prot_H-paniculata_contig36596.9679.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig36596.9679.1
Unique Nameprot_H-paniculata_contig36596.9679.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length125
Homology
BLAST of mRNA_H-paniculata_contig36596.9679.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 89.0 bits (219), Expect = 1.590e-18
Identity = 42/107 (39.25%), Postives = 64/107 (59.81%), Query Frame = 0
Query:   17 PVRFSDIKKLTHKRLWHEAVRVEFEGLESLKAWTYVDSVRKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFVPTVAASSVKMVIAVAVENDW 123
            PV + +  K      W EA+  E + +E    WT V ++ KG   +SA+W+F  K+DE+GNV + KARLVARG+SQ+  +D+ E F P V   +V+ ++A A  N +
Sbjct:  174 PVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKY 280          
BLAST of mRNA_H-paniculata_contig36596.9679.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI)

HSP 1 Score: 89.0 bits (219), Expect = 4.080e-18
Identity = 42/107 (39.25%), Postives = 64/107 (59.81%), Query Frame = 0
Query:   17 PVRFSDIKKLTHKRLWHEAVRVEFEGLESLKAWTYVDSVRKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFVPTVAASSVKMVIAVAVENDW 123
            PV + +  K      W EA+  E + +E    WT V ++ KG   +SA+W+F  K+DE+GNV + KARLVARG+SQ+  +D+ E F P V   +V+ ++A A  N +
Sbjct:  549 PVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKY 655          
BLAST of mRNA_H-paniculata_contig36596.9679.1 vs. uniprot
Match: A0A5A7SSH2_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7SSH2_CUCME)

HSP 1 Score: 85.9 bits (211), Expect = 1.480e-17
Identity = 42/117 (35.90%), Postives = 67/117 (57.26%), Query Frame = 0
Query:    7 LGYVTDTEEPPVRFSDIKKLTHKRLWHEAVRVEFEGLESLKAWTYVDSVRKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFVPTVAASSVKMVIAVAVENDW 123
            LG  TD    P+ F D+        W  A+  E + +E  K WT ++ +  G+  +  +WV+  K +E G V K KARLVA+G+SQQH +D+ +VF P     +++M++A+A + DW
Sbjct:  106 LGVSTD----PICFEDV---VQNENWRLAMDNEIKSIEKNKTWTLIE-LPSGAKRIGVKWVYKTKYNEHGKVDKNKARLVAKGYSQQHEIDYTKVFAPVARMDTIRMIVALAAQKDW 214          
BLAST of mRNA_H-paniculata_contig36596.9679.1 vs. uniprot
Match: A0A0J7K788_LASNI (Retrotransposon ty1-copia subclass n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K788_LASNI)

HSP 1 Score: 85.1 bits (209), Expect = 3.080e-17
Identity = 40/94 (42.55%), Postives = 66/94 (70.21%), Query Frame = 0
Query:   29 KRLWHEAVRVEFEGLESLKAWTYVDSVRKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFVPTVAASSVKMVIAVAVEND 122
            K  W EA++ E++ L+  +AW  VD +  G  VV+++W+F  K DE+GN T+ KARLVA+G +Q+H +D+ E F P V  S+++++++VA+E D
Sbjct:    6 KEQWLEAMKNEYKSLKQNEAWILVD-LPAGRRVVNSKWIFKIKKDEKGNTTRYKARLVAKGCTQRHGIDYFETFSPVVRTSTIRLLMSVAIEMD 98          
BLAST of mRNA_H-paniculata_contig36596.9679.1 vs. uniprot
Match: A0A6J1EPQ0_CUCMO (uncharacterized protein LOC111436713 n=1 Tax=Cucurbita moschata TaxID=3662 RepID=A0A6J1EPQ0_CUCMO)

HSP 1 Score: 81.6 bits (200), Expect = 3.170e-17
Identity = 40/119 (33.61%), Postives = 67/119 (56.30%), Query Frame = 0
Query:    7 LGYVTDTEEPPVRFSDIKKLTHKRLWHEAVRVEFEGLESLKAWTYVDSVRKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFVPTVAASSVKMVIAVAVENDWGM 125
            L  +T T +P    +  ++      W  A+  + E +E  + W  + ++ KG   +  +WVF  K++E G V K KARLVA+G++QQH +D+ EVF P     +++M+IA+A  N W +
Sbjct:   19 LVLLTSTTDP----TTFEEAVQSSKWRAAIDFKIEAIERNETWE-LTNLPKGMKKIGVKWVFKTKLNENGEVDKYKARLVAKGYAQQHGIDYTEVFAPMARWGTIRMIIALAAWNSWNV 132          
BLAST of mRNA_H-paniculata_contig36596.9679.1 vs. uniprot
Match: A0A4Y1RRK6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RRK6_PRUDU)

HSP 1 Score: 79.0 bits (193), Expect = 8.230e-17
Identity = 33/86 (38.37%), Postives = 56/86 (65.12%), Query Frame = 0
Query:   38 VEFEGLESLKAWTYVDSVRKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFVPTVAASSVKMVIAVAVENDW 123
            VE + +E    W  VD + KG   V  +W++  K++E+G V K KARLVA+G++Q+H +D+ EVF P     ++++V+++A +N W
Sbjct:    3 VEIKSIEKNGTWELVD-LPKGEKTVGVKWIYKTKLNEKGEVDKYKARLVAKGYTQEHGIDYAEVFAPVARLDTIRLVVSLAAQNSW 87          
BLAST of mRNA_H-paniculata_contig36596.9679.1 vs. uniprot
Match: A0A0L9TUK8_PHAAN (Uncharacterized protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9TUK8_PHAAN)

HSP 1 Score: 85.1 bits (209), Expect = 9.530e-17
Identity = 38/100 (38.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:   24 KKLTHKRLWHEAVRVEFEGLESLKAWTYVDSVRKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFVPTVAASSVKMVIAVAVENDW 123
            K+ +    W EA+  E + +E  K W   D+   G + +  +WVF  K++E GN+ K KARLVA+G+SQQ+ VD+ EVF P     +V++++A+A ++ W
Sbjct:  840 KEASQSIKWREAMNAEIQAIEKNKTWELTDAPT-GITPIGVKWVFKTKLNEHGNIEKHKARLVAKGYSQQYGVDYTEVFAPVARLDTVRVLLAIAAQHKW 938          
BLAST of mRNA_H-paniculata_contig36596.9679.1 vs. uniprot
Match: A0A5N6PI57_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PI57_9ASTR)

HSP 1 Score: 84.7 bits (208), Expect = 1.240e-16
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 0
Query:   13 TEEPPVRFSDIKKLTHKRLWHEAVRVEFEGLESLKAWTYVDSVRKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFVPTVAASSVKMVIAVAVENDW 123
            TEE PV F +  K+     W +A+  E   +E  K W  VD + KG   +  +WV+  K D +G +T+ KARLVA+G+ QQ  VD+ EVF P     +V++V+A+A + DW
Sbjct:  253 TEEEPVNFREAAKMKE---WAQAMEDEMASIERNKTWRLVD-LPKGCRPIGLKWVYKIKKDARGQITRYKARLVAKGYIQQQGVDYDEVFAPVARLETVRLVLALAAKKDW 359          
BLAST of mRNA_H-paniculata_contig36596.9679.1 vs. uniprot
Match: A0A2K3MC83_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MC83_TRIPR)

HSP 1 Score: 82.8 bits (203), Expect = 1.310e-16
Identity = 38/109 (34.86%), Postives = 65/109 (59.63%), Query Frame = 0
Query:   15 EPPVRFSDIKKLTHKRLWHEAVRVEFEGLESLKAWTYVDSVRKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFVPTVAASSVKMVIAVAVENDW 123
            E P+ ++D  K     +W +A+  E E +ES   W  +  +  G+  +  +WV+  K +E+G + K KARLVA+G+SQQH +D+ EVF P     +++ ++A+A  N+W
Sbjct:  122 EDPITYNDAAK---HEVWKKAMDTEIEAIESNDTWE-LTHLPTGAKKIGVKWVYKTKYNEEGKIEKHKARLVAKGYSQQHGIDYNEVFAPVARWDTIRTILAIAATNNW 226          
BLAST of mRNA_H-paniculata_contig36596.9679.1 vs. uniprot
Match: A0A699PHI9_TANCI (Ribonuclease H-like domain, reverse transcriptase, RNA-dependent DNA polymerase (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699PHI9_TANCI)

HSP 1 Score: 81.6 bits (200), Expect = 1.440e-16
Identity = 36/100 (36.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:   24 KKLTHKRLWHEAVRVEFEGLESLKAWTYVDSVRKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLEVFVPTVAASSVKMVIAVAVENDW 123
            K+ ++ + W EA++VE + +     W  + ++  G   +S +WVF  K DE GN+ K KARLVA+G+  +H +DF EVF P     ++++++A+A  N W
Sbjct:    9 KEASNDQKWIEAMKVELDFINRNNTWE-LTTLPTGHKAISLKWVFKTKKDENGNIIKHKARLVAKGYIHEHGIDFEEVFAPVARMKTIRLILAIAANNKW 107          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig36596.9679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7K416_LASNI1.590e-1839.25Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
A0A0J7KM48_LASNI4.080e-1839.25Integrase catalytic domain-containing protein n=2 ... [more]
A0A5A7SSH2_CUCME1.480e-1735.90Retrovirus-related Pol polyprotein from transposon... [more]
A0A0J7K788_LASNI3.080e-1742.55Retrotransposon ty1-copia subclass n=1 Tax=Lasius ... [more]
A0A6J1EPQ0_CUCMO3.170e-1733.61uncharacterized protein LOC111436713 n=1 Tax=Cucur... [more]
A0A4Y1RRK6_PRUDU8.230e-1738.37Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A0L9TUK8_PHAAN9.530e-1738.00Uncharacterized protein n=1 Tax=Phaseolus angulari... [more]
A0A5N6PI57_9ASTR1.240e-1639.64Integrase catalytic domain-containing protein n=1 ... [more]
A0A2K3MC83_TRIPR1.310e-1634.86Retrovirus-related Pol polyprotein from transposon... [more]
A0A699PHI9_TANCI1.440e-1636.00Ribonuclease H-like domain, reverse transcriptase,... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 48..123
e-value: 4.3E-16
score: 59.3
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 28..123
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 28..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig36596contigH-paniculata_contig36596:1839..2213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig36596.9679.1mRNA_H-paniculata_contig36596.9679.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig36596 1839..2214 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig36596.9679.1 ID=prot_H-paniculata_contig36596.9679.1|Name=mRNA_H-paniculata_contig36596.9679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
CGVDPPLGYVTDTEEPPVRFSDIKKLTHKRLWHEAVRVEFEGLESLKAWT
YVDSVRKGSSVVSARWVFAWKIDEQGNVTKPKARLVARGFSQQHNVDFLE
VFVPTVAASSVKMVIAVAVENDWGM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like