prot_H-paniculata_contig37355.9842.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig37355.9842.1
Unique Nameprot_H-paniculata_contig37355.9842.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length54
Homology
BLAST of mRNA_H-paniculata_contig37355.9842.1 vs. uniprot
Match: A0A6H5KIG1_9PHAE (Rtt106 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIG1_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 7.080e-15
Identity = 36/46 (78.26%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 SFVKCYHGVNEGSLFPLPQGLLFMKPGLFLPREDIGEVRTNEGRGA 46
            SFVKCYHGVNEGSLFPL QGLLFMKP LFLPR DI EV    G  A
Sbjct:  221 SFVKCYHGVNEGSLFPLKQGLLFMKPALFLPRADIQEVVCGRGGSA 266          
BLAST of mRNA_H-paniculata_contig37355.9842.1 vs. uniprot
Match: B8CDZ5_THAPS (Rtt106 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDZ5_THAPS)

HSP 1 Score: 60.5 bits (145), Expect = 2.590e-9
Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    2 FVKCYHGVNEGSLFPLPQGLLFMKPGLFLPREDIGEVRTNEGRG 45
            FV CYHG+N+G+LFPL +GLLF KP LF+PR  +  +    G G
Sbjct:  298 FVGCYHGMNDGALFPLREGLLFFKPPLFVPRSKLASISCGRGSG 341          
BLAST of mRNA_H-paniculata_contig37355.9842.1 vs. uniprot
Match: B7FW81_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FW81_PHATC)

HSP 1 Score: 57.4 bits (137), Expect = 3.160e-8
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    2 FVKCYHGVNEGSLFPLPQGLLFMKPGLFLPREDIGEVRTNEG 43
            FVKCYHGV++G L+PL +GLLF KP  F+PR+ +  +    G
Sbjct:  302 FVKCYHGVHDGVLYPLREGLLFFKPPCFVPRQKLASIACGRG 343          
BLAST of mRNA_H-paniculata_contig37355.9842.1 vs. uniprot
Match: A0A7R9WJN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJN6_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 8.920e-8
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0
Query:    2 FVKCYHGVNEGSLFPLPQGLLFMKPGLFLPREDIGEVRTNEGRGAGG 48
            +VKCYHGVN+G ++PL  GLLF KP LF+ R  +  +    G  + G
Sbjct:   74 YVKCYHGVNDGVVYPLEAGLLFFKPPLFVHRSKLHSISCGRGSSSSG 120          
BLAST of mRNA_H-paniculata_contig37355.9842.1 vs. uniprot
Match: A0A7R9U489_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U489_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 7.240e-7
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 0
Query:    1 SFVKCYHGVNEGSLFPLPQGLLFMKPGLFLPREDIGEVRTNEGRGAGG 48
            S+V C+HGV +G L+PL +GLLF KP LF+   DI  +    G   GG
Sbjct:  222 SYVSCFHGVKDGHLWPLSEGLLFAKPPLFVSESDILGISCGRGGSTGG 269          
BLAST of mRNA_H-paniculata_contig37355.9842.1 vs. uniprot
Match: A0A7S1V7D1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V7D1_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 8.820e-6
Identity = 20/42 (47.62%), Postives = 25/42 (59.52%), Query Frame = 0
Query:    2 FVKCYHGVNEGSLFPLPQGLLFMKPGLFLPREDIGEVRTNEG 43
            F+ CYHGV +G LFPL +G+LF KP  F PR     +    G
Sbjct:  127 FLACYHGVKDGVLFPLKEGILFTKPPTFWPRSIFSSIACGRG 168          
BLAST of mRNA_H-paniculata_contig37355.9842.1 vs. uniprot
Match: A0A7S1U891_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U891_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 4.240e-5
Identity = 20/45 (44.44%), Postives = 26/45 (57.78%), Query Frame = 0
Query:    3 VKCYHGVNEGSLFPLPQGLLFMKPGLFLPREDIGEVRTNEGRGAG 47
            V CY GV +G L+PLP G+LF+KP  FL   D+  +    G   G
Sbjct:  219 VSCYSGVKDGDLWPLPSGVLFLKPPRFLSESDVVGIACGRGGATG 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37355.9842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KIG1_9PHAE7.080e-1578.26Rtt106 domain-containing protein n=1 Tax=Ectocarpu... [more]
B8CDZ5_THAPS2.590e-954.55Rtt106 domain-containing protein n=1 Tax=Thalassio... [more]
B7FW81_PHATC3.160e-852.38Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7R9WJN6_9STRA8.920e-846.81Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7R9U489_9STRA7.240e-747.92FACT complex subunit SSRP1 n=1 Tax=Pinguiococcus p... [more]
A0A7S1V7D1_9STRA8.820e-647.62Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1U891_9STRA4.240e-544.44Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 2..41
e-value: 2.1E-8
score: 34.5
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..43
e-value: 3.9E-6
score: 28.8
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 2..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37355contigH-paniculata_contig37355:1764..1925 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37355.9842.1mRNA_H-paniculata_contig37355.9842.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig37355 1764..1925 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig37355.9842.1 ID=prot_H-paniculata_contig37355.9842.1|Name=mRNA_H-paniculata_contig37355.9842.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=54bp
SFVKCYHGVNEGSLFPLPQGLLFMKPGLFLPREDIGEVRTNEGRGAGGGG
VLM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013719DUF1747
IPR011993PH-like_dom_sf