prot_H-paniculata_contig370.9763.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig370.9763.1
Unique Nameprot_H-paniculata_contig370.9763.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length534
Homology
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BLAST of mRNA_H-paniculata_contig370.9763.1 vs. uniprot
Match: A0A6H5K330_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K330_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 6.070e-14
Identity = 111/321 (34.58%), Postives = 133/321 (41.43%), Query Frame = 0 
Query:  254 PGGRVPSRSLVTAAASAAVAASAAGEPSPRRAPSGGSPGSMLLSLAEFATKELLTMGD-----EPPWNDH-------------HSGASSRPTPP-PAIGSPKRHQSTRASSPA---------------VIVPAARTHGHHLRDRSA-ISRNRSGSSCRDXXXXXXXXXKRRSNVAYSLRARVRGGGVEDGDGGDGFQRRRSRPRSISMPEGMELHATRGWQAWRGGGQSTRMMRNDSRIEAIKEELDGHDGAP-STRSRAWRCGGSGGGVSASSYGSSGDLGMM--------GGGGGTEDIFGSVEDAQALIRLGRQRGRW 530
            PGG    R    + AS+  + S +  P PR A SGG     L SLA+ AT+EL TMGD      P  + H             +S +SS  TPP PA  SPKRH S R S                    V A  +        SA +   R+      X         R                    +GG G    R RPRS+SMPEGMEL A    +AW GG  S R  R   RI++IKEEL+GH+G+   TRSR WR G      S  S G  G+             G GGT      VEDA+ LI L RQR  W
Sbjct:  128 PGG--DPREAAVSIASSPSSFSLSTSPRPRSASSGGVASMRLQSLADLATQELQTMGDVDETDTPGIHGHRRHQQHQRSLSNGNSQSSSARTPPLPAGFSPKRHLSPRLSGGGGXXXXXXXXXXXXXXXXVSALSSAAXXXXXCSAPLPPARAAPXXXXXLRERGVPRSRHERXXXXXXXXXXXHAAARAEGGRGM---RHRPRSVSMPEGMELQA----RAWSGGYSSGR--RKSGRIDSIKEELEGHEGSTHGTRSRTWRAG------SGGSSGFDGEXXXXXXXXXXXKSGWGGT------VEDAETLIGLARQRVGW 425
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig370.9763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K330_9PHAE6.070e-1434.58CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig370contigH-paniculata_contig370:25852..32897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig370.9763.1mRNA_H-paniculata_contig370.9763.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig370 25739..32897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig370.9763.1 ID=prot_H-paniculata_contig370.9763.1|Name=mRNA_H-paniculata_contig370.9763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=534bp
MVHLSSAGSEGYMHRPWLSDKLAFLFRWCCVCSEHNDRTRCHFNIRESGM
LVRLDAEKAAALLLAVAPRCRSQSSDGGGQEGNDASNSVNGSSSPADLNP
NNNHQSNHMNNSIVGLGAGVHISSPSRATSSSQAPPSGSSFPHSKRQDQA
AAVGLTISSHSSGHGGVIGVGSSSLSPATFRYPCNGTVSEAGGGVTGGSG
VGLQAEMGNGWALNGNGGRDGVNGANGMGGISRLSSNSKMGPERGIRSYH
TGHPGGRVPSRSLVTAAASAAVAASAAGEPSPRRAPSGGSPGSMLLSLAE
FATKELLTMGDEPPWNDHHSGASSRPTPPPAIGSPKRHQSTRASSPAVIV
PAARTHGHHLRDRSAISRNRSGSSCRDDDDDDSDDGKRRSNVAYSLRARV
RGGGVEDGDGGDGFQRRRSRPRSISMPEGMELHATRGWQAWRGGGQSTRM
MRNDSRIEAIKEELDGHDGAPSTRSRAWRCGGSGGGVSASSYGSSGDLGM
MGGGGGTEDIFGSVEDAQALIRLGRQRGRWNGVG
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