prot_H-paniculata_contig379.9944.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig379.9944.1
Unique Nameprot_H-paniculata_contig379.9944.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length631
Homology
BLAST of mRNA_H-paniculata_contig379.9944.1 vs. uniprot
Match: D8LRA9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRA9_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 7.260e-79
Identity = 186/323 (57.59%), Postives = 216/323 (66.87%), Query Frame = 0
Query:  117 GATLPAWMTDPGLVAGGLQQG----RAEGNXXXXXXXXXXXXXXXXXXXXXSPARFAPPHSGGGXXXXXXIGSYGVRGSWXXXXXXXXXXXXXXXXXXGRGRVVGP------LPPVFSVHKGKVARVQSKYGAFVKLDGYSKDGLVHLSQMASFRVEDPTDVCKEGDAVYVKVIEVKDSQDPREQRISLSMKLVDQSTGEDLDVNNAEAETDAQRRKARTQGVDRAPVKLDAVFNTTCTRCGGHGHLSIDCFSRGGQKYELIDEEDPRDMDSRHAANG-GSKMRGVLREVAFLQTVPPVG---LAGGRGRGATLPAWMTEMGL 425
            G+T+PAWMT PG   GGLQ+     R +G                      SP RFA   S G       + + G+ G  XXXXXXXXXXXXXXXXXX              LP VFSVHKG+V + ++ +GAF+KLDGY K GLVH SQMAS+RVED TDVCK GD VY KVIEV D  DPREQRI+LSMKLV+Q+ G+DLD +NAEAETDAQR++    G DRAPV+L+AVFNTTCT+CG HGHLSIDCFSRGG+KYEL+DEEDPRD     A  G G+ MRGV RE       PP G   LAGGRGRGAT+PAWM ++GL
Sbjct:  141 GSTIPAWMTHPG-GPGGLQESDRGDRGDGRPSKDK----------------SPPRFA--RSAGPLPPEPTMANGGITGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEKLPEVFSVHKGEVVKTET-FGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGADPREQRIALSMKLVNQADGKDLDPSNAEAETDAQRKRPAGGG-DRAPVQLEAVFNTTCTKCGVHGHLSIDCFSRGGKKYELVDEEDPRDNGRGGAGGGTGNGMRGVHRE-------PPHGGGALAGGRGRGATMPAWMNDLGL 435          
BLAST of mRNA_H-paniculata_contig379.9944.1 vs. uniprot
Match: A0A835YH79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH79_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.080e-36
Identity = 101/269 (37.55%), Postives = 135/269 (50.19%), Query Frame = 0
Query:  219 LPPVFSVHKGKVARVQSKYGAFVKLDGYSKDGLVHLSQMASFRVEDPTDVCKEGDAVYVK------------------------------------VIEVKDSQDPREQRISLSMKLVDQSTGEDLDVNNAEAETDAQRRKA-----------RTQGVDRAPVKLDAVFNTTCTRCGGHG-------------------HLSIDCFSRGGQKYELIDEEDPRDMDSRHAANGGSKMRGVLREVAFLQTVPPVGLAGGRGRGATLPAWMT 421
            LP ++SVH G+VA VQ  +G FV   G+ K GLVH SQ+A +RVED  D    GD V+VK                                    VI+V++   PRE ++++SMKLVDQSTG+DLD  N EA+ +A RR                   + P++L AVFNT C++CG                      H+S+DCFSRGGQKYEL+ E    D++    A G   M+GV +       VPP  ++ GRG+ ATLP+WMT
Sbjct:  285 LPALYSVHHGEVASVQD-FGCFVSAPGHRKHGLVHKSQLAQYRVEDVADAVAVGDKVWVKYQXXXXXXXXXXXXXXXXXXKGGXXXXXXXXXXXXKVIDVQEGATPRESKVAMSMKLVDQSTGKDLDPTNEEAQDEAARRMGGGGXRXXXXXXXXXXAPKGPIELGAVFNTVCSKCGAXXXXXXXXXXXXXXXXXXXXXHMSVDCFSRGGQKYELVTE----DLEGGEPAGG---MKGVAKP----PDVPPPSVSMGRGKAATLPSWMT 541          
BLAST of mRNA_H-paniculata_contig379.9944.1 vs. uniprot
Match: A0A7S2TF11_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2TF11_9EUKA)

HSP 1 Score: 145 bits (366), Expect = 8.760e-36
Identity = 78/156 (50.00%), Postives = 111/156 (71.15%), Query Frame = 0
Query:  220 PPVFSVHKGKVARVQSKYGAFVKLDGYSKDGLVHLSQMASFRVEDPTDVCKEGDAVYVKVIEVKDSQDPREQ---RISLSMKLVDQSTGEDLDVNNAEAETDAQRRKARTQGVDRAPVKLDAVFNTTCTRCGGHGHLSIDCFSRGGQKYELIDEED 372
            P ++SVH+G V  V+  YGAFVKLDG+   GLVH+SQ+A+++V++PTDV   G  V+VKV+  +   DP+++   ++SLSMKLV Q  GEDLD +N EAE    R  AR Q  D   ++L A++NT CT+CGGHGHL+  CF+  G+KY+LI+++D
Sbjct:  116 PKMYSVHQGNVVSVRD-YGAFVKLDGFYAQGLVHVSQLAAWKVDNPTDVVNVGQRVWVKVVACE--PDPKKEGRKKVSLSMKLVSQEDGEDLDKSNIEAEQLTDR--ARYQQQDAKRIELGAIYNTICTKCGGHGHLATQCFT--GKKYDLIEDDD 264          
BLAST of mRNA_H-paniculata_contig379.9944.1 vs. uniprot
Match: A0A1A7YY55_9TELE (Zinc finger, CCHC domain containing 17 n=2 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A7YY55_9TELE)

HSP 1 Score: 139 bits (351), Expect = 1.600e-34
Identity = 76/156 (48.72%), Postives = 110/156 (70.51%), Query Frame = 0
Query:  219 LPPVFSVHKGKVARVQSKYGAFVKLDGYSKDGLVHLSQMASFRVEDPTDVCKEGDAVYVKVI--EVKDSQDPREQRISLSMKLVDQSTGEDLDVNNAEAETDAQRRKA-RTQGVDRAPVKLDAVFNTTCTRCGGHGHLSIDCFSRGGQKYELIDEE 371
            LPP++S+ KG+V  VQ+ YGAFV+L GY K+GLVH+S+M++ RVE  +++   G+ V++KVI  E++  +     ++S SMK V+Q TG DLD NN +AE DA+RR+  R QG +R  + L+AV NTTC++CG  GH + DCFS  G +Y L+ EE
Sbjct:   17 LPPMYSIAKGEVVSVQT-YGAFVRLPGYRKEGLVHVSEMSATRVESASEIVDVGEQVWIKVIGREIQGEK----VKLSFSMKAVNQGTGRDLDPNNVQAEQDARRRRQFRDQGSNR--ITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALVPEE 165          
BLAST of mRNA_H-paniculata_contig379.9944.1 vs. uniprot
Match: UPI00097DB691 (nucleolar protein of 40 kDa n=3 Tax=Pleuronectoidei TaxID=30942 RepID=UPI00097DB691)

HSP 1 Score: 141 bits (355), Expect = 1.930e-34
Identity = 78/157 (49.68%), Postives = 110/157 (70.06%), Query Frame = 0
Query:  219 LPPVFSVHKGKVARVQSKYGAFVKLDGYSKDGLVHLSQMASFRVEDPTDVCKEGDAVYVKVI--EVKDSQDPREQRISLSMKLVDQSTGEDLDVNNAEAETDAQRRKA-RTQGVDRAPVKLDAVFNTTCTRCGGHGHLSIDCFSRGGQKYELIDEED 372
            LPP++S+ KG+V  VQ+ YGAFV+L GY K+GLVH+S+M++ RVE+ +++   G+ V++KVI  E++D +     ++S SMK V+Q TG DLD NN  AE DA+RRK  R Q  +R  + L+AV NTTC +CG  GH + DCFS  G +Y L+ EED
Sbjct:   17 LPPLYSIAKGEVVSVQA-YGAFVRLPGYKKEGLVHVSEMSASRVENASEIVDVGEQVWIKVIGKEIRDDK----VKMSFSMKAVNQGTGRDLDPNNVNAEQDARRRKLFRDQTGNR--ITLEAVLNTTCAKCGCKGHFTKDCFSAPGLQYALLPEED 166          
BLAST of mRNA_H-paniculata_contig379.9944.1 vs. uniprot
Match: A0A3B3ZR79_9GOBI (Zinc finger, CCHC domain containing 17 n=3 Tax=Oxudercinae TaxID=497678 RepID=A0A3B3ZR79_9GOBI)

HSP 1 Score: 140 bits (354), Expect = 2.200e-34
Identity = 76/156 (48.72%), Postives = 106/156 (67.95%), Query Frame = 0
Query:  219 LPPVFSVHKGKVARVQSKYGAFVKLDGYSKDGLVHLSQMASFRVEDPTDVCKEGDAVYVKVI--EVKDSQDPREQRISLSMKLVDQSTGEDLDVNNAEAETDAQRRKARTQGVDRAPVKLDAVFNTTCTRCGGHGHLSIDCFSRGGQKYELIDEED 372
            LPP+FS+ KG+V  VQ+ YGAFV+L GY   GLVH+S+M++ RVE+P+++   G+ V++KVI  E+   +     ++S SMK V+Q TG DLD NN  A+ DA+RRK    G  R  + L+AV NTTC++CG  GH + DCFS  G +Y L+ EED
Sbjct:   17 LPPLFSISKGEVVSVQT-YGAFVRLPGYKNQGLVHVSEMSASRVENPSEIVDVGEQVWIKVIGREIHGEK----VKLSFSMKAVNQGTGRDLDPNNVMADQDARRRKQFKDGT-RNKITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYTLLPEED 166          
BLAST of mRNA_H-paniculata_contig379.9944.1 vs. uniprot
Match: A0A4W6CXV4_LATCA (Zinc finger CCHC-type containing 17 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A4W6CXV4_LATCA)

HSP 1 Score: 140 bits (354), Expect = 2.720e-34
Identity = 79/162 (48.77%), Postives = 111/162 (68.52%), Query Frame = 0
Query:  219 LPPVFSVHKGKVARVQSKYGAFVKLDGYSKDGLVHLSQMASFRVEDPTDVCKEGDAVYVKVIEVKDSQDPREQRISLSMKLVDQSTGEDLDVNNAEAETDAQRRKA-RTQGVDRAPVKLDAVFNTTCTRCGGHGHLSIDCFSRGGQKYELIDEEDPRDMDSR 379
            LPP+FS+ KG+V  VQ+ YGAFV+L GY K+GLVH+S+M++ RVE+ +++   G+ V++KVI  +   D  + ++S SMK V+Q TG DLD NN  AE DA+RRK  R Q  +R  + L+AV NTTC++CG  GH + DCFS  G +Y L+ EED  +   R
Sbjct:   17 LPPLFSISKGEVVSVQT-YGAFVRLPGYRKEGLVHVSEMSASRVENASEIVDVGEQVWIKVIGREIHGD--KVKLSFSMKAVNQGTGRDLDPNNVMAEQDARRRKQFRDQTGNR--ITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEEDDEEPQQR 173          
BLAST of mRNA_H-paniculata_contig379.9944.1 vs. uniprot
Match: A0A3B4X9C6_SERLL (Zinc finger CCHC-type containing 17 n=2 Tax=Carangaria TaxID=1489904 RepID=A0A3B4X9C6_SERLL)

HSP 1 Score: 139 bits (350), Expect = 3.020e-34
Identity = 77/155 (49.68%), Postives = 109/155 (70.32%), Query Frame = 0
Query:  219 LPPVFSVHKGKVARVQSKYGAFVKLDGYSKDGLVHLSQMASFRVEDPTDVCKEGDAVYVKVIEVKDSQDPREQRISLSMKLVDQSTGEDLDVNNAEAETDAQRRKA-RTQGVDRAPVKLDAVFNTTCTRCGGHGHLSIDCFSRGGQKYELIDEED 372
            LPP++S+ KG+V  VQ+ YGAFV+L GY K+GLVH+S+M++ RVE+ +++   G+ V++KVI  +   D  + ++S SMK V+Q TG DLD NN  AE DA+RRK  R Q  +R  + L+AV NTTC++CG  GH + DCFS  G +Y L+ EED
Sbjct:   16 LPPLYSISKGEVVSVQT-YGAFVRLPGYKKEGLVHVSEMSATRVENASEIVDVGEQVWIKVIGKEIRGD--KVKLSFSMKAVNQGTGRDLDPNNVMAEQDARRRKQFRDQTGNR--ITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEED 165          
BLAST of mRNA_H-paniculata_contig379.9944.1 vs. uniprot
Match: A0A3Q3M7U3_9TELE (Zinc finger, CCHC domain containing 17 n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A3Q3M7U3_9TELE)

HSP 1 Score: 140 bits (353), Expect = 3.370e-34
Identity = 74/155 (47.74%), Postives = 111/155 (71.61%), Query Frame = 0
Query:  219 LPPVFSVHKGKVARVQSKYGAFVKLDGYSKDGLVHLSQMASFRVEDPTDVCKEGDAVYVKVIEVKDSQDPREQRISLSMKLVDQSTGEDLDVNNAEAETDAQRRKA-RTQGVDRAPVKLDAVFNTTCTRCGGHGHLSIDCFSRGGQKYELIDEED 372
            LPP+++++KG+V  VQ+ YGAFV+L GY K GLVH+S+M++ RV++P+++   G+ V++KVI  +   D  + ++S SMK V+Q TG+DLD NN  AE DA+RRK  + Q  ++  + L+AV NTTC++CG  GH + DCFS  G +Y L+ EED
Sbjct:   12 LPPLYNIYKGEVVSVQT-YGAFVRLPGYKKQGLVHVSEMSATRVDNPSEIVDVGEQVWIKVIGKEIQGD--KVKLSFSMKAVNQGTGQDLDPNNVMAEQDARRRKQFKDQTANK--ITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEED 161          
BLAST of mRNA_H-paniculata_contig379.9944.1 vs. uniprot
Match: A0A6P7JSA3_9TELE (nucleolar protein of 40 kDa n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7JSA3_9TELE)

HSP 1 Score: 140 bits (352), Expect = 4.060e-34
Identity = 77/164 (46.95%), Postives = 113/164 (68.90%), Query Frame = 0
Query:  219 LPPVFSVHKGKVARVQSKYGAFVKLDGYSKDGLVHLSQMASFRVEDPTDVCKEGDAVYVKVIEVKDSQDPREQRISLSMKLVDQSTGEDLDVNNAEAETDAQRRKA-RTQGVDRAPVKLDAVFNTTCTRCGGHGHLSIDCFSRGGQKYELI---DEEDPRDMDS 378
            LPP++S+ KG+V  VQ+ YGAFV+L GY K+GLVH+S+M++ RVE  +++   G+ V++KVI  +   D  + ++S SMK V+Q TG+DLD NN  AE DA+RR+  R Q  +R  + L+AV NTTC++CG  GH + DCFS  G +Y L+   D+E+PR   +
Sbjct:   15 LPPLYSISKGEVVSVQT-YGAFVRLPGYKKEGLVHVSEMSASRVESASEIVDVGEQVWIKVIGREIQGD--KVKLSFSMKAVNQGTGQDLDPNNVNAEQDARRRRQFRDQSSNR--ITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEGDDEEPRQQQA 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig379.9944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRA9_ECTSI7.260e-7957.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YH79_9STRA1.080e-3637.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2TF11_9EUKA8.760e-3650.00Hypothetical protein (Fragment) n=2 Tax=Lotharella... [more]
