prot_H-paniculata_contig37241.9817.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig37241.9817.1
Unique Nameprot_H-paniculata_contig37241.9817.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length159
Homology
BLAST of mRNA_H-paniculata_contig37241.9817.1 vs. uniprot
Match: A0A7S2XW11_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW11_9STRA)

HSP 1 Score: 269 bits (687), Expect = 3.240e-84
Identity = 127/158 (80.38%), Postives = 142/158 (89.87%), Query Frame = 0
Query:    1 MFSQGVKSYRELPLRYADFGVLHRNELSGALTGLTRVRRFCQDDAHVFCREDQIKVEILAALHFMKYVYGIFGMGYKLELSTKPKKAMGDAELWEMAEESLREALDEFAGKGEWRVNAGDGAFYGPKIDIKVFDAMERVHQCATIQLDFQLPIRFNLK 158
            MF+  ++SYRELPLR ADFGVLHRNELSGALTGLTRVRRF QDDAH+FCREDQIK E+L AL FMK VYGIFGM YKLELST+P+KA+GD +LW+MAE  L EAL+EF+G+G WRVN GDGAFYGPKIDIKVFDAMERVHQCAT+QLDFQLPIRF L+
Sbjct:  480 MFAHKLRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKSEVLGALDFMKTVYGIFGMKYKLELSTRPEKALGDLDLWQMAEAQLEEALNEFSGEGNWRVNPGDGAFYGPKIDIKVFDAMERVHQCATVQLDFQLPIRFQLR 637          
BLAST of mRNA_H-paniculata_contig37241.9817.1 vs. uniprot
Match: A0A7S0L0E4_9STRA (Threonine--tRNA ligase n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0L0E4_9STRA)

HSP 1 Score: 258 bits (658), Expect = 7.000e-84
Identity = 118/158 (74.68%), Postives = 139/158 (87.97%), Query Frame = 0
Query:    1 MFSQGVKSYRELPLRYADFGVLHRNELSGALTGLTRVRRFCQDDAHVFCREDQIKVEILAALHFMKYVYGIFGMGYKLELSTKPKKAMGDAELWEMAEESLREALDEFAGKGEWRVNAGDGAFYGPKIDIKVFDAMERVHQCATIQLDFQLPIRFNLK 158
            MF   ++SYR+LP+RYADFGVLHRNELSGAL+GLTRVRRF QDDAH++CREDQI+ E++ AL FMK VY  FGM YKLELST+PKKA+GD  LW+ AEE+L  A+++FAGKG WRVN GDGAFYGPKIDIKV DA+ERVHQCAT+QLDFQLPIRF+L+
Sbjct:    7 MFGSAIRSYRDLPIRYADFGVLHRNELSGALSGLTRVRRFQQDDAHIYCREDQIESEVIGALEFMKSVYDTFGMTYKLELSTRPKKALGDIALWDRAEEALANAMNDFAGKGNWRVNPGDGAFYGPKIDIKVMDALERVHQCATVQLDFQLPIRFDLQ 164          
BLAST of mRNA_H-paniculata_contig37241.9817.1 vs. uniprot
Match: A0A7S3M8L6_9STRA (Threonine--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8L6_9STRA)

HSP 1 Score: 256 bits (654), Expect = 1.010e-82
Identity = 117/158 (74.05%), Postives = 138/158 (87.34%), Query Frame = 0
Query:    1 MFSQGVKSYRELPLRYADFGVLHRNELSGALTGLTRVRRFCQDDAHVFCREDQIKVEILAALHFMKYVYGIFGMGYKLELSTKPKKAMGDAELWEMAEESLREALDEFAGKGEWRVNAGDGAFYGPKIDIKVFDAMERVHQCATIQLDFQLPIRFNLK 158
            MF+  ++SYRELP+R ADFGVLHRNELSGALTGLTRVRRF QDD H+FCR+DQIK E+L AL FM++VY + GM YKLELST+P KA+G+  LW++AE  L EALDEFAG+G W+VN GDGAFYGPKIDIKV+DAMER+HQCAT+QLDFQLPIRF L+
Sbjct:   47 MFAHRLRSYRELPIRMADFGVLHRNELSGALTGLTRVRRFQQDDGHIFCRQDQIKAEVLGALDFMRFVYTVLGMTYKLELSTRPAKALGETALWDVAEAQLAEALDEFAGEGNWKVNPGDGAFYGPKIDIKVYDAMERIHQCATVQLDFQLPIRFGLE 204          
BLAST of mRNA_H-paniculata_contig37241.9817.1 vs. uniprot
Match: A0A1E7EVW2_9STRA (Threonine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVW2_9STRA)

HSP 1 Score: 254 bits (648), Expect = 8.390e-82
Identity = 118/158 (74.68%), Postives = 137/158 (86.71%), Query Frame = 0
Query:    1 MFSQGVKSYRELPLRYADFGVLHRNELSGALTGLTRVRRFCQDDAHVFCREDQIKVEILAALHFMKYVYGIFGMGYKLELSTKPKKAMGDAELWEMAEESLREALDEFAGKGEWRVNAGDGAFYGPKIDIKVFDAMERVHQCATIQLDFQLPIRFNLK 158
            MF    +SYRELP+R ADFGVLHRNE SGALTGLTRVRRF QDDAH+FCREDQI+ E++A L FMK+VY IFGM Y+LELST+PKKA+G  ELW+ AE +L +A+D+FAG+G WR N GDGAFYGPKIDIKV DAM+RVHQCATIQLDFQLPIRF+L+
Sbjct:   12 MFGSMTRSYRELPMRIADFGVLHRNEQSGALTGLTRVRRFQQDDAHIFCREDQIEKEVVACLEFMKFVYDIFGMSYRLELSTRPKKALGKKELWDQAETALAQAMDKFAGEGNWRENPGDGAFYGPKIDIKVMDAMDRVHQCATIQLDFQLPIRFDLR 169          
BLAST of mRNA_H-paniculata_contig37241.9817.1 vs. uniprot
Match: A0A7S4EAD1_9STRA (Threonine--tRNA ligase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAD1_9STRA)

HSP 1 Score: 264 bits (674), Expect = 2.720e-81
Identity = 123/158 (77.85%), Postives = 139/158 (87.97%), Query Frame = 0
Query:    1 MFSQGVKSYRELPLRYADFGVLHRNELSGALTGLTRVRRFCQDDAHVFCREDQIKVEILAALHFMKYVYGIFGMGYKLELSTKPKKAMGDAELWEMAEESLREALDEFAGKGEWRVNAGDGAFYGPKIDIKVFDAMERVHQCATIQLDFQLPIRFNLK 158
            MF   V+S+R+LP+RYADFGVLHRNELSGALTGLTRVRRF QDD H+FCR+DQI+ E+  AL FMKYVYGIFGMGYKLELST+PKKA+GD  LW  AE +L  A+D+FAGKG WRVN GDGAFYGPKIDIKV DA++RVHQCATIQLDFQLPIRF+LK
Sbjct:  450 MFKHDVRSWRDLPMRYADFGVLHRNELSGALTGLTRVRRFQQDDGHIFCRDDQIEEEVKGALEFMKYVYGIFGMGYKLELSTRPKKALGDISLWNRAEAALASAMDDFAGKGGWRVNPGDGAFYGPKIDIKVTDALDRVHQCATIQLDFQLPIRFDLK 607          
BLAST of mRNA_H-paniculata_contig37241.9817.1 vs. uniprot
Match: A0A7R9X172_9STRA (Threonine--tRNA ligase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9X172_9STRA)

HSP 1 Score: 250 bits (639), Expect = 4.550e-81
Identity = 117/157 (74.52%), Postives = 134/157 (85.35%), Query Frame = 0
Query:    1 MFSQGVKSYRELPLRYADFGVLHRNELSGALTGLTRVRRFCQDDAHVFCREDQIKVEILAALHFMKYVYGIFGMGYKLELSTKPKKAMGDAELWEMAEESLREALDEFAGKGEWRVNAGDGAFYGPKIDIKVFDAMERVHQCATIQLDFQLPIRFNL 157
            MF   ++SYR+LP+R+ADFGVLHRNELSGAL+GLTRVRRF QDDAH++CREDQI  E+L AL FMKYVY IFGM YKLELST+P KA+G+ ELW+ AE +L EA++ F G+G WR N GDGAFYGPKIDIKV DAMERVHQCATIQLDFQLP RF L
Sbjct:    2 MFGNSLRSYRDLPIRFADFGVLHRNELSGALSGLTRVRRFQQDDAHIYCREDQIADEVLGALEFMKYVYDIFGMTYKLELSTRPAKALGEMELWDRAESALAEAMNRFIGEGNWRENPGDGAFYGPKIDIKVMDAMERVHQCATIQLDFQLPRRFGL 158          
BLAST of mRNA_H-paniculata_contig37241.9817.1 vs. uniprot
Match: A0A1Z5JG85_FISSO (Threonine--tRNA ligase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JG85_FISSO)

HSP 1 Score: 251 bits (642), Expect = 5.490e-81
Identity = 116/158 (73.42%), Postives = 137/158 (86.71%), Query Frame = 0
Query:    1 MFSQGVKSYRELPLRYADFGVLHRNELSGALTGLTRVRRFCQDDAHVFCREDQIKVEILAALHFMKYVYGIFGMGYKLELSTKPKKAMGDAELWEMAEESLREALDEFAGKGEWRVNAGDGAFYGPKIDIKVFDAMERVHQCATIQLDFQLPIRFNLK 158
            +F   ++SYR+LP+R ADFGVLHRNELSGALTGLTRVRRF QDDAH++CREDQI+ E++ AL+FMK VY  FGM YKLELST+P KA+GD ELW+ AE +L  A++EF G+G WR+N GDGAFYGPKIDIKV DAM+RVHQCATIQLDFQLPIRFNL+
Sbjct:   30 IFGGAIRSYRDLPIRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIYCREDQIESEVVGALNFMKDVYDTFGMSYKLELSTRPAKALGDIELWDRAEAALARAMNEFIGEGNWRINPGDGAFYGPKIDIKVMDAMDRVHQCATIQLDFQLPIRFNLQ 187          
BLAST of mRNA_H-paniculata_contig37241.9817.1 vs. uniprot
Match: A0A835YMV8_9STRA (Threonine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV8_9STRA)

HSP 1 Score: 263 bits (672), Expect = 6.250e-81
Identity = 125/157 (79.62%), Postives = 136/157 (86.62%), Query Frame = 0
Query:    1 MFSQGVKSYRELPLRYADFGVLHRNELSGALTGLTRVRRFCQDDAHVFCREDQIKVEILAALHFMKYVYGIFGMGYKLELSTKPKKAMGDAELWEMAEESLREALDEFAGKGEWRVNAGDGAFYGPKIDIKVFDAMERVHQCATIQLDFQLPIRFNL 157
            MF+  ++SYRELP+R ADFGVLHRNE+SGALTGLTRVRRFCQDDAH+FCREDQI  E+L +L FMK VY IFGM YKLELSTKP KA+GD  LW  AE SL  ALDEFAGKG WR N GDGAFYGPKIDIKVFDAMERVHQCAT+QLDFQLPIRF+L
Sbjct:  465 MFAHRLRSYRELPIRMADFGVLHRNEISGALTGLTRVRRFCQDDAHIFCREDQITAEVLGSLDFMKTVYDIFGMTYKLELSTKPAKALGDDSLWAAAEASLAAALDEFAGKGNWRENPGDGAFYGPKIDIKVFDAMERVHQCATVQLDFQLPIRFDL 621          
BLAST of mRNA_H-paniculata_contig37241.9817.1 vs. uniprot
Match: A0A7S4JFI0_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JFI0_9STRA)

HSP 1 Score: 255 bits (651), Expect = 8.350e-81
Identity = 116/158 (73.42%), Postives = 136/158 (86.08%), Query Frame = 0
Query:    1 MFSQGVKSYRELPLRYADFGVLHRNELSGALTGLTRVRRFCQDDAHVFCREDQIKVEILAALHFMKYVYGIFGMGYKLELSTKPKKAMGDAELWEMAEESLREALDEFAGKGEWRVNAGDGAFYGPKIDIKVFDAMERVHQCATIQLDFQLPIRFNLK 158
            MF   ++SYR+LP+RY DFGVLHRNELSGALTGLTRVRRF QDD HVFCREDQI+ E++ AL FM+ VY  FGM YKLELST+P KA+G+  LW+ AE++L  A+D FAGKGEW++N GDGAFYGPKIDIKV DAM+R+HQCATIQLDFQLPIRFNL+
Sbjct:  269 MFGSDIRSYRDLPIRYGDFGVLHRNELSGALTGLTRVRRFQQDDGHVFCREDQIEAEVIGALDFMQSVYTTFGMSYKLELSTRPSKALGEKALWDRAEDALARAMDTFAGKGEWKINPGDGAFYGPKIDIKVMDAMDRIHQCATIQLDFQLPIRFNLQ 426          
BLAST of mRNA_H-paniculata_contig37241.9817.1 vs. uniprot
Match: H6WB86_VAULI (Threonine--tRNA ligase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB86_VAULI)

HSP 1 Score: 262 bits (670), Expect = 1.210e-80
Identity = 125/157 (79.62%), Postives = 137/157 (87.26%), Query Frame = 0
Query:    1 MFSQGVKSYRELPLRYADFGVLHRNELSGALTGLTRVRRFCQDDAHVFCREDQIKVEILAALHFMKYVYGIFGMGYKLELSTKPKKAMGDAELWEMAEESLREALDEFAGKGEWRVNAGDGAFYGPKIDIKVFDAMERVHQCATIQLDFQLPIRFNL 157
            M++  ++SYRELPLR ADFGVLHRNE+SGAL+GLTRVRRFCQDDAH+FCREDQI  E+  AL FMK VY IFGM YKLELSTKP+KA+GD  LWE AE++L EALD FAG G WRVN GDGAFYGPKIDIKVFDAMER HQCATIQLDFQLPIRFNL
Sbjct:  467 MYAHRLRSYRELPLRLADFGVLHRNEISGALSGLTRVRRFCQDDAHIFCREDQITEEVKGALEFMKAVYDIFGMTYKLELSTKPEKALGDDSLWETAEKALAEALDGFAGSGNWRVNPGDGAFYGPKIDIKVFDAMERSHQCATIQLDFQLPIRFNL 623          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37241.9817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2XW11_9STRA3.240e-8480.38Threonine--tRNA ligase (Fragment) n=1 Tax=Fibrocap... [more]
A0A7S0L0E4_9STRA7.000e-8474.68Threonine--tRNA ligase n=1 Tax=Asterionellopsis gl... [more]
A0A7S3M8L6_9STRA1.010e-8274.05Threonine--tRNA ligase n=1 Tax=Spumella elongata T... [more]
A0A1E7EVW2_9STRA8.390e-8274.68Threonine--tRNA ligase n=1 Tax=Fragilariopsis cyli... [more]
A0A7S4EAD1_9STRA2.720e-8177.85Threonine--tRNA ligase n=1 Tax=Pelagomonas calceol... [more]
A0A7R9X172_9STRA4.550e-8174.52Threonine--tRNA ligase n=1 Tax=Craspedostauros aus... [more]
A0A1Z5JG85_FISSO5.490e-8173.42Threonine--tRNA ligase n=1 Tax=Fistulifera solaris... [more]
A0A835YMV8_9STRA6.250e-8179.62Threonine--tRNA ligase n=1 Tax=Tribonema minus Tax... [more]
A0A7S4JFI0_9STRA8.350e-8173.42Threonine--tRNA ligase (Fragment) n=1 Tax=Odontell... [more]
H6WB86_VAULI1.210e-8079.62Threonine--tRNA ligase n=1 Tax=Vaucheria litorea T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002320Threonine-tRNA ligase, class IIaPRINTSPR01047TRNASYNTHTHRcoord: 126..154
score: 56.16
coord: 23..46
score: 69.05
IPR002320Threonine-tRNA ligase, class IIaPANTHERPTHR11451TRNA SYNTHETASE-RELATEDcoord: 1..158
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 4..157
e-value: 9.7E-21
score: 74.5
NoneNo IPR availableGENE3D3.30.930.10coord: 1..158
e-value: 8.0E-66
score: 224.3
NoneNo IPR availablePANTHERPTHR11451:SF46FI05224Pcoord: 1..158
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 1..157
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 10..144
score: 8.67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37241contigH-paniculata_contig37241:459..1702 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37241.9817.1mRNA_H-paniculata_contig37241.9817.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig37241 459..1702 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig37241.9817.1 ID=prot_H-paniculata_contig37241.9817.1|Name=mRNA_H-paniculata_contig37241.9817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp
MFSQGVKSYRELPLRYADFGVLHRNELSGALTGLTRVRRFCQDDAHVFCR
EDQIKVEILAALHFMKYVYGIFGMGYKLELSTKPKKAMGDAELWEMAEES
LREALDEFAGKGEWRVNAGDGAFYGPKIDIKVFDAMERVHQCATIQLDFQ
LPIRFNLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002320Thr-tRNA-ligase_IIa
IPR002314aa-tRNA-synt_IIb
IPR006195aa-tRNA-synth_II