prot_H-paniculata_contig37126.9791.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig37126.9791.1
Unique Name	prot_H-paniculata_contig37126.9791.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	120

Homology

[Close]

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot
Match: D7G698_ECTSI (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G698_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 9.750e-63
Identity = 93/112 (83.04%), Postives = 106/112 (94.64%), Query Frame = 0

Query:    9 QEMDPAERPTNFVPKSFDSLRQARAYAGLVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYVGHASRVQCLACSGDGQWLASGDEDGMVIVWEV 120
            +EMDP+ERPTNF+PKSFDSLR+  AY G VKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEY GHA+ V+C+ACSGDGQW+A+GD++G++IVWEV
Sbjct:  249 EEMDPSERPTNFIPKSFDSLREVGAYGGFVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYKGHAASVRCIACSGDGQWMATGDDNGLLIVWEV 360

[Close]

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot
Match: A0A6H5JI55_9PHAE (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI55_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 3.550e-61
Identity = 93/112 (83.04%), Postives = 105/112 (93.75%), Query Frame = 0

Query:    9 QEMDPAERPTNFVPKSFDSLRQARAYAGLVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYVGHASRVQCLACSGDGQWLASGDEDGMVIVWEV 120
            +EMDP+ERPTNF+PKSFDSLR+  AY G VKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEY GHA+ V+C+ACSGDGQW+A+GD+ G++IVWEV
Sbjct:  410 EEMDPSERPTNFIPKSFDSLREVGAYGGFVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYKGHAASVRCIACSGDGQWMATGDDSGVLIVWEV 521

[Close]

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot
Match: A0A836CBU6_9STRA (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU6_9STRA)

HSP 1 Score: 176 bits (446), Expect = 2.710e-49
Identity = 86/116 (74.14%), Postives = 97/116 (83.62%), Query Frame = 0

Query:    9 QEMDPAERPTNFVPKSFDSLRQAR---AYAGLVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEY-VGHASRVQCLACSGDGQWLASGDEDGMVIVWEV 120
            +EMDP ERPTNF+PK FDSLRQA    AYAGL KERFERCLDLYLCPRAFKRRLNIDPESLVP+LP PR+L+PFPN LC+ Y V   +RV CLA S DGQ++ASGDE G+V +WEV
Sbjct:  253 REMDPEERPTNFIPKRFDSLRQASRVGAYAGLCKERFERCLDLYLCPRAFKRRLNIDPESLVPKLPHPRDLRPFPNELCLTYGVSGGARVLCLAVSDDGQYMASGDEAGVVSLWEV 368

[Close]

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot
Match: A0A7S2V407_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V407_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.440e-43
Identity = 73/112 (65.18%), Postives = 86/112 (76.79%), Query Frame = 0

Query:    9 QEMDPAERPTNFVPKSFDSLRQARAYAGLVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYVGHASRVQCLACSGDGQWLASGDEDGMVIVWEV 120
            ++MDP ERP +FVPK   SLR+  AY   VK+RFERCLDLYLCPRA K RLNIDPESLVP LP+P EL+PFPN L + + GH  RV+ ++ S DGQ+LASG EDG V VWEV
Sbjct:  359 EQMDPEERPYDFVPKRHSSLREVGAYKDFVKQRFERCLDLYLCPRALKHRLNIDPESLVPHLPKPSELRPFPNTLAITFKGHEQRVRAVSVSSDGQFLASGAEDGSVRVWEV 470

[Close]

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot
Match: A0A2D4BT54_PYTIN (BOP1NT domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BT54_PYTIN)

HSP 1 Score: 152 bits (383), Expect = 1.950e-41
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 0

Query:    9 QEMDPAERPTNFVPKSFDSLRQARAYAGLVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYVGHASRVQCLACSGDGQWLASGDEDGMVIVWEV 120
            +EMDP ER TNF+P+ F SLR+   Y+  V+ERFERCLDLYLCPR  KR+LNIDPESLVP LP+PR+L+PFPN L + + GH  RV+ L     GQ+LASG +D  V +WEV
Sbjct:  205 EEMDPEERETNFIPRKFKSLREVTGYSNFVRERFERCLDLYLCPRVNKRKLNIDPESLVPELPKPRDLRPFPNTLALVFTGHTGRVRSLTMDPYGQYLASGSDDQTVRIWEV 316

[Close]

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot
Match: U6DGN8_NEOVI (Ribosome biogenesis protein BOP1 (Fragment) n=2 Tax=Mustelinae TaxID=169418 RepID=U6DGN8_NEOVI)

HSP 1 Score: 148 bits (373), Expect = 4.840e-40
Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 0

Query:    9 QEMDPAERPTNFVPKSFDSLRQARAYAGLVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYVGHASRVQCLACSGDGQWLASGDEDGMVIVWEV 120
            ++ +P ER  NF+P+ F SLR   AY   ++ERFERCLDLYLCPR  K R+N+DPE L+P+LPRPR+L+PFP    + Y GH++ V+CL+ S DGQWLASG +DG V +WEV
Sbjct:  308 EQQEPGERKLNFLPRKFPSLRAVPAYGRFIQERFERCLDLYLCPRQRKMRVNVDPEDLIPKLPRPRDLQPFPTCQALVYRGHSNLVRCLSVSPDGQWLASGSDDGSVRLWEV 419

[Close]

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot
Match: A0A7S3HLF9_9STRA (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLF9_9STRA)

HSP 1 Score: 150 bits (380), Expect = 6.300e-40
Identity = 67/112 (59.82%), Postives = 83/112 (74.11%), Query Frame = 0

Query:    9 QEMDPAERPTNFVPKSFDSLRQARAYAGLVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYVGHASRVQCLACSGDGQWLASGDEDGMVIVWEV 120
            +++DP +R  NF PK    LR    Y   +KERFERCLDLYLCPR  KRRLNIDPE+LVPRLP PRELKPFPN LC++++GH   V+ +A S DGQ+LAS  +DG V +WE+
Sbjct:  370 EDLDPKDRTYNFTPKEHSCLRHVGGYDNFIKERFERCLDLYLCPRKLKRRLNIDPETLVPRLPSPRELKPFPNTLCLQFLGHVGAVRSVAISPDGQYLASAGDDGTVRLWEL 481

[Close]

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot
Match: A0A2D4BT84_PYTIN (Ribosome biogenesis protein BOP1 homolog n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BT84_PYTIN)

HSP 1 Score: 150 bits (378), Expect = 6.850e-40
Identity = 67/112 (59.82%), Postives = 83/112 (74.11%), Query Frame = 0

Query:    9 QEMDPAERPTNFVPKSFDSLRQARAYAGLVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYVGHASRVQCLACSGDGQWLASGDEDGMVIVWEV 120
            +EMDP ER TNF+P+ F SLR+   Y+  V+ERFERCLDLYLCPR  KR+LNIDPESLVP LP+PR+L+PFPN   + + GH  RV+ L     GQ+LASG +D  V +WEV
Sbjct:  226 EEMDPEERETNFIPRKFKSLREVTGYSNFVRERFERCLDLYLCPRVNKRKLNIDPESLVPELPKPRDLRPFPNTXALVFTGHTGRVRSLTMDPYGQYLASGSDDQTVRIWEV 337

[Close]

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot
Match: A0A8J6DX53_GALPY (Ribosome biogenesis protein BOP1 (Fragment) n=1 Tax=Galemys pyrenaicus TaxID=202257 RepID=A0A8J6DX53_GALPY)

HSP 1 Score: 144 bits (362), Expect = 1.630e-39
Identity = 64/112 (57.14%), Postives = 81/112 (72.32%), Query Frame = 0

Query:    9 QEMDPAERPTNFVPKSFDSLRQARAYAGLVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYVGHASRVQCLACSGDGQWLASGDEDGMVIVWEV 120
            ++ +PAER  NF+P+ F SLR   AY   V ERFERCLDLYLCPR  K R+N+DPE L+P+LPRPR+L+PFP    + Y GH   V+C++ S  GQWLASG +DG V +WEV
Sbjct:  143 EQQEPAERKRNFLPRRFASLRAVPAYGRFVHERFERCLDLYLCPRQRKMRVNVDPEDLIPKLPRPRDLQPFPTCQALVYRGHRDLVRCISVSPGGQWLASGSDDGCVRLWEV 254

[Close]

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot
Match: A0A8C7CFF2_NEOVI (Ribosome biogenesis protein BOP1 n=1 Tax=Neovison vison TaxID=452646 RepID=A0A8C7CFF2_NEOVI)

HSP 1 Score: 149 bits (375), Expect = 1.860e-39
Identity = 65/116 (56.03%), Postives = 84/116 (72.41%), Query Frame = 0

Query:    5 CHSTQEMDPAERPTNFVPKSFDSLRQARAYAGLVKERFERCLDLYLCPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYVGHASRVQCLACSGDGQWLASGDEDGMVIVWEV 120
            C    + +P ER  NF+P+ F SLR   AY   ++ERFERCLDLYLCPR  K R+N+DPE L+P+LPRPR+L+PFP    + Y GH++ V+CL+ S DGQWLASG +DG V +WEV
Sbjct:  271 CSRPWQQEPGERKLNFLPRKFPSLRAVPAYGRFIQERFERCLDLYLCPRQRKMRVNVDPEDLIPKLPRPRDLQPFPTCQALVYRGHSNLVRCLSVSPDGQWLASGSDDGSVRLWEV 386

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig37126.9791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G698_ECTSI	9.750e-63	83.04	Ribosome biogenesis protein BOP1 homolog n=1 Tax=E...	[more]
A0A6H5JI55_9PHAE	3.550e-61	83.04	Ribosome biogenesis protein BOP1 homolog n=1 Tax=E...	[more]
A0A836CBU6_9STRA	2.710e-49	74.14	Ribosome biogenesis protein BOP1 homolog n=1 Tax=T...	[more]
A0A7S2V407_9STRA	1.440e-43	65.18	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A2D4BT54_PYTIN	1.950e-41	60.71	BOP1NT domain-containing protein (Fragment) n=1 Ta...	[more]
U6DGN8_NEOVI	4.840e-40	57.14	Ribosome biogenesis protein BOP1 (Fragment) n=2 Ta...	[more]
A0A7S3HLF9_9STRA	6.300e-40	59.82	Ribosome biogenesis protein BOP1 homolog n=1 Tax=S...	[more]
A0A2D4BT84_PYTIN	6.850e-40	59.82	Ribosome biogenesis protein BOP1 homolog n=2 Tax=P...	[more]
A0A8J6DX53_GALPY	1.630e-39	57.14	Ribosome biogenesis protein BOP1 (Fragment) n=1 Ta...	[more]
A0A8C7CFF2_NEOVI	1.860e-39	56.03	Ribosome biogenesis protein BOP1 n=1 Tax=Neovison ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012953	BOP1, N-terminal domain	SMART	SM01035	BOP1NT_2	coord: 2..80 e-value: 0.0049 score: -117.5
IPR012953	BOP1, N-terminal domain	PFAM	PF08145	BOP1NT	coord: 7..80 e-value: 6.2E-31 score: 108.3
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 80..119 e-value: 6.4E-7 score: 39.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 86..118 e-value: 5.3E-8 score: 33.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 87..120 score: 13.683
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 70..120 e-value: 8.6E-16 score: 59.7
IPR028598	WD repeat BOP1/Erb1	PANTHER	PTHR17605	RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN	coord: 7..120
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 106..120
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 87..120 score: 12.657
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 44..119

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig37126	contig	H-paniculata_contig37126:676..1848 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig37126.9791.1	mRNA_H-paniculata_contig37126.9791.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig37126 676..1848 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig37126.9791.1 ID=prot_H-paniculata_contig37126.9791.1|Name=mRNA_H-paniculata_contig37126.9791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp
MVWRCHSTQEMDPAERPTNFVPKSFDSLRQARAYAGLVKERFERCLDLYL
CPRAFKRRLNIDPESLVPRLPRPRELKPFPNALCVEYVGHASRVQCLACS
GDGQWLASGDEDGMVIVWEV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012953	BOP1_N_dom
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR028598	BOP1/Erb1
IPR019775	WD40_repeat_CS
IPR017986	WD40_repeat_dom
IPR036322	WD40_repeat_dom_sf