prot_H-paniculata_contig36808.9725.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig36808.9725.1
Unique Nameprot_H-paniculata_contig36808.9725.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length56
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig36808.9725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..56
e-value: 3.5E-13
score: 51.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..56
NoneNo IPR availablePFAMPF13432TPR_16coord: 2..56
e-value: 1.8E-9
score: 38.1
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..56
score: 17.513

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig36808contigH-paniculata_contig36808:776..943 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig36808.9725.1mRNA_H-paniculata_contig36808.9725.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig36808 776..943 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig36808.9725.1 ID=prot_H-paniculata_contig36808.9725.1|Name=mRNA_H-paniculata_contig36808.9725.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp
LRKLGRNDEATAAFRRAAAMDPDNAHFQYKLGQHLRSTGCLAAAAEAYAR
ALELDP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom