), Query Frame = 0
Query:   22 NIPEDKLQVTFTRSSGAGGQNVNKVSTKVELRFVVE---DADWLPIDVRTRLSRHQSSRVNKDGELVVTSQEFRTQSQNRSMAVKKLKQMVEEAWSPPKERNMRTGISKTGKAIRRADKEFRAKVKANR 147
            NI E++L ++F RSSGAGGQNVNK+STK E+R  V     + WLP +VR RL   QS+R++K+G L +  QE RTQ  N++ A+KKLK M++EAW  PK RN RTG+SK  K   +  K+ R++ K NR
Sbjct:    2 NIKEEELNISFVRSSGAGGQNVNKLSTKCEIRMDVNLKSSSSWLPDEVRRRLIEQQSNRISKEGILTLNCQENRTQGMNKATALKKLKDMIKEAWVRPKIRNQRTGVSKATKRRNKEFKKARSETKNNR 130          
BLAST of mRNA_H-paniculata_contig3821.10016.1 vs. uniprot
Match: A0A7S2BJ82_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BJ82_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.220e-33
Identity = 69/125 (55.20%), Postives = 85/125 (68.00%), Query Frame = 0
Query:   23 IPEDKLQVTFTRSSGAGGQNVNKVSTKVELRFVVEDADWLPIDVRTRLSRHQSSRVNKDGELVVTSQEFRTQSQNRSMAVKKLKQMVEEAWSPPKERNMRTGISKTGKAIRRADKEFRAKVKANR 147
            +PE++L  TFT S G GGQNVNKV+T+   RF V  ADWLP++VR RL   Q  R+N+  EL+V+SQE RTQ +NR   + KLK +V EA   PKERN+ T ISK GK  RR  K  R+KVK NR
Sbjct:   76 VPENRLVFTFTPSQGPGGQNVNKVNTRAVARFHVPSADWLPVEVRGRLVEQQRGRMNQKDELIVSSQEHRTQRRNRVECLLKLKLLVAEAAVEPKERNLYTDISKKGKGQRRDAKRHRSKVKENR 200          
BLAST of mRNA_H-paniculata_contig3821.10016.1 vs. uniprot
Match: W7T6I3_9STRA (Peptidyl-trna hydrolase mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6I3_9STRA)

HSP 1 Score: 125 bits (313), Expect = 5.330e-33
Identity = 67/132 (50.76%), Postives = 93/132 (70.45%), Query Frame = 0
Query:   23 IPEDKLQVTFTRSSGAGGQNVNKVSTKVELRFVVEDADWLPIDVRTRLSRHQSSRVNKDGELVVTSQEFRTQSQNRSMAVKKLKQMVEEAWSPPKERNMRTGISKTGKAIRRADKEFRAKVKANRSKVRDFD 154
            IP D+L  +++RSSG GGQNVNK++T+VELRF VEDADW+P D+R R    Q  RVNK GE V++SQE RTQ +NR   V+KL++ +  A   PK RNMRTG+++  K  R  +K+ R++ KA+R +   +D
Sbjct:   82 IPHDRLDFSYSRSSGPGGQNVNKLNTRVELRFHVEDADWIPEDMRHRFLEQQRHRVNKLGEFVLSSQEHRTQLKNREECVRKLEEALTRAAVVPKRRNMRTGLTEWEKENRLREKKKRSEKKASRRRNGKWD 213          
BLAST of mRNA_H-paniculata_contig3821.10016.1 vs. uniprot
Match: A0A1Z5KFY9_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFY9_FISSO)

