prot_H-paniculata_contig3799.9959.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3799.9959.1
Unique Nameprot_H-paniculata_contig3799.9959.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length411
Homology
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BLAST of mRNA_H-paniculata_contig3799.9959.1 vs. uniprot
Match: D8LDF6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF6_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 4.470e-63
Identity = 130/216 (60.19%), Postives = 160/216 (74.07%), Query Frame = 0 
Query:   47 KPASAGGIATRTTINNPGRTPQPPVEAANRDHALMKITLLAQRKKIQDLMAKVEGLEAEKESMRQQVDTLRMAVFEASTSLDQTAQQ----------------YKRDAVEAAVREIAHHRQSFVEGRREAIARIEELEDALKIALKASLGVHRQLLDLGLSCGDLAKSNLHLSVAAQDAPAEDQPALALAGKAIEAVVGVMRSMEGSGVFDLLAPV 246
            KP  A G    +++ + G   Q   +  N D  LMK TL+AQ KKIQ L AK++G+E+E+E+M QQV  LRMAVFEAST  +QTA+Q                YKRDAVEAAVREIA  R++F EGRREA+ RI ELEDAL+IALKA+ GVHR+LL+LGLSC DL K+++HLSVAAQ+APAED+PALA+AG+ IEAVVGVMR+ME SGVFD+L PV
Sbjct:   35 KPPKAEGATASSSLRDNGAGAQQTGQGGN-DKLLMKRTLVAQSKKIQQLTAKIDGMESEREAMAQQVAALRMAVFEASTRAEQTAEQLIKDSASFVHRGVLLQYKRDAVEAAVREIAQDREAFAEGRREAVKRIGELEDALEIALKAAGGVHRKLLELGLSCEDLGKTSVHLSVAAQEAPAEDKPALAVAGETIEAVVGVMRAMERSGVFDILDPV 249
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3799.9959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDF6_ECTSI4.470e-6360.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..177
NoneNo IPR availableCOILSCoilCoilcoord: 85..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3799contigH-paniculata_contig3799:5079..15026 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3799.9959.1mRNA_H-paniculata_contig3799.9959.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3799 4339..15165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3799.9959.1 ID=prot_H-paniculata_contig3799.9959.1|Name=mRNA_H-paniculata_contig3799.9959.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=411bp
MAQQGFGGDGSGDTGVHHVSPNTNVAASNATAPMSEGGYNNSSCSDKPAS
AGGIATRTTINNPGRTPQPPVEAANRDHALMKITLLAQRKKIQDLMAKVE
GLEAEKESMRQQVDTLRMAVFEASTSLDQTAQQYKRDAVEAAVREIAHHR
QSFVEGRREAIARIEELEDALKIALKASLGVHRQLLDLGLSCGDLAKSNL
HLSVAAQDAPAEDQPALALAGKAIEAVVGVMRSMEGSGVFDLLAPVVGED
GGHGPDQNDTTQKRHQEGAVQEEGLVDTDTSAASVSAPVAVSAQGTSPSS
ADRSGPSTVVPLVVDNDEKHASKKPVEGPSSLRPPSSSSSLPAPAVSVPA
VVGSMQVVLENDGRGKGGSTDYDSREVGGGLEDDVGGGGGNDDNDDDIAV
AIGGTVCKTG*
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