prot_H-paniculata_contig3729.9828.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3729.9828.1
Unique Nameprot_H-paniculata_contig3729.9828.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length148
Homology
BLAST of mRNA_H-paniculata_contig3729.9828.1 vs. uniprot
Match: D8LEA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA4_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 1.690e-80
Identity = 132/149 (88.59%), Postives = 136/149 (91.28%), Query Frame = 0
Query:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRWVMLFFAGILVVSSANLMMEK-EEDHGDSSQLENNTVLKIAKWMCDSTDYYDGEKFFTMVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLGISQDTFIVYASNV 148
            MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFR VML FAGILVVSS  L+ME  EEDH DSS LE N VL++A WM DSTDYYDGEKFFT+VDGAKKATPLLLCLICIEMTDFVFAVDSIPAVL ISQDTFIVYASNV
Sbjct:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSFKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNV 149          
BLAST of mRNA_H-paniculata_contig3729.9828.1 vs. uniprot
Match: A0A6H5JWN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN8_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 1.470e-78
Identity = 132/149 (88.59%), Postives = 136/149 (91.28%), Query Frame = 0
Query:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRWVMLFFAGILVVSSANLMMEK-EEDHGDSSQLENNTVLKIAKWMCDSTDYYDGEKFFTMVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLGISQDTFIVYASNV 148
            MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFR VML FAGILVVSS  L+ME  EEDH DSS LE N VL++A WM DSTDYYDGEKFFT+VDGAKKATPLLLCLICIEMTDFVFAVDSIPAVL ISQDTFIVYASNV
Sbjct:  188 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRGVMLVFAGILVVSSLKLLMEGVEEDHADSSALEGNMVLRVANWMMDSTDYYDGEKFFTLVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLAISQDTFIVYASNV 336          
BLAST of mRNA_H-paniculata_contig3729.9828.1 vs. uniprot
Match: A0A835ZA94_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA94_9STRA)

HSP 1 Score: 208 bits (529), Expect = 5.310e-65
Identity = 107/148 (72.30%), Postives = 126/148 (85.14%), Query Frame = 0
Query:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRWVMLFFAGILVVSSANLMMEKEEDHGDSSQLENNTVLKIAKWMCDSTDYYDGEKFFTMVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLGISQDTFIVYASNV 148
            MLF+YFKVPA +Q RVL WGIIGAVSMRA+MIVVGVAAIQRFR V+L FA IL+ SS  L+ EKE++ GD   L NN VL+I+K+   STD Y+GEKFFT+VDG K ATPLLLCL+CIE++DFVFAVDSIPAVLG+S+DTFIVY+SNV
Sbjct:   44 MLFEYFKVPAAYQGRVLTWGIIGAVSMRAVMIVVGVAAIQRFRGVILAFAAILLASSVKLLTEKEDEDGD---LSNNIVLRISKFFVRSTDKYEGEKFFTVVDGKKMATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDTFIVYSSNV 188          
BLAST of mRNA_H-paniculata_contig3729.9828.1 vs. uniprot
Match: A0A7S1UHU3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHU3_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.320e-58
Identity = 93/148 (62.84%), Postives = 121/148 (81.76%), Query Frame = 0
Query:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRWVMLFFAGILVVSSANLMMEKEEDHGDSSQLENNTVLKIAKWMCDSTDYYDGEKFFTMVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLGISQDTFIVYASNV 148
            +LFDYFKVPA FQSRVLNWGIIGA++MR +MIV+GVAAIQRFR VML FAG+L+V++  L+ E      +   L +N ++ +++ M ++ DYYD EKFFTM +G ++ATPLLLCL+CIE++DFVFAVDSIPAVLG+S+D FIVY SN+
Sbjct:   84 LLFDYFKVPAAFQSRVLNWGIIGAIAMRGVMIVLGVAAIQRFRVVMLLFAGLLLVAAGRLVKESFAVEEEEEDLSSNWIMNVSRKMVNAVDYYDDEKFFTMSNGIQRATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDPFIVYTSNI 231          
