prot_H-paniculata_contig37592.9883.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig37592.9883.1
Unique Nameprot_H-paniculata_contig37592.9883.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length213
Homology
BLAST of mRNA_H-paniculata_contig37592.9883.1 vs. uniprot
Match: A0A6H5L269_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L269_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 2.540e-79
Identity = 130/210 (61.90%), Postives = 161/210 (76.67%), Query Frame = 0
Query:    1 ELRSILGSISYLRKFLPALSKEIKELNLLLCHDVPFMFSDRHARIAKTILNHLASPTVLACPDYNAAVDGTRPFQLTTDACKHGLGAVLEQLQPDNTLRPLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYSIKFDAFTDHQPLLNYISLSEKKPKVQRICDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENACRILD 210
            ELRS+LGS+SYLRKFLP L++ I +L  LL  DV F F+  H ++ K +L  LAS  VLA PDY+AA+DGTR F+LTTDA   G GAVLEQ Q D T+RPLVYISR+T  NE NWD + LEC ALVWAI+KLRV+LY I F+AFTDHQPLL++IS+ EKKP+VQR+CD LS + F L Y+ GK NQ+ADALSRLP P T  D + C++++
Sbjct:  303 ELRSMLGSVSYLRKFLPNLARNITDLTALLKKDVHFKFTAHHEQLTKAVLAQLASYEVLAFPDYDAAIDGTRKFRLTTDASISGFGAVLEQPQEDGTVRPLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQRMCDFLSAYSFTLSYRKGKENQVADALSRLPQPPTAADFDKCKLIE 512          
BLAST of mRNA_H-paniculata_contig37592.9883.1 vs. uniprot
Match: A0A6H5KJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH5_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 3.280e-74
Identity = 124/210 (59.05%), Postives = 155/210 (73.81%), Query Frame = 0
Query:    1 ELRSILGSISYLRKFLPALSKEIKELNLLLCHDVPFMFSDRHARIAKTILNHLASPTVLACPDYNAAVDGTRPFQLTTDACKHGLGAVLEQLQPDNTLRPLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYSIKFDAFTDHQPLLNYISLSEKKPKVQRICDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENACRILD 210
            ELRS+LGS+SYLRKF P L++ I +L  LL     F F+  H ++ K +L  L S  VLA PDY AA+DGTR F+LTTDA   G GAVLEQ + D T+RPLVYISR+T  NE NWD + LEC ALVWAI+KLRV+LY I F+AFTDHQPLL++IS+ EKKP+VQ +CD L+ + F L Y+ GK NQ+ADALSRLP P T DD + C+ ++
Sbjct:  154 ELRSMLGSVSYLRKFRPNLARNITDLTALLQKAAHFKFTAHHEQLTKAVLAQLTSYEVLAFPDYAAAIDGTRKFRLTTDASISGSGAVLEQPRDDGTVRPLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQHMCDFLTAYSFTLSYRKGKDNQVADALSRLPQPPTADDFDKCKSIE 363          
BLAST of mRNA_H-paniculata_contig37592.9883.1 vs. uniprot
Match: A0A6H5K8H1_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8H1_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 9.520e-67
Identity = 110/187 (58.82%), Postives = 137/187 (73.26%), Query Frame = 0
Query:    1 ELRSILGSISYLRKFLPALSKEIKELNLLLCHDVPFMFSDRHARIAKTILNHLASPTVLACPDYNAAVDGTRPFQLTTDACKHGLGAVLEQLQPDNTLRPLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYSIKFDAFTDHQPLLNYISLSEKKPKVQRICDILSQFQFNLRYKPGKRNQL 187
            ELRS+LGS+SYLRKFLP L++ I +L  LL  D  F F+  H ++ K +L  LAS  VLA PDY AA+DGTR F+LTTDA   G GAVLEQ Q D T+ PLVY+SR+T  NE NWD + LEC ALVWAI+KLR  LY I F+AFTDH+PLL++ S+ EKKP+VQR+ D LS + F L Y+ GK N++