HSP 1 Score: 125 bits (314), Expect = 5.430e-33
Identity = 67/131 (51.15%), Postives = 92/131 (70.23%), Query Frame = 0
Query:   23 IPEDKLQVTFTRSSGAGGQNVNKVSTKVELRFVVEDADWLPIDVRTRLSRHQSSRVNKDGELVVTSQEFRTQSQNRSMAVKKLKQMVEEAWSPPKERNMRTGISKTGKAIRRADKEFRAKVKANRSKVRDF 153
            IPE+ L  +F RSSGAGGQNVNKV+++V+LR  V +A W+P +VR RL + Q++R++K+G L + +QE RTQ  NR  A++KL+ M+ +AW  PKER +R GIS   K  R+  K  R+ VKA R KV DF
Sbjct:   99 IPEENLDFSFVRSSGAGGQNVNKVNSQVQLRLNVNEAYWIPYEVRQRLMQQQANRISKEGVLTIAAQEHRTQVANRKAAIQKLRDMLLQAWPRPKERRIRQGISIKTKEQRKEFKRRRSDVKAGRKKV-DF 228          
BLAST of mRNA_H-paniculata_contig3821.10016.1 vs. uniprot
Match: A0A6U3Q7S5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q7S5_9STRA)

HSP 1 Score: 127 bits (319), Expect = 5.860e-33
Identity = 68/131 (51.91%), Postives = 91/131 (69.47%), Query Frame = 0
Query:   23 IPEDKLQVTFTRSSGAGGQNVNKVSTKVELRFVVEDADWLPIDVRTRLSRHQSSRVNKDGELVVTSQEFRTQSQNRSMAVKKLKQMVEEAWSPPKERNMRTGISKTGKAIRRADKEFRAKVKANRSKVRDF 153
            IP D+L+ +F RSSGAGGQNVNK+STKVELRF V  A+W+P +VR RLS   ++R+NK+G + + SQEFRTQ+ N+   V KL+ +V  A+  PK R MR G+S+  K     DK+ R+  K NR +V DF
Sbjct:  175 IPLDQLEFSFVRSSGAGGQNVNKLSTKVELRFHVSSANWIPFEVRQRLSSQNANRMNKEGYMTLNSQEFRTQAMNKKDVVNKLEDLVLLAYPRPKVRKMRKGVSQAAKRRNLEDKKRRSSTKQNRKRV-DF 304          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3821.10016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC14_ECTSI4.250e-5669.12RF_PROK_I domain-containing protein n=1 Tax=Ectoca... [more]
A0A8J5Y1J9_DIALT5.970e-3754.69RF_PROK_I domain-containing protein n=1 Tax=Diacro... [more]
B8C3Q8_THAPS6.950e-3753.13RF_PROK_I domain-containing protein (Fragment) n=1... [more]
A0A7S2PK85_9STRA8.570e-3549.62Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1D533_CYCTE1.580e-3453.13Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1E7F9H8_9STRA2.920e-3351.16Class I peptide chain release factor (Fragment) n=... [more]
A0A7S2BJ82_9STRA3.220e-3355.20Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7T6I3_9STRA5.330e-3350.76Peptidyl-trna hydrolase mitochondrial-like protein... [more]
A0A1Z5KFY9_FISSO5.430e-3351.15Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A6U3Q7S5_9STRA5.860e-3351.91Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 21..152
e-value: 1.4E-23
score: 83.1
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 34..50
NoneNo IPR availableGENE3D3.30.160.20coord: 16..153
e-value: 3.9E-41
score: 142.0
NoneNo IPR availablePANTHERPTHR11075PEPTIDE CHAIN RELEASE FACTORcoord: 14..151
NoneNo IPR availableSUPERFAMILY110916Peptidyl-tRNA hydrolase domain-likecoord: 16..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3821contigH-paniculata_contig3821:7843..11969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3821.10016.1mRNA_H-paniculata_contig3821.10016.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3821 7355..13721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3821.10016.1 ID=prot_H-paniculata_contig3821.10016.1|Name=mRNA_H-paniculata_contig3821.10016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
MHEGGGGGGADDRPISSQFSGNIPEDKLQVTFTRSSGAGGQNVNKVSTKV
ELRFVVEDADWLPIDVRTRLSRHQSSRVNKDGELVVTSQEFRTQSQNRSM
AVKKLKQMVEEAWSPPKERNMRTGISKTGKAIRRADKEFRAKVKANRSKV
RDFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I