prot_H-paniculata_contig379.9943.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig379.9943.1
Unique Nameprot_H-paniculata_contig379.9943.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length469
Homology
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BLAST of mRNA_H-paniculata_contig379.9943.1 vs. uniprot
Match: A0A6H5LG27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG27_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 3.620e-72
Identity = 164/266 (61.65%), Postives = 189/266 (71.05%), Query Frame = 0 
Query:   17 IRSNSLPAAVNPSGGDAPTNRPNWWGDNSDTTPAAEDEMEPEPYPPNLEKGVSVKVRKKSMAGRTEIRRLYVRGDTIELVNPEKRMFRSQSKIFPLSELTAVVAQGERSLSLSLGSKGLHLTLADRATKEFLWEHLRKMREQAREQAKASRLTRASSIDHI-SMGEDMKSKKK-RMFKRSQSYNDAA-VAAXXXXXXXXXXXXXXXXXFLDELAPADVASXXXXXXXXXXFAARGRKLLKRIS-RSGAT--------DSTNVGTSG 270
            +RSNSLP +    G      RP WW ++S  +   E+EMEPEPYPPNLE+GV  KVRK+SMAG++EIRRLYVRGDTIELVNPEKRMFRSQSKIFPLSELTAVVAQGERSLSLSLG+KGLHLTLADRATKE+LWEHLRKMREQAREQAKASR+TRA+SID I S  +D+KSKKK  +FKRSQSYNDA+ +                   FL ++ P D              AARGRK L RIS R+G+T        D+ +VG  G
Sbjct:    1 MRSNSLPMSSGTDG------RP-WWENSSSGSGVVEEEMEPEPYPPNLERGV--KVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKIFPLSELTAVVAQGERSLSLSLGAKGLHLTLADRATKEYLWEHLRKMREQAREQAKASRITRAASIDMIGSASQDLKSKKKIGLFKRSQSYNDASRMPRGRSYNEEDDYDDDGDEDFLADIPPGD-GRGGGLRAGGGRLAARGRKFLMRISTRTGSTSGNKRSRRDANDVGEDG 256
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BLAST of mRNA_H-paniculata_contig379.9943.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 1.330e-61
Identity = 128/169 (75.74%), Postives = 144/169 (85.21%), Query Frame = 0 
Query:   17 IRSNSLPAAVNPSGGDAPTNRPNWWGDNSDTTPAAEDEMEPEPYPPNLEKGVSVKVRKKSMAGRTEIRRLYVRGDTIELVNPEKRMFRSQSKIFPLSELTAVVAQGERSLSLSLGSKGLHLTLADRATKEFLWEHLRKMREQAREQAKASRLTRASSIDHI-SMGEDMK 184
            +RSNSLP +    G      RP WW ++S  +   E+EMEPEPYPPNLE+GV  KVRK+SMAG++EIRRLYVRGDTIELVNPEKRMFRSQSK+FPLSELTAVVAQGERSLSLSLG+KGLHLTLADRATKE+LWEHLRKMREQAREQAKASR+TRA+SID I S  +D K
Sbjct:    1 MRSNSLPMSSGTDG------RP-WWENSSSGSGVVEEEMEPEPYPPNLERGV--KVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKVFPLSELTAVVAQGERSLSLSLGAKGLHLTLADRATKEYLWEHLRKMREQAREQAKASRITRAASIDMIGSASQDFK 160
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig379.9943.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LG27_9PHAE3.620e-7261.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRB0_ECTSI1.330e-6175.74NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig379contigH-paniculata_contig379:6191..18219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig379.9943.1mRNA_H-paniculata_contig379.9943.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig379 6189..18219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig379.9943.1 ID=prot_H-paniculata_contig379.9943.1|Name=mRNA_H-paniculata_contig379.9943.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=469bp
GGGGGAVRQVGKTWKFIRSNSLPAAVNPSGGDAPTNRPNWWGDNSDTTPA
AEDEMEPEPYPPNLEKGVSVKVRKKSMAGRTEIRRLYVRGDTIELVNPEK
RMFRSQSKIFPLSELTAVVAQGERSLSLSLGSKGLHLTLADRATKEFLWE
HLRKMREQAREQAKASRLTRASSIDHISMGEDMKSKKKRMFKRSQSYNDA
AVAAVAAAGAGDSDMDENDKDFLDELAPADVASASGSGGGSGSFAARGRK
LLKRISRSGATDSTNVGTSGEGGGGGRGEYHNADGIRQSGENGKRATDRS
GGAGGSGESKKDGEGRGEGGSGGTGSPEEDWSDSESLDSGDDDDDDDDDD
SEEDSVDDDDDDDNDDDVPECEENERLSPETTAVRLTTNTSAAATATARL
PPPLESCRSKSPSSSSSSGADRGVGSGGGGSSWSPPKPKQQSTAPETEIA
VSEPRSGAAAVSSGSLKGE
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