Sbjct:  275 ELRSMLGSVSYLRKFLPNLARNITDLTALLEKDAHFKFTAHHEQLTKAVLAQLASYEVLAFPDYAAAIDGTRKFRLTTDASISGFGAVLEQPQEDGTVSPLVYVSRSTLPNEANWDVSSLECGALVWAIRKLRDCLYGIPFEAFTDHKPLLSFFSMGEKKPRVQRMGDFLSAYSFTLSYRKGKDNRM 461          
BLAST of mRNA_H-paniculata_contig37592.9883.1 vs. uniprot
Match: A0A6H5JJN6_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN6_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.380e-61
Identity = 103/214 (48.13%), Postives = 144/214 (67.29%), Query Frame = 0
Query:    1 ELRSILGSISYLRKFLPALSKEIKELNLLLCHDVPFMFSDRHARIAKTILNHLASPTVLACPDYNAAVDGTRPFQLTTDACKHGLGAVLEQLQPDNTLRPLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYSIKFDAFTDHQPLLNYISLSEKKPKVQRICDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENA-CRILDPQE 213
            +LRS+LGS+SY RKFL  +S ++K +N +L     F F+  H  + + +++ L+ PTVLA P Y  A+ G RPF+LT DA   GLGAV+EQ Q D ++RPL ++SR+T  NE  W  T+LE  A+VWAIKK R   Y I F+ ++DHQPL N  SL+EK  +VQR  D LS + + L+Y+PG+ N  AD +SRLP+PAT++DE    R+ DP +
Sbjct:   53 QLRSLLGSLSYYRKFLKNMSAKLKPINAMLKKGEKFAFTADHVAVVRKMMDILSGPTVLAFPCYEGAISGERPFRLTADASISGLGAVIEQEQRDGSIRPLCFLSRSTFPNETRWSPTELEAGAIVWAIKKNRTLFYGIPFEVYSDHQPLRNLGSLAEKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDPSD 266          
BLAST of mRNA_H-paniculata_contig37592.9883.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 1.490e-61
Identity = 108/214 (50.47%), Postives = 143/214 (66.82%), Query Frame = 0
Query:    1 ELRSILGSISYLRKFLPALSKEIKELNLLLCHDVPFMFSDRHARIAKTILNHLASPTVLACPDYNAAVDGTRPFQLTTDACKHGLGAVLEQLQPDNTLRPLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYSIKFDAFTDHQPLLNYISLSEKKPKVQRICDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENA-CRILDPQE 213
            +LRSILGS+SY RKFL  +S ++  +  LL  D  F F+ +HA + + + + L+SP VLA PDY  A+ G R F+L TDA   GLGAV+EQ Q D T+RPL Y+SR+T  NE+ W AT+LEC A+VWAIKK R   Y I F  ++DHQPL N  SL+EK  +VQR  D LS + + L Y+PGK N  AD +SRLP+P  E+D +   R+ DP +
Sbjct:  208 QLRSILGSLSYYRKFLKGMSAKLHSVTALLKKDAKFAFTAKHAEVIQEMKDKLSSPEVLAFPDYEGAITGKRKFRLITDASISGLGAVIEQEQEDGTVRPLCYLSRSTYPNERRWSATELECGAIVWAIKKNRTLFYGIPFQIYSDHQPLRNLESLAEKNNRVQRWFDFLSAYTYELIYRPGKANGNADCMSRLPLPPMEEDASPEMRLTDPSD 421          
BLAST of mRNA_H-paniculata_contig37592.9883.1 vs. uniprot
Match: A0A6H5KAM4_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM4_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 2.100e-60
Identity = 103/214 (48.13%), Postives = 144/214 (67.29%), Query Frame = 0
Query:    1 ELRSILGSISYLRKFLPALSKEIKELNLLLCHDVPFMFSDRHARIAKTILNHLASPTVLACPDYNAAVDGTRPFQLTTDACKHGLGAVLEQLQPDNTLRPLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYSIKFDAFTDHQPLLNYISLSEKKPKVQRICDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENA-CRILDPQE 213
            +LRS+LGS+SY RKFL  +S ++K +N +L     F F+  H  + + +++ L+ PTVLA P Y  A+ G RPF+LT DA   GLGAV+EQ Q D ++RPL ++SR+T  NE  W  T+LE  A+VWAIKK R   Y I F+ ++DHQPL N  SL+EK  +VQR  D LS + + L+Y+PG+ N  AD +SRLP+PAT++DE    R+ DP +
Sbjct:   53 QLRSLLGSLSYYRKFLKNMSAKLKPINAMLKKGEKFAFTADHVAVVRKMMDILSGPTVLAFPCYEGAISGERPFRLTADASISGLGAVIEQEQRDGSIRPLCFLSRSTFPNETRWSPTELEAGAIVWAIKKNRTLFYGIPFEVYSDHQPLRNLGSLAEKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDPSD 266          
BLAST of mRNA_H-paniculata_contig37592.9883.1 vs. uniprot
Match: A0A6H5JWR4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR4_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 2.790e-57
Identity = 102/214 (47.66%), Postives = 143/214 (66.82%), Query Frame = 0
Query:    1 ELRSILGSISYLRKFLPALSKEIKELNLLLCHDVPFMFSDRHARIAKTILNHLASPTVLACPDYNAAVDGTRPFQLTTDACKHGLGAVLEQLQPDNTLRPLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYSIKFDAFTDHQPLLNYISLSEKKPKVQRICDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENA-CRILDPQE 213
            +LRS+LGS+SY RKFL  +S ++K +N +L     F F+  H  + + +++ L+ PTVLA P Y  A+ G RPF+LT DA   GLGAV+EQ Q D ++RPL ++SR+T  NE  W  T LE  A+VWAIK+ R   Y I F+ ++DHQPL N  SL+EK  +VQR  D LS + + L+Y+PG+ N  AD +SRLP+PAT++DE    R+ DP +
Sbjct:   53 QLRSLLGSLSYYRKFLKNMSAKLKPINAMLKKGEKFAFTADHVAVVRKMMDILSGPTVLAFPCYEGAISGERPFRLTADASISGLGAVIEQEQRDGSIRPLCFLSRSTFPNETRWSPTKLEAGAIVWAIKQNRTLFYGIPFEVYSDHQPLRNLGSLAEKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDPSD 266          
BLAST of mRNA_H-paniculata_contig37592.9883.1 vs. uniprot
Match: A0A6H5KKY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY6_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 4.270e-56
Identity = 97/168 (57.74%), Postives = 120/168 (71.43%), Query Frame = 0
Query:   33 DVPFMFSDRHARIAKTILNHLASPTVLACPDYNAAVDGTRPFQLTTDACKHGLGAVLEQLQPDNTLRPLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYSIKFDAFTDHQPLLNYISLSEKKPKVQRICDILSQFQFNLRYKPGKRNQLADALSRLPVPATE 200
            D  F F+ +H    + IL  L S T LA  DY AA++G+RPFQL++DA  HG+GAV+EQ + D T+RPLVY+SR+T  NE+NWD  DL   AL W +KKLRV+ Y I F   TDHQPL  Y+SLSEKKP+V  +CD LS +QF+LRYK G  NQ+AD LSRLP PATE
Sbjct: 1244 DKEFRFTTQHEETTRAILKTLMSTTTLAFLDYEAAINGSRPFQLSSDASVHGVGAVVEQQRNDGTMRPLVYVSRSTLPNERNWDTADLGMGALFWVVKKLRVYSYGIPFVVHTDHQPLTAYLSLSEKKPRVHGMCDFLSSYQFSLRYKKGNDNQVADMLSRLPQPATE 1411          
BLAST of mRNA_H-paniculata_contig37592.9883.1 vs. uniprot
Match: A0A6H5JGN7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN7_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 2.520e-53
Identity = 94/210 (44.76%), Postives = 134/210 (63.81%), Query Frame = 0
Query:    1 ELRSILGSISYLRKFLPALSKEIKELNLLLCHDVPFMFSDRHARIAKTILNHLASPTVLACPDYNAAVDGTRPFQLTTDACKHGLGAVLEQLQPDNTLRPLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYSIKFDAFTDHQPLLNYISLSEKKPKVQRICDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENACRILD 210
            +LRS+LG +SY RKFL  L+ +++ LN LL   VPF ++    ++ KT+L+ LA P +L  PD+ A  D +RP +L +DAC  G GA LEQ Q D ++RP+VYISR T   E+NW   DLE   +VWAIK+LR +L+S KF  ++DH+ L +   + E   +VQR  + LS F + L+Y+ G  N  AD LSRLP+PA + D+     +D
Sbjct:  175 QLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVKVVKTLLSELARPPILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCID 384          
BLAST of mRNA_H-paniculata_contig37592.9883.1 vs. uniprot
