prot_H-paniculata_contig36603.9683.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig36603.9683.1
Unique Nameprot_H-paniculata_contig36603.9683.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length170
Homology
BLAST of mRNA_H-paniculata_contig36603.9683.1 vs. uniprot
Match: A0A6H5KAK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK0_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 5.830e-33
Identity = 61/168 (36.31%), Postives = 102/168 (60.71%), Query Frame = 0
Query:    1 KFTITDFGDTTQILGIDIAQEKERGTISISQHHYVVSLLKKFGMDDCNPVHTPGTAKGLTVDPEGNVLLDEHGSRDYQVIVGSFIFFTQSTRMDIAFDVSQAARFVVNPTSFHIGSVKRIFPYLKGAPNLKTTYSRDSNFELIGFCDASYGTGDPEKARSVSGSMYFL 168
            +F +TD G+  +ILGID+ ++ E+GT++ISQ HYV +LL++FGM + NPV TPG    ++ +   + +L     ++YQ + GS ++  Q TR D+++   Q ++   NP   ++ + K +  YL+G P L   Y R   F L  F D+S+G  +P+  RS +G ++FL
Sbjct:   80 RFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFL 245          
BLAST of mRNA_H-paniculata_contig36603.9683.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 2.040e-31
Identity = 60/168 (35.71%), Postives = 101/168 (60.12%), Query Frame = 0
Query:    1 KFTITDFGDTTQILGIDIAQEKERGTISISQHHYVVSLLKKFGMDDCNPVHTPGTAKGLTVDPEGNVLLDEHGSRDYQVIVGSFIFFTQSTRMDIAFDVSQAARFVVNPTSFHIGSVKRIFPYLKGAPNLKTTYSRDSNFELIGFCDASYGTGDPEKARSVSGSMYFL 168
            +F +TD G+  +ILGI + ++ E+GT++ISQ HYV +LL++FGM + NPV TPG    ++ +   + +L     ++YQ + GS ++  Q TR D+++   Q ++   NP   ++ + K +  YL+G P L   Y R   F L  F D+S+G  +P+  RS +G ++FL
Sbjct:   80 RFEMTDMGEVKRILGIGVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFL 245          
BLAST of mRNA_H-paniculata_contig36603.9683.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.010e-30
Identity = 58/168 (34.52%), Postives = 97/168 (57.74%), Query Frame = 0
Query:    1 KFTITDFGDTTQILGIDIAQEKERGTISISQHHYVVSLLKKFGMDDCNPVHTPGTAKGLTVDPEGNVLLDEHGSRDYQVIVGSFIFFTQSTRMDIAFDVSQAARFVVNPTSFHIGSVKRIFPYLKGAPNLKTTYSRDSNFELIGFCDASYGTGDPEKARSVSGSMYFL 168
             F +TD G+  +++GI++ ++ E GT++ISQ  Y   +L+++GM+  NPV TPG    L+ +   + LL     + +Q I GS ++  Q TR D+++ V Q  R   NP   H+ + K +  YL+G P+L   Y +   F L  F D+S+G  +P+  RS +G ++FL
Sbjct:    3 SFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFL 168          
BLAST of mRNA_H-paniculata_contig36603.9683.1 vs. uniprot
Match: A0A6H5JPQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ2_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 1.040e-30
Identity = 59/165 (35.76%), Postives = 98/165 (59.39%), Query Frame = 0
Query:    4 ITDFGDTTQILGIDIAQEKERGTISISQHHYVVSLLKKFGMDDCNPVHTPGTAKGLTVDPEGNVLLDEHGSRDYQVIVGSFIFFTQSTRMDIAFDVSQAARFVVNPTSFHIGSVKRIFPYLKGAPNLKTTYSRDSNFELIGFCDASYGTGDPEKARSVSGSMYFL 168
            +TD G+  +ILGID+ ++ ++GT+ ISQ HYV +LL++FGM + NPV TPG    ++ +   + +L     + YQ + GS ++  Q TR D+++   Q ++   NP   ++ + K +  YL+G P L   Y R   F L  F D+S+G  +P+  RS +G ++FL
Sbjct:    1 MTDIGEVKRILGIDVQRDYKQGTLVISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFL 163          
BLAST of mRNA_H-paniculata_contig36603.9683.1 vs. uniprot
Match: A0A6H5KGS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGS8_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.850e-30
Identity = 61/169 (36.09%), Postives = 100/169 (59.17%), Query Frame = 0
Query:    1 KFTITDFGDTTQILGIDIAQEKERGTISISQHHYVVSLLKKFGMDDCNPVHTPGTAKGLTVDPEGNVLLDEHGSRDYQVIVGSFIFFTQSTRMDIAFDVSQAARFVVNPTSFHIGSVKRIFPYLKGAPNLKTTYSRDSNFELIGFCDASYGTGDPEKARSVSGSMYFLS 169
            +F +TD G+  +ILGID+ ++ E+GT++ISQ HYV +LL++FGM + NPV TPG    ++ +   + +L     + YQ + GS ++  Q TR D+++   Q ++   NP   ++ + K +  YL+G P L   Y R   F L  F D+S+G  +P+  RS +G +  LS
Sbjct:  155 RFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYISLLS 321          
BLAST of mRNA_H-paniculata_contig36603.9683.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.190e-30
Identity = 61/168 (36.31%), Postives = 101/168 (60.12%), Query Frame = 0
Query:    1 KFTITDFGDTTQILGIDIAQEKERGTISISQHHYVVSLLKKFGMDDCNPVHTPGTAKGLTVDPEGNVLLDEHGSRDYQVIVGSFIFFTQSTRMDIAFDVSQAARFVVNPTSFHIGSVKRIFPYLKGAPNLKTTYSRDSNFELIGFCDASYGTGDPEKARSVSGSMYFL 168
            +F +TD G+  +ILGID+ ++ E+GT++ISQ HYV +LL++FGM + NPV TPG    ++ +   + +L     + YQ + GS ++  Q TR D+++   Q ++   NP   ++ + K +  YL+G P L   Y R   F L  F D+S+G  +P+  RS +G ++FL
Sbjct:  407 RFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFL 572          
BLAST of mRNA_H-paniculata_contig36603.9683.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.470e-30
Identity = 61/168 (36.31%), Postives = 101/168 (60.12%), Query Frame = 0
Query:    1 KFTITDFGDTTQILGIDIAQEKERGTISISQHHYVVSLLKKFGMDDCNPVHTPGTAKGLTVDPEGNVLLDEHGSRDYQVIVGSFIFFTQSTRMDIAFDVSQAARFVVNPTSFHIGSVKRIFPYLKGAPNLKTTYSRDSNFELIGFCDASYGTGDPEKARSVSGSMYFL 168
            +F +TD G+  +ILGID+ ++ E+GT++ISQ HYV +LL++FGM + NPV TPG    ++ +   + +L     + YQ + GS ++  Q TR D+++   Q ++   NP   ++ + K +  YL+G P L   Y R   F L  F D+S+G  +P+  RS +G ++FL
Sbjct:  563 RFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFL 728          
BLAST of mRNA_H-paniculata_contig36603.9683.1 vs. uniprot
Match: A0A535F5I8_9CHLR (DDE-type integrase/transposase/recombinase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F5I8_9CHLR)

HSP 1 Score: 124 bits (311), Expect = 8.810e-30
Identity = 64/151 (42.38%), Postives = 90/151 (59.60%), Query Frame = 0
Query:    1 KFTITDFGDTTQILGIDIAQEKERGTISISQHHYVVSLLKKFGMDDCNPVHTP-GTAKGLTVDPEGNVLLDEHGSRDYQVIVGSFIFFTQSTRMDIAFDVSQAARFVVNPTSFHIGSVKRIFPYLKGAPNLKTTYSRDSNFELIGFCDASY 150
            KF I D G+ T  LGI+I +++  GT+ I Q  Y  SLLKK+GMD+CNP   P   +  LTV+ +   +LD  G   YQ ++GS  +  Q TR D+A+ VS  +RF+  PT+ H G  K +  YLKGA +L  TY RD+   L  + D++Y
Sbjct:  820 KFHIKDLGEATDYLGIEIVRDRAAGTLKIHQTKYCRSLLKKYGMDECNPSRIPIHDSTKLTVNDQDKEILDAEGIHRYQSVIGSLTYAMQGTRADLAYAVSLCSRFLAKPTATHAGIAKGVLRYLKGAIDLGITYYRDNTENLFVYTDSNY 970          
BLAST of mRNA_H-paniculata_contig36603.9683.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 4.130e-29
Identity = 60/174 (34.48%), Postives = 101/174 (58.05%), Query Frame = 0
Query:    1 KFTITDFGDTTQILGIDIAQEKERGTISISQHHYVVSLLKKFGMDDCNPVHTPGTAKGLTVDPEGNVLLDEHGSRDYQVIVGSFIFFTQSTRMDIAFDVSQAARFVVNPTSFHIGSVKRIFPYLKGAPNLKTTYSRDS------NFELIGFCDASYGTGDPEKARSVSGSMYFL 168
            +F +TD G+  +ILGID+ ++ E+GT++ISQ HYV +LL++FGM + NPV TPG    ++ +   + +L     + YQ + GS ++  Q TR D+++   Q ++   NP   ++ + K +  YL+G P L   Y R+          L  F D+S+G  +P+  RS +G ++FL
Sbjct:  786 RFEMTDMGEVKRILGIDVPRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKREQIRLAAEQIRLAAFTDSSFGA-NPDNGRSTTGYLFFL 958          
BLAST of mRNA_H-paniculata_contig36603.9683.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 4.260e-29
Identity = 58/168 (34.52%), Postives = 97/168 (57.74%), Query Frame = 0
Query:    1 KFTITDFGDTTQILGIDIAQEKERGTISISQHHYVVSLLKKFGMDDCNPVHTPGTAKGLTVDPEGNVLLDEHGSRDYQVIVGSFIFFTQSTRMDIAFDVSQAARFVVNPTSFHIGSVKRIFPYLKGAPNLKTTYSRDSNFELIGFCDASYGTGDPEKARSVSGSMYFL 168
             F +TD G+  +++GI++ ++ E GT++ISQ  Y   +L+++GM+  NPV TPG    L+ +   + LL     + +Q I GS ++  Q TR D+++ V Q  R   NP   H+ + K +  YL+G P+L   Y +   F L  F D+S+G  +P+  RS +G ++FL
Sbjct: 1219 SFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFL 1384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig36603.9683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAK0_9PHAE5.830e-3336.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KUJ3_9PHAE2.040e-3135.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KC04_9PHAE1.010e-3034.52Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPQ2_9PHAE1.040e-3035.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGS8_9PHAE1.850e-3036.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF89_9PHAE2.190e-3036.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE2.470e-3036.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A535F5I8_9CHLR8.810e-3042.38DDE-type integrase/transposase/recombinase (Fragme... [more]
A0A6H5JJR8_9PHAE4.130e-2934.48Integrase catalytic domain-containing protein n=11... [more]
A0A6H5KHG5_9PHAE4.260e-2934.52Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..53
e-value: 2.0E-8
score: 34.2
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 33..170
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 33..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig36603contigH-paniculata_contig36603:26..535 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig36603.9683.1mRNA_H-paniculata_contig36603.9683.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig36603 26..535 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig36603.9683.1 ID=prot_H-paniculata_contig36603.9683.1|Name=mRNA_H-paniculata_contig36603.9683.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp
KFTITDFGDTTQILGIDIAQEKERGTISISQHHYVVSLLKKFGMDDCNPV
HTPGTAKGLTVDPEGNVLLDEHGSRDYQVIVGSFIFFTQSTRMDIAFDVS
QAARFVVNPTSFHIGSVKRIFPYLKGAPNLKTTYSRDSNFELIGFCDASY
GTGDPEKARSVSGSMYFLSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like