prot_H-paniculata_contig37156.9798.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig37156.9798.1
Unique Nameprot_H-paniculata_contig37156.9798.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length203
Homology
BLAST of mRNA_H-paniculata_contig37156.9798.1 vs. uniprot
Match: D7G787_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G787_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 6.060e-14
Identity = 33/43 (76.74%), Postives = 40/43 (93.02%), Query Frame = 0
Query:  155 DEDWLIFNDFLVERTVLEDARGFGPEWKEPCVIVYRRLFVVEE 197
            +E+WL+FNDFLVE+TVL+DARGFGPEWKEPCV+VYRR+   EE
Sbjct:  755 EEEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEE 797          
BLAST of mRNA_H-paniculata_contig37156.9798.1 vs. uniprot
Match: A0A6H5KX54_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX54_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.330e-13
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query:  158 WLIFNDFLVERTVLEDARGFGPEWKEPCVIVYRRLFVVEE 197
            WL+FNDFLVE+TVL+DARGFGPEWKEPCV+VYRR+   EE
Sbjct: 1321 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEE 1360          
BLAST of mRNA_H-paniculata_contig37156.9798.1 vs. uniprot
Match: A0A836CIT6_9STRA (Exonuclease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT6_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.370e-7
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0
Query:  155 DEDWLIFNDFLVERTVLEDARGFGPEWKEPCVIVYR 190
            D  WLIFND L +RT L+D RGFGP WK PC+++YR
Sbjct:   81 DGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYR 116          
BLAST of mRNA_H-paniculata_contig37156.9798.1 vs. uniprot
Match: K8ZCB7_NANGC (PAB-dependent poly(A)-specific ribonuclease subunit 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZCB7_NANGC)

HSP 1 Score: 58.5 bits (140), Expect = 1.070e-6
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0
Query:  158 WLIFNDFLVERTVLEDARGFGPEWKEPCVIVYR 190
            W I NDFLVE T+LEDA GF P WKEPC+++YR
Sbjct:   21 WYIVNDFLVEPTILEDALGFLPAWKEPCILLYR 53          
BLAST of mRNA_H-paniculata_contig37156.9798.1 vs. uniprot
Match: A0A4D9D4P1_9STRA (Exonuclease domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4P1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.090e-6
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0
Query:  158 WLIFNDFLVERTVLEDARGFGPEWKEPCVIVYR 190
            W I NDFLVE T+LEDA GF P WKEPC+++YR
Sbjct:  619 WYIVNDFLVEATILEDALGFLPTWKEPCILLYR 651          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37156.9798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G787_ECTSI6.060e-1476.74Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KX54_9PHAE7.330e-1380.00Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
A0A836CIT6_9STRA1.370e-763.89Exonuclease-domain-containing protein n=1 Tax=Trib... [more]
K8ZCB7_NANGC1.070e-669.70PAB-dependent poly(A)-specific ribonuclease subuni... [more]
A0A4D9D4P1_9STRA1.090e-669.70Exonuclease domain-containing protein n=1 Tax=Nann... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37156contigH-paniculata_contig37156:528..1548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37156.9798.1mRNA_H-paniculata_contig37156.9798.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig37156 528..1548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig37156.9798.1 ID=prot_H-paniculata_contig37156.9798.1|Name=mRNA_H-paniculata_contig37156.9798.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
GGGRGGGGGVAAGSGGGASSVAAGAAGVTAEVAEELDEGHLVVHVRAQPA
IVQQQQPDATSTAASVPVTPKKRDKTPLQTSSFSSDANNITTSATGTAKS
KGEEEAVNASKDGGKDTAAAAAAAAAAPSDVRDLQEATPNNLTSRQQQQQ
QGEEDEDWLIFNDFLVERTVLEDARGFGPEWKEPCVIVYRRLFVVEEAED
VEA
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