prot_H-paniculata_contig3688.9738.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3688.9738.1
Unique Nameprot_H-paniculata_contig3688.9738.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length157
Homology
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BLAST of mRNA_H-paniculata_contig3688.9738.1 vs. uniprot
Match: D7FQK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK9_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.440e-62
Identity = 98/157 (62.42%), Postives = 120/157 (76.43%), Query Frame = 0 
Query:    1 IRELIKWERIVTGVFIALLLPLIWGAAVDMSPVTTPMTPVGYGKSWNFGWGRPCMHFMLAFVGVFLDYHPVARFSCILGMAQALVLDTLSSYDLGTMIDCVESGRCALPDGHSIWGLKLLNARDLVSVLLATWALLLIGHLSLVIGTCRIRYSFRQL 157
            ++ELI   R ++G FI LL PL W AA +  PV TP+T  G G SWN+GWGRP +HF L FVG+F+D H  AR SC++GM QA+VLDTLSSY LGT IDCV+SGRCA+P+  ++ GL+LL +RDL SV LATWALLL  +LSLVIG CR RY+FRQL
Sbjct:   21 LQELIVCYRCLSGAFILLLFPLFWVAASEARPVITPITSFGNGSSWNYGWGRPVLHFGLVFVGMFVDTHQAARLSCLVGMMQAIVLDTLSSYALGTQIDCVQSGRCAVPEHTTLSGLRLLQSRDLASVALATWALLLAYYLSLVIGMCRTRYNFRQL 177
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3688.9738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQK9_ECTSI1.440e-6262.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..148
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 48..66
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 7..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3688contigH-paniculata_contig3688:8163..8633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3688.9738.1mRNA_H-paniculata_contig3688.9738.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3688 8163..8633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3688.9738.1 ID=prot_H-paniculata_contig3688.9738.1|Name=mRNA_H-paniculata_contig3688.9738.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
IRELIKWERIVTGVFIALLLPLIWGAAVDMSPVTTPMTPVGYGKSWNFGW
GRPCMHFMLAFVGVFLDYHPVARFSCILGMAQALVLDTLSSYDLGTMIDC
VESGRCALPDGHSIWGLKLLNARDLVSVLLATWALLLIGHLSLVIGTCRI
RYSFRQL
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