prot_H-paniculata_contig3679.9720.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3679.9720.1
Unique Nameprot_H-paniculata_contig3679.9720.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length421
Homology
BLAST of mRNA_H-paniculata_contig3679.9720.1 vs. uniprot
Match: D8LE89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE89_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 2.330e-37
Identity = 183/435 (42.07%), Postives = 224/435 (51.49%), Query Frame = 0
Query:    1 MESAGALRHKRALPPHAGGPVLV-YKDCAIDHV--PSSSDTPASAKSGGTFYGPSSADQGSVVRSRSAA-CWLRVPLRECARNRVDDGAQARALLDAGAETEDTDVAGRTALHWAAARGNISVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAILDQPPTGSTSASVTD--------SSPAAA---RQNAHEESIADARNYYGSTALHRAAFNGREEVLKALLHGGAGVDMPGRSGRSALHLACRNVHPGCVEMLLAAGAFESLKSHDGSTPWSELASAAESRRSGDQTVERVAALLRRSHGRRAWGRRGWLVMLKAAQDCVRAESSGALLEKCLLPSTRSCGKSAPDHETDETGVARVPGVCGGITASDEMECVVEEQGWEGRREKDSSLSSVVSLLLNVGEEGTFRLVINFL 420
            M S G ++ +R LP H GGP    +    I+ +  P +++   S  S              V  + +A+  WL+ PLR+CARN  DDGA AR+LLDAGA T   D  GR+ LHWA  RGN +VV         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G A +  PP G+  AS+          S P AA   +QN   ESI DARN YGSTALHRAAFNGRE V+ ALL GGA V + G SGR                        ES  + DGSTPWS+LA AAE+R  G   V + A LL  + G RAW RRGWL+ML+   +    E+    L+          G +  D E                          + QG +  R        +V+ L+ +GEEG FRLV+ FL
Sbjct:   17 MISKGFVK-QRHLPQHTGGPPAAGHAGSPIESILNPDAANENRSPDSDQAXXXXXXXXXXQVQETGAASRTWLQSPLRDCARNADDDGALARSLLDAGAPTNFFDSTGRSPLHWACTRGNTAVV-------LAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFYGFAPIGLPP-GNVPASLVAPALEAEELSWPMAAPMPQQNG-VESIVDARNVYGSTALHRAAFNGREGVVLALLRGGADVCVVGNSGRXXXXXXXXXXXXXXXXXXXXXXXXESAIAKDGSTPWSQLALAAETRPRGCPRVAKTALLLNTARGARAWARRGWLLMLRDKHNRGVFEAEAIDLD--------GRGGACSDME--------------------------DGQGEDFAR--------LVNQLVGIGEEGCFRLVVGFL 399          
BLAST of mRNA_H-paniculata_contig3679.9720.1 vs. uniprot
Match: A0A6H5L7V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V4_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 7.040e-7
Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = 0
Query:  225 LKALLHGGAGVDMPGRSGRSALHLACRNVHPGCVEMLLAAGAFESLKSHDGSTPWSEL----ASAAESRRSGDQTVERVAALLRRSHGRRAWGRRGWLVMLKAAQDCVR 329
            +  LL  GA V +   +G ++LH+AC +V P  V++LL  GA E++   +G TP+S      A  AE      +T +R++ LL  +   R+W RRG+LVM +  QD +R
Sbjct:    1 MLTLLQLGADVHVRDSTGATSLHMACYDVEPEAVDLLLRWGADETVVDDEGHTPYSYHFPAGADEAEWDEENRRTYKRLSKLLTHAPQDRSWRRRGFLVMCRTHQDRLR 109          
BLAST of mRNA_H-paniculata_contig3679.9720.1 vs. uniprot
Match: D7FVJ3_ECTSI (Ankyrin repeat-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ3_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 6.300e-5
Identity = 48/140 (34.29%), Postives = 61/140 (43.57%), Query Frame = 0
Query:  213 LHRAAFNGREEVLKALLHGGAGVDMPGRSGRSALHLACRNVHPGCVEMLLAAGAFESLKSHDGSTPWSELASAAESRRSG-----------------------------DQTVERVAALLRRSHGRRAWGRRGWLVMLKA 323
            LH AA  G    L+ LL  GA VD   R GRSALH+AC     G VE+LL   A  SL   +G +P+  +A  A   R G                                 +R+  +LR +     WGRRGWLVM++A
Sbjct:  173 LHVAAKKGFCRPLERLLLAGAKVDCVDRVGRSALHVACFYNREGAVEVLLRHHASTSLLCDEGRSPFDMVAVDALETRQGRAMXXXXXXXXXXXXXGTSRTPCTLNAVETSVADRICGMLRNAS---KWGRRGWLVMMRA 309          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3679.9720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LE89_ECTSI2.330e-3742.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7V4_9PHAE7.040e-736.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVJ3_ECTSI6.300e-534.29Ankyrin repeat-containing protein, putative n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 104..119
score: 44.02
coord: 257..271
score: 34.84
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 241..272
e-value: 0.0028
score: 26.9
coord: 136..166
e-value: 85.0
score: 12.0
coord: 103..132
e-value: 5.1E-6
score: 36.0
coord: 208..237
e-value: 5.8E-4
score: 29.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 103..135
score: 13.971
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 208..240
score: 12.075
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 241..273
score: 9.725
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 136..160
score: 9.938
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 187..360
e-value: 3.0E-22
score: 81.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 55..174
e-value: 1.5E-23
score: 85.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 86..279
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 87..161
e-value: 5.1E-11
score: 43.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 87..278
score: 40.239
NoneNo IPR availablePFAMPF13637Ank_4coord: 210..262
e-value: 8.7E-9
score: 35.8
NoneNo IPR availablePANTHERPTHR24166FAMILY NOT NAMEDcoord: 86..290
coord: 88..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3679contigH-paniculata_contig3679:1937..9086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3679.9720.1mRNA_H-paniculata_contig3679.9720.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3679 1505..9139 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3679.9720.1 ID=prot_H-paniculata_contig3679.9720.1|Name=mRNA_H-paniculata_contig3679.9720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=421bp
MESAGALRHKRALPPHAGGPVLVYKDCAIDHVPSSSDTPASAKSGGTFYG
PSSADQGSVVRSRSAACWLRVPLRECARNRVDDGAQARALLDAGAETEDT
DVAGRTALHWAAARGNISVVHALLDAGANTRARDGAGSSPLHCAARAGYA
AVVEALLEWGCLYPSRQGAAILDQPPTGSTSASVTDSSPAAARQNAHEES
IADARNYYGSTALHRAAFNGREEVLKALLHGGAGVDMPGRSGRSALHLAC
RNVHPGCVEMLLAAGAFESLKSHDGSTPWSELASAAESRRSGDQTVERVA
ALLRRSHGRRAWGRRGWLVMLKAAQDCVRAESSGALLEKCLLPSTRSCGK
SAPDHETDETGVARVPGVCGGITASDEMECVVEEQGWEGRREKDSSLSSV
VSLLLNVGEEGTFRLVINFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom