prot_H-paniculata_contig36779.9718.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig36779.9718.1
Unique Nameprot_H-paniculata_contig36779.9718.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig36779.9718.1 vs. uniprot
Match: D8LBG4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBG4_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.260e-21
Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 0
Query:    1 MDRGRRAMPVQNKACYERHVQKCQDNHRQRLAKMKPTIDCQAPSS 45
            MDRGRRAMPVQNKACYERHV+KCQDNHR RLAKMKPTIDC APSS
Sbjct:    1 MDRGRRAMPVQNKACYERHVKKCQDNHRDRLAKMKPTIDCHAPSS 45          
BLAST of mRNA_H-paniculata_contig36779.9718.1 vs. uniprot
Match: A0A7S2WX22_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX22_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 8.330e-10
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 MDRGRRAMPVQNKACYERHVQKCQDNHRQRLAKMKPTIDCQAP 43
            MDR R+ MP+ NKACY+RHV+K Q+ HRQRLA MK +IDC  P
Sbjct:    1 MDRFRKVMPMGNKACYDRHVKKNQERHRQRLASMKCSIDCAPP 43          
BLAST of mRNA_H-paniculata_contig36779.9718.1 vs. uniprot
Match: A0A7S2P7L5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P7L5_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 5.670e-5
Identity = 25/43 (58.14%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 MDRGRRAMPVQNKACYERHVQKCQDNHRQRLAKMKPTIDCQAP 43
            MDRGR+AMPVQNKAC ERHV+K        L  MK +ID + P
Sbjct:    1 MDRGRKAMPVQNKACNERHVKKXXXXXXXXLRDMKSSIDNKEP 43          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig36779.9718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBG4_ECTSI1.260e-2193.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2WX22_9STRA8.330e-1065.12Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2P7L5_9STRA5.670e-558.14Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig36779contigH-paniculata_contig36779:928..1062 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig36779.9718.1mRNA_H-paniculata_contig36779.9718.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig36779 928..1062 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig36779.9718.1 ID=prot_H-paniculata_contig36779.9718.1|Name=mRNA_H-paniculata_contig36779.9718.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MDRGRRAMPVQNKACYERHVQKCQDNHRQRLAKMKPTIDCQAPSS
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