prot_H-paniculata_contig37337.9839.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig37337.9839.1
Unique Nameprot_H-paniculata_contig37337.9839.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length123
Homology
BLAST of mRNA_H-paniculata_contig37337.9839.1 vs. uniprot
Match: A0A5N5G5U8_9ROSA (Uncharacterized protein n=4 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5G5U8_9ROSA)

HSP 1 Score: 114 bits (284), Expect = 5.770e-30
Identity = 53/121 (43.80%), Postives = 86/121 (71.07%), Query Frame = 0
Query:    1 AISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGSRGSTTLFEDNKSAINISKGSGAHCRTKHIGLRWHGIREWVREGILALKYVQTGDQLADILTKGLSRVQFQRLRILL 121
            A+SW S+KQQ+VT S+TEAE+VAA     + ++LR +LG +G+  + ST ++ DN SAI +S+    H R+KHI +R+H +R+  +EG++ L Y ++ DQ+AD++TK L +  F++LR +L
Sbjct:    5 AVSWSSKKQQIVTLSTTEAEFVAAASCSCQAIWLRRMLGVLGYQQQDSTLIYCDNVSAIKLSRNPVMHGRSKHIDVRYHFLRDLCKEGVIELHYCKSEDQVADLMTKPLKQPAFEKLRSML 125          
BLAST of mRNA_H-paniculata_contig37337.9839.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY)

HSP 1 Score: 115 bits (288), Expect = 2.430e-29
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 0
Query:    1 AISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGSRGSTTLFEDNKSAINISKGSGAHCRTKHIGLRWHGIREWVREGILALKYVQTGDQLADILTKGLSRVQFQRLR 118
            AI+WCSR+QQ  + S+TEAEYVAA EA KE ++LR LL  I   S  +  L+ DN+SAI + K    H RTKHI +R+H I+E  + G + ++YV++ DQLADILTK L  V+F +LR
Sbjct:  130 AITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPLVSVKFNKLR 247          
BLAST of mRNA_H-paniculata_contig37337.9839.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF)

HSP 1 Score: 116 bits (290), Expect = 7.490e-29
Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 0
Query:    1 AISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGSRGSTTLFEDNKSAINISKGSGAHCRTKHIGLRWHGIREWVREGILALKYVQTGDQLADILTKGLSRVQFQRLR 118
            A+SW S+KQ +VT S+TEAEYVAA     + V++R +L  IGFG    T LF DN SAI +SK    H R+KHI +R+H +RE V EGI++ +Y  T +QLADI+TK +    F++LR
Sbjct:  217 AVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADIMTKPVKLEVFEKLR 334          
BLAST of mRNA_H-paniculata_contig37337.9839.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT)

HSP 1 Score: 117 bits (293), Expect = 2.350e-28
Identity = 61/120 (50.83%), Postives = 82/120 (68.33%), Query Frame = 0
Query:    2 ISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGSRGSTTLFEDNKSAINISKGSGAHCRTKHIGLRWHGIREWVREGILALKYVQTGDQLADILTKGLSRVQFQRLRILL 121
            +SWCS+KQ  VT S+TEAEYVA  +A +E +++R LL  IG  S   TT++EDN+ AI ISK +  H RTKHI +R+H +RE V    + + Y  T   LADI+TKGL++  FQRLR +L
Sbjct:  411 VSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 530          
BLAST of mRNA_H-paniculata_contig37337.9839.1 vs. uniprot
Match: A0A8H7CY76_9AGAR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H7CY76_9AGAR)

HSP 1 Score: 115 bits (287), Expect = 2.980e-28
Identity = 59/121 (48.76%), Postives = 81/121 (66.94%), Query Frame = 0
Query:    1 AISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGSRGSTTLFEDNKSAINISKGSGAHCRTKHIGLRWHGIREWVREGILALKYVQTGDQLADILTKGLSRVQFQRLRILL 121
            AISW S+KQ +VT SSTE+EYVA   A KE ++LR+LL  +     G TTLF DN+ AI +S+ S  H RTKHI +R+H IR+ +R G  ++ Y  T D +AD+ TK L+R + ++ R LL
Sbjct:  239 AISWSSKKQPIVTLSSTESEYVALTHASKELIWLRKLLSELRLLPTGPTTLFCDNQGAIVLSRDSTYHARTKHIDIRFHFIRQTIRHGHASVTYCSTHDMIADVFTKSLTRAKIEKFRDLL 359          
BLAST of mRNA_H-paniculata_contig37337.9839.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT)

HSP 1 Score: 116 bits (291), Expect = 7.750e-28
Identity = 61/120 (50.83%), Postives = 82/120 (68.33%), Query Frame = 0
Query:    2 ISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGSRGSTTLFEDNKSAINISKGSGAHCRTKHIGLRWHGIREWVREGILALKYVQTGDQLADILTKGLSRVQFQRLRILL 121
            +SWCS+KQ  VT S+TEAEYVA  +A +E +++R LL  IG  S   TT++EDN+ AI ISK +  H RTKHI +R+H +RE V    + + Y  T   LADI+TKGL++  FQRLR +L
Sbjct: 1156 VSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRGLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 1275          
BLAST of mRNA_H-paniculata_contig37337.9839.1 vs. uniprot
Match: A0A1X7SFX4_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SFX4_AMPQE)

HSP 1 Score: 109 bits (273), Expect = 1.140e-27
Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 0
Query:    1 AISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGSRGSTTLFEDNKSAINISKGSGAHCRTKHIGLRWHGIREWVREGILALKYVQTGDQLADILTKGLSRVQFQRLRIL 120
            A+SW S++Q  V  S+ EAEY+A     +E V++REL   +     G TT+FEDN+SAI+++K    H R KHIG+++H IRE V    + +KY +T D +ADI TKGL+  +F+RLR L
Sbjct:   57 AVSWKSKRQDCVALSTAEAEYMALASTAQEAVWMRELNADMNNKPNGPTTIFEDNQSAISMAKNPQFHGRAKHIGIKYHFIREQVSTESVQIKYCRTEDMVADIFTKGLTHEKFERLRSL 176          
BLAST of mRNA_H-paniculata_contig37337.9839.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM)

HSP 1 Score: 115 bits (288), Expect = 1.950e-27
Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = 0
Query:    1 AISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGSRGSTTLFEDNKSAINISKGSGAHCRTKHIGLRWHGIREWVREGILALKYVQTGDQLADILTKGLSRVQFQR 116
            A+SW S+KQ     SSTEAEY+AA  A KE  +LR  LG IG   + +T L  DN+SA+ I++    H RTKHI +R+H +RE V  G + L+YV TGDQ+AD+LTKGL + +  +
Sbjct: 1012 AVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAKHDK 1127          
BLAST of mRNA_H-paniculata_contig37337.9839.1 vs. uniprot
Match: A0A1J3D358_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D358_NOCCA)

HSP 1 Score: 114 bits (285), Expect = 2.320e-27
Identity = 56/118 (47.46%), Postives = 79/118 (66.95%), Query Frame = 0
Query:    1 AISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGSRGSTTLFEDNKSAINISKGSGAHCRTKHIGLRWHGIREWVREGILALKYVQTGDQLADILTKGLSRVQFQRLR 118
            A++W SRKQ +VT SSTEAEYVAA     + ++++ +LG IGF      TLF DN S I +SK +  H ++KHI +R+H +RE  +EG++ L +  T +QLADI+TK L    FQR+R
Sbjct:  365 AVAWSSRKQPIVTLSSTEAEYVAAATCACQAIWMKRVLGEIGFEQEDGMTLFCDNTSTIKLSKNAVMHGKSKHIRVRYHFLRELSKEGLVTLVHCNTEEQLADIMTKPLKMASFQRIR 482          
BLAST of mRNA_H-paniculata_contig37337.9839.1 vs. uniprot
Match: A0A6S7H8C9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H8C9_PARCT)

HSP 1 Score: 115 bits (287), Expect = 2.620e-27
Identity = 60/120 (50.00%), Postives = 81/120 (67.50%), Query Frame = 0
Query:    2 ISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGSRGSTTLFEDNKSAINISKGSGAHCRTKHIGLRWHGIREWVREGILALKYVQTGDQLADILTKGLSRVQFQRLRILL 121
            +SWCS+KQ  VT S+TEAEYVA  +A +E +++R LL  IG  S   TT++EDN+ AI  SK +  H RTKHI +R+H +RE V    + + Y  T   LADI+TKGL++  FQRLR +L
Sbjct:  759 VSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIESSKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 878          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37337.9839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5N5G5U8_9ROSA5.770e-3043.80Uncharacterized protein n=4 Tax=Pyrus ussuriensis ... [more]
A0A1Y1N3K4_PHOPY2.430e-2951.69Uncharacterized protein n=2 Tax=Photinus pyralis T... [more]
UPI0006A737CF7.490e-2950.00uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A7D9JFU5_PARCT2.350e-2850.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H7CY76_9AGAR2.980e-2848.76Retrovirus-related Pol polyprotein from transposon... [more]
A0A7D9DPP1_PARCT7.750e-2850.83Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A1X7SFX4_AMPQE1.140e-2745.83Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A4Y9ZY34_9AGAM1.950e-2749.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A1J3D358_NOCCA2.320e-2747.46Retrovirus-related Pol polyprotein from transposon... [more]
A0A6S7H8C9_PARCT2.620e-2750.00Retrovirus-related Pol poly from transposon TNT 1-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..114
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 2..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37337contigH-paniculata_contig37337:2..370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37337.9839.1mRNA_H-paniculata_contig37337.9839.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig37337 2..827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig37337.9839.1 ID=prot_H-paniculata_contig37337.9839.1|Name=mRNA_H-paniculata_contig37337.9839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp
AISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGSRGSTT
LFEDNKSAINISKGSGAHCRTKHIGLRWHGIREWVREGILALKYVQTGDQ
LADILTKGLSRVQFQRLRILLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like