A0A1A7YY55_9TELE1.600e-3448.72Zinc finger, CCHC domain containing 17 n=2 Tax=Not... [more]
UPI00097DB6911.930e-3449.68nucleolar protein of 40 kDa n=3 Tax=Pleuronectoide... [more]
A0A3B3ZR79_9GOBI2.200e-3448.72Zinc finger, CCHC domain containing 17 n=3 Tax=Oxu... [more]
A0A4W6CXV4_LATCA2.720e-3448.77Zinc finger CCHC-type containing 17 n=2 Tax=Percom... [more]
A0A3B4X9C6_SERLL3.020e-3449.68Zinc finger CCHC-type containing 17 n=2 Tax=Carang... [more]
A0A3Q3M7U3_9TELE3.370e-3447.74Zinc finger, CCHC domain containing 17 n=1 Tax=Mas... [more]
A0A6P7JSA3_9TELE4.060e-3446.95nucleolar protein of 40 kDa n=1 Tax=Parambassis ra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 221..298
e-value: 1.2E-15
score: 68.0
NoneNo IPR availableGENE3D2.40.50.140coord: 219..309
e-value: 2.1E-24
score: 87.4
NoneNo IPR availablePANTHERPTHR15838:SF1NUCLEOLAR PROTEIN OF 40 KDAcoord: 193..513
IPR003029S1 domainPFAMPF00575S1coord: 225..285
e-value: 4.3E-13
score: 49.4
IPR003029S1 domainPROSITEPS50126S1coord: 223..298
score: 17.839
IPR037320Nucleolar protein of 40kDaPANTHERPTHR15838FAMILY NOT NAMEDcoord: 193..513
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 344..357
score: 8.845
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 224..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig379contigH-paniculata_contig379:23762..37363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig379.9944.1mRNA_H-paniculata_contig379.9944.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig379 23579..37363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig379.9944.1 ID=prot_H-paniculata_contig379.9944.1|Name=mRNA_H-paniculata_contig379.9944.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=631bp
MTTGNLGGLSSTNTTNDNNSSRSFSGSREGAKRRRSPSRGGHSRSRSRSS
SRRWSKNGGGAAAAGARGDGAKVGGSGDSGRGGGRRSRSRAAAVATGGII
GRGGGGGAAAPMGRGRGATLPAWMTDPGLVAGGLQQGRAEGNGGGAAGRG
EGGGSRKNRSRSRSPARFAPPHSGGGGGGAGGIGSYGVRGSWGGGGGGRG
GGHGGRGSWGGRGRVVGPLPPVFSVHKGKVARVQSKYGAFVKLDGYSKDG
LVHLSQMASFRVEDPTDVCKEGDAVYVKVIEVKDSQDPREQRISLSMKLV
DQSTGEDLDVNNAEAETDAQRRKARTQGVDRAPVKLDAVFNTTCTRCGGH
GHLSIDCFSRGGQKYELIDEEDPRDMDSRHAANGGSKMRGVLREVAFLQT
VPPVGLAGGRGRGATLPAWMTEMGLRKDNESDNDRSRKKGHKKESKKSKK
HHKHHHHHHRRRRHRDDSNDGSSDSGNNESSSKKHKKRHHHSSSSGKKKK
HSSSSKRHRKDKSEERGGHLNGTGGGINTSSSSRRQNSDSEYVDHRRDRN
KSVDKASEPEEGEAFPEHAVNNGTRATSSSGRYGHGRFSSSRGRDSAVAG
APPGRGKTRGRSDSRAGEEGEVGGGSRSRSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR037320pNO40
IPR001878Znf_CCHC
IPR012340NA-bd_OB-fold