Match: A0A6H5L6U8_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U8_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 2.310e-52
Identity = 91/210 (43.33%), Postives = 132/210 (62.86%), Query Frame = 0
Query:    1 ELRSILGSISYLRKFLPALSKEIKELNLLLCHDVPFMFSDRHARIAKTILNHLASPTVLACPDYNAAVDGTRPFQLTTDACKHGLGAVLEQLQPDNTLRPLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYSIKFDAFTDHQPLLNYISLSEKKPKVQRICDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENACRILD 210
            +LRS+LG +SY RKFL  L+ +++ LN LL   V F ++    ++ KT+L+ L  P +L  PD+ A  D +RP +L +DAC  G GA LEQ Q D ++RP+VYISR T   E+NW   DLE   +VWAIK+LR +L+S KF  ++DH+ L +   + E   +VQR  + LS F + L+Y+ G  N  AD LSR+P+PA + D+     +D
Sbjct:   60 QLRSLLGGLSYYRKFLKNLATKVRPLNALLKQGVLFKYTPSMIKVVKTLLSELTCPPILVFPDWAAVEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFVIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRMPLPAQDTDKTGQDCID 269          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37592.9883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L269_9PHAE2.540e-7961.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH5_9PHAE3.280e-7459.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8H1_9PHAE9.520e-6758.82RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JJN6_9PHAE1.380e-6148.13RT_RNaseH domain-containing protein (Fragment) n=1... [more]
A0A6H5KRW3_9PHAE1.490e-6150.47Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KAM4_9PHAE2.100e-6048.13RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JWR4_9PHAE2.790e-5747.66Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KKY6_9PHAE4.270e-5657.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGN7_9PHAE2.520e-5344.76Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L6U8_9PHAE2.310e-5243.33RT_RNaseH domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.370coord: 60..180
e-value: 1.9E-46
score: 160.3
NoneNo IPR availableGENE3D3.30.70.270coord: 1..193
e-value: 1.9E-46
score: 160.3
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 37..203
NoneNo IPR availablePANTHERPTHR24559:SF275coord: 37..203
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..180
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 71..173
e-value: 7.5E-28
score: 96.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37592contigH-paniculata_contig37592:1482..2120 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37592.9883.1mRNA_H-paniculata_contig37592.9883.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig37592 1482..2120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig37592.9883.1 ID=prot_H-paniculata_contig37592.9883.1|Name=mRNA_H-paniculata_contig37592.9883.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp
ELRSILGSISYLRKFLPALSKEIKELNLLLCHDVPFMFSDRHARIAKTIL
NHLASPTVLACPDYNAAVDGTRPFQLTTDACKHGLGAVLEQLQPDNTLRP
LVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYSIKFDAFTDHQPL
LNYISLSEKKPKVQRICDILSQFQFNLRYKPGKRNQLADALSRLPVPATE
DDENACRILDPQE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH