prot_H-paniculata_contig3715.9797.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3715.9797.1
Unique Nameprot_H-paniculata_contig3715.9797.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length464
Homology
BLAST of mRNA_H-paniculata_contig3715.9797.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.670e-23
Identity = 69/158 (43.67%), Postives = 89/158 (56.33%), Query Frame = 0
Query:  134 GVLAEMAPLCEETTARQRRQSASAAKAAHR--ALRNKVPYQDAGRRQGNRRIEQAEVEAV--MTEMDSPIQEVVSKTEVDAGVPLHEQKINPFGADG--YTCASCSGILFNAYMHCFGCESLSGRDLNLCLECHAAGRLAFPMMPAEMRGLADQMHCP 285
            GVL  +AP+ EE T RQ R     AKAA +  A     P +   R+ G    +  + + V  M +M  P+++ V K EVD  +P   +KINPF +DG  + CASC   +FNAY+HC+GCE+L  RDL LCL CHAAGR  F        G  DQ HCP
Sbjct: 1138 GVLMALAPMLEELTDRQLRDYELQAKAAEKREAAVTLDPSRPGKRKLGPAAAKARDAQTVQLMAKMVKPLKDAVGKVEVDTSIPTFLEKINPFSSDGESFNCASCKAEIFNAYLHCYGCETLLSRDLTLCLACHAAGRFGFSTGAGG--GCTDQDHCP 1293          
BLAST of mRNA_H-paniculata_contig3715.9797.1 vs. uniprot
Match: A0A6H5K2H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H3_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 3.000e-11
Identity = 67/221 (30.32%), Postives = 90/221 (40.72%), Query Frame = 0
Query:  134 GVLAEMAPLCEETTARQRRQSASAAKAAHR--ALRNKVPYQDAGRRQGNR--RIEQAEVEAVMTEMDSPIQEVVSKTEVDAGVPLHEQKINPFGADGYTCASCSGILFNAYMHCFGCESLSGRDLNLCLECHAAGRLAFPMMPAEMRGLADQMHCPCDPIACQAQQEQRACKIVRDEGQDKGKFVPRCGCDEALCRQCQLCVLCACCCHQRFQLRFRFEAP 350
            GVL  +AP+ EE T RQ R     AKAA +  A     P +   R+ G    +   A+   +M +M  P+++   + EVD  +P   +KINPF +DG +               F C S + R L                                       +Q +R  +  R  G         C C E  CRQC LCV CAC CH+RFQLR+RFE P
Sbjct:  324 GVLMALAPMLEELTDRQLRDYGLQAKAAEKREAAVTLNPSRPGKRKLGPAAAKARDAQTMQLMAKMVKPLKDAAGRVEVDTSIPTFLEKINPFSSDGES---------------FNCASCNERTL---------------------------------------EQRERMSRSQRSHGVFPASM---CDCKEPSCRQCHLCVACACDCHERFQLRYRFEHP 487          
BLAST of mRNA_H-paniculata_contig3715.9797.1 vs. uniprot
Match: F0W0K4_9STRA (Uncharacterized protein AlNc14C4G646 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0K4_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.370e-6
Identity = 44/154 (28.57%), Postives = 67/154 (43.51%), Query Frame = 0
Query:  224 ADGYTCASCSGILFNAYMHCFGCESLSGRD---------LNLCLECHAAGRLAFPMMPAEMRGLADQMHCPCDPIACQAQQEQRACKIVRDEGQDKGKFVPRCGCDEAL-CRQCQLCVLCACCCHQRFQLRFRFEAPESMDKFVRVMRDVVGGP 367
            A  +TC  C+  L N Y  C GC + S +D           LC +CH    L +P      R    Q+     P    A     + ++             RC C   + C  C LCVLC C CH RFQ+R+RF  P+++++ ++ ++ +V  P
Sbjct:  253 ASNFTCNLCNRELVNGYQLCLGCLACSQKDNSSQIQSKLTRLCYQCH----LKYPK--EHQRKRLKQLRSLQLPFVSSASLLNPSIRLHSPL---------RCDCKTTMRCSFCTLCVLCDCQCHTRFQIRYRFATPDTLNRLMKDVKCIVEFP 391          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3715.9797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCL4_ECTSI1.670e-2343.67ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A6H5K2H3_9PHAE3.000e-1130.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0W0K4_9STRA2.370e-628.57Uncharacterized protein AlNc14C4G646 n=1 Tax=Albug... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3715contigH-paniculata_contig3715:7048..14312 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3715.9797.1mRNA_H-paniculata_contig3715.9797.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3715 7048..16315 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3715.9797.1 ID=prot_H-paniculata_contig3715.9797.1|Name=mRNA_H-paniculata_contig3715.9797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=464bp
MGKEWAMEFSGSVMQMAKLAQELAQGMAQGFTVPSGNSSNSMTTPNGHLP
NAQLPNGQFSKGKSLNGRFSSGQVPSGQFSNRQLPNGQVPNGPTPNGTNS
NGVLPKRKAQKRLSRKGRNEGCQRLSAVGCEASGVLAEMAPLCEETTARQ
RRQSASAAKAAHRALRNKVPYQDAGRRQGNRRIEQAEVEAVMTEMDSPIQ
EVVSKTEVDAGVPLHEQKINPFGADGYTCASCSGILFNAYMHCFGCESLS
GRDLNLCLECHAAGRLAFPMMPAEMRGLADQMHCPCDPIACQAQQEQRAC
KIVRDEGQDKGKFVPRCGCDEALCRQCQLCVLCACCCHQRFQLRFRFEAP
ESMDKFVRVMRDVVGGPSSIDLDVTSFKYPRAHATTTSGGISGGGGGGGR
GGSGGGGGSPSSSSRTSRGDSEADVVGAAGGASVTAGRRASRVMGKGKSK
ASSGRGGGGRGQRG
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