prot_H-paniculata_contig37266.9820.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig37266.9820.1
Unique Nameprot_H-paniculata_contig37266.9820.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length181
Homology
BLAST of mRNA_H-paniculata_contig37266.9820.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 3.360e-40
Identity = 75/178 (42.13%), Postives = 120/178 (67.42%), Query Frame = 0
Query:    3 DCTNAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLADIIFLMDTGERRKISSNTGIHQGDGLGAALFCMPVGPILRKCREQFEGLGVELLAYLDHLVLAMGELTEENFRAIHFLVQKLARIGVQINNAKTKAVPPMNHIPTEREIAALAAIGISVAEGRGAVVVGTPIGTDAFVQQ 180
            DC+NAFN+ KR AI+ + A   P L  ++A+CY E  A  ++ MD+GERR +   +G+ QGDG+G  LF + + PI+ K +++++ LGV   AY+D + L + +LTEE+ +A+  LV +LA +G+ +N AK+ A+PP  H+ T+++   L  +G++VA G G  VVG PIGTD +V++
Sbjct:  681 DCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVA-GEGITVVGVPIGTDNYVRE 857          
BLAST of mRNA_H-paniculata_contig37266.9820.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 3.550e-39
Identity = 78/177 (44.07%), Postives = 109/177 (61.58%), Query Frame = 0
Query:    3 DCTNAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLADIIFLMDTGERRKISSNTGIHQGDGLGAALFCMPVGPILRKCREQFEGLGVELLAYLDHLVLAMGELTEENFRAIHFLVQKLARIGVQINNAKTKAVPPMNHIPTEREIAALAAIGISVAEGRGAVVVGTPIGTDAFVQ 179
            DC+NAFN+ KR AI+ + A   P L  ++A+CY E  A  I+ MD+GERR I   +G+ QGDG+G  LFC  + PI+ K R +++ LGV L AY+D + L    +T EN + I  LV +L  +G+ +N  K+ A+PP  H  T  E   L   G+ +AE  G  VVG PIGTDA+V+
Sbjct:  150 DCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVE 325          
BLAST of mRNA_H-paniculata_contig37266.9820.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 4.440e-39
Identity = 78/178 (43.82%), Postives = 110/178 (61.80%), Query Frame = 0
Query:    3 DCTNAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLADIIFLMDTGERRKISSNTGIHQGDGLGAALFCMPVGPILRKCREQFEGLGVELLAYLDHLV-LAMGELTEENFRAIHFLVQKLARIGVQINNAKTKAVPPMNHIPTEREIAALAAIGISVAEGRGAVVVGTPIGTDAFVQ 179
            DC+NAFN+ KR AI+ + A   P L  ++A+CY E  A  I+ MD+GERR I   +G+ QGDG+G  LFC  + PI+ K R +++ LGV L AY+D ++ L    +T EN + I  LV +L  +G+ +N  K+ A+PP  H  T  E   L   G+ +AE  G  VVG PIGTDA+V+
Sbjct:  142 DCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVE 318          
BLAST of mRNA_H-paniculata_contig37266.9820.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 5.610e-39
Identity = 77/177 (43.50%), Postives = 107/177 (60.45%), Query Frame = 0
Query:    3 DCTNAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLADIIFLMDTGERRKISSNTGIHQGDGLGAALFCMPVGPILRKCREQFEGLGVELLAYLDHLVLAMGELTEENFRAIHFLVQKLARIGVQINNAKTKAVPPMNHIPTEREIAALAAIGISVAEGRGAVVVGTPIGTDAFVQ 179
            DC+NAFN+ KR AI+ + A   P L  ++A+CY E  A  I+ MD+G RR I    G+ QGDG+G  LFC  + PI+ K R +++ LGV L AY+D + L    +T EN + I  LV +L  +G+ +N  K+ A+PP  H  T  E   L   G+ +AE  G  VVG PIGTDA+V+
Sbjct:  233 DCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVE 408          
BLAST of mRNA_H-paniculata_contig37266.9820.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 6.380e-39
Identity = 77/177 (43.50%), Postives = 108/177 (61.02%), Query Frame = 0
Query:    3 DCTNAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLADIIFLMDTGERRKISSNTGIHQGDGLGAALFCMPVGPILRKCREQFEGLGVELLAYLDHLVLAMGELTEENFRAIHFLVQKLARIGVQINNAKTKAVPPMNHIPTEREIAALAAIGISVAEGRGAVVVGTPIGTDAFVQ 179
            DC+NAFN+ KR AI+ + A   P L  ++A+CY E  A  I+ MD+GERR I   +G+ QGDG+G  LF   + PI+ K R +++ LGV L AY+D + L    +T EN + I  LV +L  +G+ +N  K+ A+PP  H  T  E   L   G+ +AE  G  VVG PIGTDA+V+
Sbjct:   99 DCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVE 274          
BLAST of mRNA_H-paniculata_contig37266.9820.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.310e-38
Identity = 78/177 (44.07%), Postives = 109/177 (61.58%), Query Frame = 0
Query:    3 DCTNAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLADIIFLMDTGERRKISSNTGIHQGDGLGAALFCMPVGPILRKCREQFEGLGVELLAYLDHLVLAMGELTEENFRAIHFLVQKLARIGVQINNAKTKAVPPMNHIPTEREIAALAAIGISVAEGRGAVVVGTPIGTDAFVQ 179
            DC+NAFN+ KR AI+ + A   P L  ++A+CY E  A  I+ MD+GERR I   +G+ QGDG+G  LFC  + PI+ K R +++ LGV L AY+D + L    +T EN + I  LV +L  +G+ +N  K+ A+PP  H  T  E   L   G+ +AE  G  VVG PIGTDA+V+
Sbjct:  511 DCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVE 686          
BLAST of mRNA_H-paniculata_contig37266.9820.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 2.000e-38
Identity = 77/177 (43.50%), Postives = 109/177 (61.58%), Query Frame = 0
Query:    3 DCTNAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLADIIFLMDTGERRKISSNTGIHQGDGLGAALFCMPVGPILRKCREQFEGLGVELLAYLDHLVLAMGELTEENFRAIHFLVQKLARIGVQINNAKTKAVPPMNHIPTEREIAALAAIGISVAEGRGAVVVGTPIGTDAFVQ 179
            DC+NAFN+ KR AI+ + A   P L  ++A+CY E  A  I+ MD+GERR I   +G+ QGDG+G  LFC  + PI+ K R +++ LGV L AY+D + L    +T EN + I  +V +L  +G+ +N  K+ A+PP  H  T  E   L   G+ +AE  G  VVG PIGTDA+V+
Sbjct:   58 DCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIGTDAYVE 233          
BLAST of mRNA_H-paniculata_contig37266.9820.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 6.630e-38
Identity = 76/177 (42.94%), Postives = 109/177 (61.58%), Query Frame = 0
Query:    3 DCTNAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLADIIFLMDTGERRKISSNTGIHQGDGLGAALFCMPVGPILRKCREQFEGLGVELLAYLDHLVLAMGELTEENFRAIHFLVQKLARIGVQINNAKTKAVPPMNHIPTEREIAALAAIGISVAEGRGAVVVGTPIGTDAFVQ 179
            DC+NAFN+ KR AI+ + +   P L  ++A+CY E  A  I+ MD+GERR I   +G+ QGDG+G  LFC  + PI+ K R +++ LGV L AY+D + L   ++T EN +    LV +L  +G+ +N  K+ A+PP  H  T  E   L   G+ +AE  G  VVG PIGTDA+V+
Sbjct:  510 DCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAE-EGITVVGVPIGTDAYVE 685          
BLAST of mRNA_H-paniculata_contig37266.9820.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 6.140e-37
Identity = 76/177 (42.94%), Postives = 107/177 (60.45%), Query Frame = 0
Query:    3 DCTNAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLADIIFLMDTGERRKISSNTGIHQGDGLGAALFCMPVGPILRKCREQFEGLGVELLAYLDHLVLAMGELTEENFRAIHFLVQKLARIGVQINNAKTKAVPPMNHIPTEREIAALAAIGISVAEGRGAVVVGTPIGTDAFVQ 179
            DC+NAFN+ KR AI+ + A   P L  ++A+CY E  A  I+ MD+GERR I   +G+ QGDG+G  LFC  + PI+ K R +++ LGV L AY+D + L    +T E  + I  LV +L  +G+ +N  K+ A+PP  H  T  E   L   G+ +AE  G  VVG PI TDA+V+
Sbjct:  537 DCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAE-EGITVVGVPIETDAYVE 712          
BLAST of mRNA_H-paniculata_contig37266.9820.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 8.190e-36
Identity = 78/179 (43.58%), Postives = 111/179 (62.01%), Query Frame = 0
Query:    3 DCTNAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLADIIFLMDTGERRKISSNTGIHQGDGLGAALFCMPVGPILRKCREQFEGLGVELLAYLDHLVLAMGELTEENFRAIHFLVQKLARIGVQINNAKTKAV-PPMNHI-PTEREIAALAAIGISVAEGRGAVVVGTPIGTDAFVQ 179
            DC+NAFN+ KR AI+ + A   P L  ++A+CY E  A  I+ MD+GERR I   +G+ QGDG+G  LFC  + PI+ K R +++ LGV L AY+D + L    +T EN + I  LV +L  +G+ +N  K+ A+ PP   + P ER +  L   G+ +AE  G  VVG PIGTDA+V+
Sbjct:  532 DCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRL--LGDAGLPIAE-EGITVVGVPIGTDAYVE 707          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37266.9820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH58_9PHAE3.360e-4042.13Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLG6_9PHAE3.550e-3944.07Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE4.440e-3943.82Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KR59_9PHAE5.610e-3943.50Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDD0_9PHAE6.380e-3943.50Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE1.310e-3844.07Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYJ9_9PHAE2.000e-3843.50Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE6.630e-3842.94Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE6.140e-3742.94Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JI32_9PHAE8.190e-3643.58Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 2..137
e-value: 4.6E-12
score: 45.9
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..159
score: 13.959

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37266contigH-paniculata_contig37266:1539..2081 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37266.9820.1mRNA_H-paniculata_contig37266.9820.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig37266 1539..2081 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig37266.9820.1 ID=prot_H-paniculata_contig37266.9820.1|Name=mRNA_H-paniculata_contig37266.9820.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp
ALDCTNAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLADIIFLMDTGE
RRKISSNTGIHQGDGLGAALFCMPVGPILRKCREQFEGLGVELLAYLDHL
VLAMGELTEENFRAIHFLVQKLARIGVQINNAKTKAVPPMNHIPTEREIA
ALAAIGISVAEGRGAVVVGTPIGTDAFVQQH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom