prot_H-paniculata_contig3777.9915.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3777.9915.1
Unique Nameprot_H-paniculata_contig3777.9915.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length201
Homology
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BLAST of mRNA_H-paniculata_contig3777.9915.1 vs. uniprot
Match: D7G1U7_ECTSI (CUE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U7_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 3.910e-46
Identity = 141/206 (68.45%), Postives = 151/206 (73.30%), Query Frame = 0 
Query:    7 EISIEDAVEQLHQMFGDYDKAALAAVLEVHGGHVERTVEHLLNGARGPSASGGSAGGSGRPS---------GIDHDADLALQLSREWSDQPAESMPPPPTIPTGIPSPFDHGVSGXXXXXXXXXXXXXXXXXXXXXXXXXSKXXXXXXXXXXX-------TTDRRGRRVAIPEGFLRVPGWSGGL--EVSSDPQVAADARLAMMLQ 194
            EIS EDAVEQLHQMFGDYDK ALA VLE HGGHVERTVEHLL+    P A+ G                  G DHDA LALQLSREWSD+P  +MPPPP  P GIP+P+  G   XXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXX       + DRRGRRVA+PE FLR PGW+GG   EVSSDPQVAADA+LAMMLQ
Sbjct:    3 EISTEDAVEQLHQMFGDYDKTALANVLEAHGGHVERTVEHLLSN---PQAASGXXXXXXXXXXXXXXXASRGTDHDAALALQLSREWSDEPT-NMPPPPVRPQGIPTPYGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDRRGRRVALPEQFLRTPGWTGGGAGEVSSDPQVAADAKLAMMLQ 204
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3777.9915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1U7_ECTSI3.910e-4668.45CUE domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003892Ubiquitin system component CUEPFAMPF02845CUEcoord: 11..50
e-value: 3.1E-8
score: 33.2
IPR003892Ubiquitin system component CUEPROSITEPS51140CUEcoord: 9..52
score: 12.114
NoneNo IPR availableGENE3D1.10.8.10coord: 2..56
e-value: 6.1E-10
score: 40.5
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 8..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3777contigH-paniculata_contig3777:638..5070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3777.9915.1mRNA_H-paniculata_contig3777.9915.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3777 8..5360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3777.9915.1 ID=prot_H-paniculata_contig3777.9915.1|Name=mRNA_H-paniculata_contig3777.9915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
MAAPSDEISIEDAVEQLHQMFGDYDKAALAAVLEVHGGHVERTVEHLLNG
ARGPSASGGSAGGSGRPSGIDHDADLALQLSREWSDQPAESMPPPPTIPT
GIPSPFDHGVSGGGGGGHVGGALPRGGSGGMQAVVTSSKGNVPRGGGNGG
TTDRRGRRVAIPEGFLRVPGWSGGLEVSSDPQVAADARLAMMLQVYLGGE
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003892CUE
IPR009060UBA-like_sf