prot_H-paniculata_contig36610.9685.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig36610.9685.1
Unique Nameprot_H-paniculata_contig36610.9685.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length181
Homology
[Close]
BLAST of mRNA_H-paniculata_contig36610.9685.1 vs. uniprot
Match: A0A6H5JGQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ6_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 9.910e-5
Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:   90 MNFGSKFALHDSDDEEEEVREDVAPRGPLSSM 121
            MNFGS +ALHDSDDE+E V ED  P GPLSSM
Sbjct:    1 MNFGSAYALHDSDDEDERVIEDAPPSGPLSSM 32
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig36610.9685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGQ6_9PHAE9.910e-575.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig36610contigH-paniculata_contig36610:1043..1585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig36610.9685.1mRNA_H-paniculata_contig36610.9685.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig36610 1043..1587 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig36610.9685.1 ID=prot_H-paniculata_contig36610.9685.1|Name=mRNA_H-paniculata_contig36610.9685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp
FRLILYRYQVFNGAIHTSRTTERDKERKKESDRNRETERGRGIKHHRVYI
HCLSALSWRSVPDYNSSVRSLSLYVLQEGHITQQHNCGEMNFGSKFALHD
SDDEEEEVREDVAPRGPLSSMSVAMDENERADEASDNGAIGAASEWGPGA
QAVACSHDEPPPPPCEIGLGYGGGGIGYGGG
back to top