BLAST of mRNA_H-paniculata_contig3729.9828.1 vs. uniprot
Match: A0A7S3XZU5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU5_HETAK)

HSP 1 Score: 190 bits (482), Expect = 1.800e-56
Identity = 95/148 (64.19%), Postives = 119/148 (80.41%), Query Frame = 0
Query:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRWVMLFFAGILVVSSANLMMEKEEDHGDSSQLENNTVLKIAKWMCDSTDYYDGEKFFTMVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLGISQDTFIVYASNV 148
            MLFDYFKVP +FQSRVL WGIIGA+SMR +MIV+GVAAIQ+FR V L FAGIL+ S   ++ E EE+      LE+N ++K++  M  ST  YDGEKFFT +DG K ATPLL+CLICIE++DFVFAVDSIPAV+G+++D FIVY+SN+
Sbjct:  150 MLFDYFKVPMQFQSRVLTWGIIGAMSMRLVMIVLGVAAIQKFRSVTLLFAGILIFSGYKMINESEEEE----DLEDNVIMKLSNKMVKSTTQYDGEKFFTKIDGVKYATPLLMCLICIELSDFVFAVDSIPAVIGVTKDPFIVYSSNL 293          
BLAST of mRNA_H-paniculata_contig3729.9828.1 vs. uniprot
Match: F0Y6P3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P3_AURAN)

HSP 1 Score: 186 bits (473), Expect = 6.100e-56
Identity = 89/148 (60.14%), Postives = 120/148 (81.08%), Query Frame = 0
Query:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRWVMLFFAGILVVSSANLMMEKEEDHGDSSQLENNTVLKIAKWMCDSTDYYDGEKFFTMVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLGISQDTFIVYASNV 148
            MLF+YF+VP  FQ RVL+WGI+GA+ MR +MIV GVAA++RFRW  L FAGIL++SS  L+ME +ED      + +N V+++++ +  +T  YDG++FFT+VDGAK+ATPLLLCL+C+E++D VFAVDSIPAVLGIS D F+VY+SNV
Sbjct:   63 MLFEYFRVPPAFQQRVLSWGIVGAILMRGVMIVAGVAAVKRFRWTSLLFAGILLLSSVKLLMEGDEDE----DVGDNLVMRLSRKLVGATTEYDGDRFFTVVDGAKRATPLLLCLVCVELSDVVFAVDSIPAVLGISTDPFVVYSSNV 206          
BLAST of mRNA_H-paniculata_contig3729.9828.1 vs. uniprot
Match: A0A7S2Y1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S8_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.180e-54
Identity = 92/148 (62.16%), Postives = 118/148 (79.73%), Query Frame = 0
Query:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRWVMLFFAGILVVSSANLMMEKEEDHGDSSQLENNTVLKIAKWMCDSTDYYDGEKFFTMVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLGISQDTFIVYASNV 148
            MLFDYFKVP  +Q+R L WGIIGA+SMR +MI++GVAAIQ+FR V+L FAGIL+ SS  L  E+E D      L +N +LKI+  M  S D+YDGEKFFT V+G + ATPLL+CL+CIE++DFVFAVDSIPAV+G+++D FIVY+SN+
Sbjct:  136 MLFDYFKVPLAYQNRCLTWGIIGAMSMRLVMILLGVAAIQKFRVVILLFAGILLASSWKLFFEEEGDE----DLSDNVILKISNKMFKSVDHYDGEKFFTKVNGVRHATPLLMCLVCIELSDFVFAVDSIPAVIGVTKDPFIVYSSNM 279          
BLAST of mRNA_H-paniculata_contig3729.9828.1 vs. uniprot
Match: A0A7S2RH37_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH37_9STRA)

HSP 1 Score: 181 bits (460), Expect = 5.990e-54
Identity = 88/148 (59.46%), Postives = 117/148 (79.05%), Query Frame = 0
Query:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRWVMLFFAGILVVSSANLMMEKEEDHGDSSQLENNTVLKIAKWMCDSTDYYDGEKFFTMVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLGISQDTFIVYASNV 148
            MLF+YF+VP  +Q RVL WGIIGAV MR IMIV GVAA+Q+FR V+L FA IL++S+  L  E +E       L NNTV++++K+   + + YDG+KFFT++DG ++ATPLLLCL+CIE++DFVFAVDSIPAV+G+SQD  IVY+SN+
Sbjct:   66 MLFNYFQVPLSYQGRVLTWGIIGAVVMRGIMIVAGVAAVQKFRMVILLFAAILMLSAVKLFFESDEPE----DLSNNTVMRLSKFAVGAVEEYDGDKFFTILDGQRRATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDLLIVYSSNI 209          
BLAST of mRNA_H-paniculata_contig3729.9828.1 vs. uniprot
Match: A0A7S2SRH4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRH4_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.600e-52
Identity = 90/148 (60.81%), Postives = 111/148 (75.00%), Query Frame = 0
Query:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRWVMLFFAGILVVSSANLMMEKEEDHGDSSQLENNTVLKIAKWMCDSTDYYDGEKFFTMVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLGISQDTFIVYASNV 148
            +LFDYFKVP   Q + L WGIIGAV MRAIMIV GVAAI+ FR V+L FAGIL+ S+  L  E E +      L  N V++IAK +C S DY+DG  FFTMV+G ++ATPLLLC++CIE++DFVFAVDSIPAVL IS+D  IV +SN+
Sbjct:   71 LLFDYFKVPLALQPKALQWGIIGAVVMRAIMIVFGVAAIKHFRPVILVFAGILMASAVKLFFENEAEE----DLSENAVMRIAKSLCPSVDYFDGSNFFTMVNGVRRATPLLLCVVCIELSDFVFAVDSIPAVLSISKDQLIVLSSNI 214          
BLAST of mRNA_H-paniculata_contig3729.9828.1 vs. uniprot
Match: W7THX1_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7THX1_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.750e-51
Identity = 89/148 (60.14%), Postives = 115/148 (77.70%), Query Frame = 0
Query:    1 MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRWVMLFFAGILVVSSANLMMEKEEDHGDSSQLENNTVLKIAKWMCDSTDYYDGEKFFTMVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLGISQDTFIVYASNV 148
            MLF+YFKVP E+QSR L+WGI+GAV+MR IMI VGVAAIQRFRWV+L FAG+L+ S+  L+ E   + G+   L NN ++  AK +  + D YDG+ FFT  +G + ATPL +CLICIE++DFVFAVDSIPAVLG+S+D  IVY+SN+
Sbjct:  158 MLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEED-LSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNI 304          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3729.9828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEA4_ECTSI1.690e-8088.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWN8_9PHAE1.470e-7888.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZA94_9STRA5.310e-6572.30Integral membrane protein TerC family-domain-conta... [more]
A0A7S1UHU3_9STRA1.320e-5862.84Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3XZU5_HETAK1.800e-5664.19Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
F0Y6P3_AURAN6.100e-5660.14Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2Y1S8_9STRA2.180e-5462.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RH37_9STRA5.990e-5459.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SRH4_9STRA3.600e-5260.81Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
W7THX1_9STRA1.750e-5160.14Integral membrane protein TerC n=3 Tax=Monodopsida... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005496Integral membrane protein TerCPFAMPF03741TerCcoord: 7..148
e-value: 5.6E-28
score: 97.8
IPR022369Integral membrane protein TerC, riboswitch-linkedPANTHERPTHR30238:SF0THYLAKOID MEMBRANE PROTEIN TERC, CHLOROPLASTICcoord: 1..148
NoneNo IPR availablePANTHERPTHR30238MEMBRANE BOUND PREDICTED REDOX MODULATORcoord: 1..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..37
NoneNo IPR availableTMHMMTMhelixcoord: 44..61
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3729contigH-paniculata_contig3729:15253..17239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3729.9828.1mRNA_H-paniculata_contig3729.9828.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3729 15253..17239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3729.9828.1 ID=prot_H-paniculata_contig3729.9828.1|Name=mRNA_H-paniculata_contig3729.9828.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp
MLFDYFKVPAEFQSRVLNWGIIGAVSMRAIMIVVGVAAIQRFRWVMLFFA
GILVVSSANLMMEKEEDHGDSSQLENNTVLKIAKWMCDSTDYYDGEKFFT
MVDGAKKATPLLLCLICIEMTDFVFAVDSIPAVLGISQDTFIVYASNV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005496Integral_membrane_TerC
IPR022369Integral_membrane_TerC_rswitch