prot_H-paniculata_contig3781.9929.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3781.9929.1
Unique Nameprot_H-paniculata_contig3781.9929.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length688
Homology
BLAST of mRNA_H-paniculata_contig3781.9929.1 vs. uniprot
Match: D7FMV2_ECTSI (Similar to kinesin-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV2_ECTSI)

HSP 1 Score: 367 bits (941), Expect = 7.320e-107
Identity = 267/679 (39.32%), Postives = 356/679 (52.43%), Query Frame = 0
Query:  100 GSGVEGSRTAGPATPASNSRLSIEEDLVRINAGGEFGPTGRVP--------------------------TSIANGEPGASPLRQRGLSITSIGSTNLSSTEGMNLGAE-ELQLSSSNQTTLHSPGGVLIAGFAPHDGDVA-------------------------GGAGAIRLRRGMSRLPGHILIAPAAGSGVGIGPAFSSRDLQGSTTGLQQPGIRCGSHVLWLWSILGVRAVSFCFSLLLSPRGSRSAIRFGSTELPYSGGLSLLHHRDGANGDKILLELASSPGRIVGDSLGRWAVGAVTEQGPT-------ATLHIVA---LPKTNTNPGNTAQAESVALPSASLLVESQAPGAAVIQLLR----SSVPHIPE-----DNAVVFTSRYSGAVSQQPDLYRHWVLSQM--GRE----SAPALPWTDSTARSPSWRGGLILAHVIG-GSENGWRSGLGAV-------------ASATDNANEISSVQITAIFGEDGRSGFGTGSTGARVTVGGAILVEQVLLLSDEGLVRDVTRFGAQGREEAMDCLRQLEVVNFGWSKEAWRAYDLEPDIHQIGLVAQQARRCFFLQKLNEKKSTPPSLVWKDPLTGRKAVSHSRLLFTLLAAFQHVDSACRFSGETRDDRLQQLETRAEATAERSSMVSERLRTLEAAAETGME 687
            GS  E S   G A   + S +S+EE  + + AGG  G    +P                          +    G  G     ++GL + +IG  N+SSTE + L AE  +Q+SS N T+L+SP G+L++G +P +GD                           GG G   L  G     GH+L+AP AGS    G  FSSR L  +            S +  LWS         CF L     GSRSA+RFG   LPYSGGL + HH +G  GD ++LELASSPGR+VGD+ GRW VGAV +   T       A LH+ A   LP    + G     E    P AS+LVES A  A V+Q+L     SS P +PE     DN +V +SR SG  +Q+   + HWV+SQ+  GR+    SA    W D  A   SW GG+ L HV+  G  +GWR  LG               A A    +   + +    F  +GR+GFG  STGARVTVGGA++ EQVL+LSDEG+VRDV   GAQG  +AM+ +R ++VV FGW+ EA  +Y L+ ++ Q+G++AQQA R        EK+S+  SL W+D  TGRKAVSHSRLL TL+AAFQH+D++ + +G  RD RLQ+LE  + +  E S  VS+RL  +EA A  G++
Sbjct:  953 GSTSESSSKKG-AQDRAGSHISVEESWIHLCAGG--GGDSSLPALSSSRMASXXXXXXXXXXXXXXXXXSGCTGGLGGGEGPSRKGLMVEAIGEANISSTEDLRLRAEGRIQISSPNDTSLYSPRGILLSGSSPRNGDGGXXXXXXXXXXSADHKESPSLDGAGLGGKGHNGLGLGQEE-GGHVLLAPGAGSXXXXGRGFSSRHLASAAAVTSGSAGLPRSMLSLLWSPRAGAQACLCFHL---EEGSRSAVRFGCEGLPYSGGLEVRHHLEGPGGDTLVLELASSPGRVVGDARGRWGVGAVPDADATGAPTQLSAALHVFAAVPLPTVAASSG-LGGGEPTKPPVASVLVESPAGSAGVMQMLSVGGSSSRPSVPELSPAPDNTIVLSSRQSGE-AQEGSTHNHWVVSQLAAGRDKKAGSASRPQWADPQADHSSWAGGMTLTHVVADGGPSGWRPALGTAQQSXXXXXXXXXXAGAPGGDHGGVAARPAVAFSVNGRAGFGACSTGARVTVGGALMAEQVLVLSDEGMVRDVESLGAQGNSQAMEAVRGVDVVTFGWTNEASLSYGLDLEVRQLGIIAQQAER--------EKRSS--SLAWRDVATGRKAVSHSRLLATLVAAFQHLDASIQANGTIRDARLQELERASASAQESSGQVSDRLEAVEAMATRGLD 1612          
BLAST of mRNA_H-paniculata_contig3781.9929.1 vs. uniprot
Match: A0A6H5KPL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPL0_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 1.430e-93
Identity = 234/571 (40.98%), Postives = 313/571 (54.82%), Query Frame = 0
Query:  183 LQLSSSNQTTLHSPGGVLIAGFAPH-----------------------DGDVAGGAGAIRLRRGMSRLPGHILIAPAAGSGVGIGPAFSSRDLQGSTTG-------LQQPGIRCGSH-----------VLWLWSILGVRAVSFCFSLLLSPRGSRSAIRFGSTELPYSGGLSLLHHRDGANGDKILLELASSPGRIVGDSLGRWAVGAVTEQGPT-------ATLHI---VALPKTNTNPGNTAQAESVALPSASLLVESQAPGAAVIQLLR----SSVPHIPE-----DNAVVFTSRYSGAVSQQPDLYRHWVLSQM--GRE----SAPALPWTDSTARSPSWRGGLILAHVIGGSENGWRSGLGAVASATDNANEISSVQITAIFGEDGRSGFGTGSTGARVTVGGAILVEQVLLLSDEGLVRDVTRFGAQGREEAMDCLRQLEVVNFGWSKEAWRAYDLEPDIHQIGLVAQQARRCFFLQKLNEKKSTPPSLVWKDPLTGRKAVSHSRLLFTLLAAFQHVDSACRFSGETRDDRLQQLETRAEATAERSSMVSERLRTLEAAAETGME 687
            +Q+SS N T+L+SP G+L++G +P                        DG   G  G   L  G     GH+L+AP AGSGVGIG  FSSR L  +  G       +        SH           ++ + S  G   VS     +LSPRGS              GGL + HH +G  GD ++LELASSPGR+VGD+ GRW +GAV +   T       A LH+   V+LP T   P      E    P AS+LVES A  A V+Q+L      S P +PE     DN +V +SR+SG  +Q+   + HWV+SQ+  GR+    SA    WTD  A   SW GG+ L HVI GS  G   G+ A  +                FG DGR+GFGT STGARVTVGGA++ EQVL+LSDEG+VRDV   GAQG+ +AM+ +R+++VV FGW+K+A  +Y L+ ++ Q+G++AQQ  R        EK+S   SL W+D  TGRKAVSHSRLL TL+AAFQH+D++ + +G  RD RLQ+LE  + +  E S  +S RL  +EA A+ G++
Sbjct:  993 IQISSPNDTSLYSPRGILLSGSSPRNDGGXXXXXDGTPSADHKESPSLDGAGLGRKGHNGLGLGQEE-GGHVLLAPGAGSGVGIGRGFSSRHLARAAAGTIPTLLYVTNATDHPTSHQRQRMAPSLDALVAMESSGGDAGVS-----VLSPRGS--------------GGLEVRHHLEGPGGDTLVLELASSPGRVVGDARGRWGIGAVPDADATGVPPQLSAALHVFAAVSLP-TVAAPSGLESGEPTMPPVASVLVESPAGSAGVMQMLSVGGSRSRPSVPELSPAPDNTIVLSSRHSGD-TQEGSTHNHWVMSQLAAGRDKKAGSASRPQWTDPQADQSSWAGGMTLTHVIAGSPGGDHGGVAARPAVA--------------FGVDGRAGFGTCSTGARVTVGGALVAEQVLVLSDEGMVRDVDSLGAQGKSQAMEVVREVDVVTFGWTKQASLSYGLDLEVRQLGIIAQQVER--------EKRSA--SLAWRDVATGRKAVSHSRLLATLVAAFQHLDASIQANGIIRDARLQELERASASAQESSEHISNRLGAVEAMAKRGLD 1517          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3781.9929.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMV2_ECTSI7.320e-10739.32Similar to kinesin-related protein n=1 Tax=Ectocar... [more]
A0A6H5KPL0_9PHAE1.430e-9340.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..270
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..290
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 291..688

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3781contigH-paniculata_contig3781:7975..16406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3781.9929.1mRNA_H-paniculata_contig3781.9929.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3781 7975..16406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3781.9929.1 ID=prot_H-paniculata_contig3781.9929.1|Name=mRNA_H-paniculata_contig3781.9929.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=688bp
AAGGPFGGDERLENMGQSDAWQSHNKTLAGGRVKVVPHGVFVEGVSASMT
TSDRIVLQLKERSREIKLPEVTGMSKNEASNPKWTTLPEDEERSRVELNG
SGVEGSRTAGPATPASNSRLSIEEDLVRINAGGEFGPTGRVPTSIANGEP
GASPLRQRGLSITSIGSTNLSSTEGMNLGAEELQLSSSNQTTLHSPGGVL
IAGFAPHDGDVAGGAGAIRLRRGMSRLPGHILIAPAAGSGVGIGPAFSSR
DLQGSTTGLQQPGIRCGSHVLWLWSILGVRAVSFCFSLLLSPRGSRSAIR
FGSTELPYSGGLSLLHHRDGANGDKILLELASSPGRIVGDSLGRWAVGAV
TEQGPTATLHIVALPKTNTNPGNTAQAESVALPSASLLVESQAPGAAVIQ
LLRSSVPHIPEDNAVVFTSRYSGAVSQQPDLYRHWVLSQMGRESAPALPW
TDSTARSPSWRGGLILAHVIGGSENGWRSGLGAVASATDNANEISSVQIT
AIFGEDGRSGFGTGSTGARVTVGGAILVEQVLLLSDEGLVRDVTRFGAQG
REEAMDCLRQLEVVNFGWSKEAWRAYDLEPDIHQIGLVAQQARRCFFLQK
LNEKKSTPPSLVWKDPLTGRKAVSHSRLLFTLLAAFQHVDSACRFSGETR
DDRLQQLETRAEATAERSSMVSERLRTLEAAAETGMEA
back to top