prot_H-paniculata_contig37328.9835.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig37328.9835.1
Unique Nameprot_H-paniculata_contig37328.9835.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length205
Homology
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BLAST of mRNA_H-paniculata_contig37328.9835.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 1.570e-11
Identity = 48/139 (34.53%), Postives = 65/139 (46.76%), Query Frame = 0 
Query:   64 GVLRNQADAAVRIPSHAVLLPPRQDESQVLTEKEREKRNWTERLKTWHSTGKKAG-------------------KGRATKEFRLFFLCGHDYSLAECGLEGKGYRIETLRKWVKNCVPFAKALLVVVSVTLKSFAGLSI 183
            GV R  A     IP    +LP R      L+E +R    W+  LK W ++   A                    +G  T+E RLFFLCG D SLAECG +G+GY ++    WV+   P AK  L + S+ LK   GL++
Sbjct:  878 GVAREVAILRWPIPRFVCVLPARDTR---LSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAV 1013
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37328.9835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUH6_ECTSI1.570e-1134.53LRR-GTPase of the ROCO family, incomplete sequence... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37328contigH-paniculata_contig37328:446..1464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37328.9835.1mRNA_H-paniculata_contig37328.9835.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig37328 446..1464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig37328.9835.1 ID=prot_H-paniculata_contig37328.9835.1|Name=mRNA_H-paniculata_contig37328.9835.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
GNASSTDSRAACSHADSEGLDQIREKRRIRQPFTTTVEERTLEITAMMEE
QMKMMTRVSAQVRGVLRNQADAAVRIPSHAVLLPPRQDESQVLTEKEREK
RNWTERLKTWHSTGKKAGKGRATKEFRLFFLCGHDYSLAECGLEGKGYRI
ETLRKWVKNCVPFAKALLVVVSVTLKSFAGLSIPIEEIAGVDDQLWDKPV
SSMVE
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