prot_H-paniculata_contig36560.9677.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig36560.9677.1
Unique Nameprot_H-paniculata_contig36560.9677.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length216
Homology
BLAST of mRNA_H-paniculata_contig36560.9677.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 2.780e-26
Identity = 77/224 (34.38%), Postives = 119/224 (53.12%), Query Frame = 0
Query:    3 VTSLGGSSYVMIIVHDYSRFQAVKFIKKKSDATAALQSYIAEYITPKGLK--IGAIRTDSGGEF-DGDFHLKLDENGISHELTPPDTPQYKGVAERRLGLLREKTIAL-MQDQTGGG------SEKLWVEAMNYACDIINMSCTLSIEGNVFLYEQWYGNTAPLEHLQPVGTVGYMRKIITEDKMAPRGEKCIMLCIFHNHPSGTVCVLNVKTGQIVKRQNVSW 216
            V S+GG  Y MI+  D++R   + F++ KSDA +A +S++A  +   G+   +  +R+D+GGEF  G+F    +E  I  E TP  +PQY GVAER LGL+ E  +A  +Q +   G      ++KLW EAM++AC+ +N +   +   +   YE WYG   P     P     Y  K     K+ P+GE C  +    +HP     VL  + G I + ++V+W
Sbjct:  341 VVSVGGKYYPMIVKDDFTRRAWIYFLRNKSDAASAFRSFLAS-VRADGIPSLVETVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYC-KWQRPSKLFPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRDVTW 560          
BLAST of mRNA_H-paniculata_contig36560.9677.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.290e-25
Identity = 78/228 (34.21%), Postives = 116/228 (50.88%), Query Frame = 0
Query:    2 RVTSLGGSSYVMIIVHDYSRFQAVKFIKKKSDATAALQSYIAEYIT---PKGLKIGAIRTDSGGEF-DGDFHLKLDENGISHELTPPDTPQYKGVAERRLGLLREKTIAL-MQDQT----GGGSEKLWVEAMNYACDIINMSCTLSIEGNVFLYEQWYGNTAPLEHLQPVGTVGYMR----KIITEDKMAPRGEKCIMLCIFHNHPSGTVCVLNVKTGQIVKRQNVSW 216
            RV SLGG  Y +I+  DY+R+  V F+K KSDA  A + Y+AE      P  + +  +R+D+GGEF +G+F     +  I  E TP  +P+Y GVAER LGL+++  +A  +Q  T          LW EA+ ++C+ +N + T S       YE W+G+  P     P  T  +++    K+    K  P+ +KC  L    N     V +LN K   I  R N +W
Sbjct:  745 RVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPP-----PGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAITTR-NFTW 964          
BLAST of mRNA_H-paniculata_contig36560.9677.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.290e-25
Identity = 78/228 (34.21%), Postives = 116/228 (50.88%), Query Frame = 0
Query:    2 RVTSLGGSSYVMIIVHDYSRFQAVKFIKKKSDATAALQSYIAEYIT---PKGLKIGAIRTDSGGEF-DGDFHLKLDENGISHELTPPDTPQYKGVAERRLGLLREKTIAL-MQDQT----GGGSEKLWVEAMNYACDIINMSCTLSIEGNVFLYEQWYGNTAPLEHLQPVGTVGYMR----KIITEDKMAPRGEKCIMLCIFHNHPSGTVCVLNVKTGQIVKRQNVSW 216
            RV SLGG  Y +I+  DY+R+  V F+K KSDA  A + Y+AE      P  + +  +R+D+GGEF +G+F     +  I  E TP  +P+Y GVAER LGL+++  +A  +Q  T          LW EA+ ++C+ +N + T S       YE W+G+  P     P  T  +++    K+    K  P+ +KC  L    N     V +LN K   I  R N +W
Sbjct:  580 RVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPP-----PGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAITTR-NFTW 799          
BLAST of mRNA_H-paniculata_contig36560.9677.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.300e-25
Identity = 78/228 (34.21%), Postives = 116/228 (50.88%), Query Frame = 0
Query:    2 RVTSLGGSSYVMIIVHDYSRFQAVKFIKKKSDATAALQSYIAEYIT---PKGLKIGAIRTDSGGEF-DGDFHLKLDENGISHELTPPDTPQYKGVAERRLGLLREKTIAL-MQDQT----GGGSEKLWVEAMNYACDIINMSCTLSIEGNVFLYEQWYGNTAPLEHLQPVGTVGYMR----KIITEDKMAPRGEKCIMLCIFHNHPSGTVCVLNVKTGQIVKRQNVSW 216
            RV SLGG  Y +I+  DY+R+  V F+K KSDA  A + Y+AE      P  + +  +R+D+GGEF +G+F     +  I  E TP  +P+Y GVAER LGL+++  +A  +Q  T          LW EA+ ++C+ +N + T S       YE W+G+  P     P  T  +++    K+    K  P+ +KC  L    N     V +LN K   I  R N +W
Sbjct:  593 RVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPP-----PGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAITTR-NFTW 812          
BLAST of mRNA_H-paniculata_contig36560.9677.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.780e-25
Identity = 78/228 (34.21%), Postives = 116/228 (50.88%), Query Frame = 0
Query:    2 RVTSLGGSSYVMIIVHDYSRFQAVKFIKKKSDATAALQSYIAEYIT---PKGLKIGAIRTDSGGEF-DGDFHLKLDENGISHELTPPDTPQYKGVAERRLGLLREKTIAL-MQDQT----GGGSEKLWVEAMNYACDIINMSCTLSIEGNVFLYEQWYGNTAPLEHLQPVGTVGYMR----KIITEDKMAPRGEKCIMLCIFHNHPSGTVCVLNVKTGQIVKRQNVSW 216
            RV SLGG  Y +I+  DY+R+  V F+K KSDA  A + Y+AE      P  + +  +R+D+GGEF +G+F     +  I  E TP  +P+Y GVAER LGL+++  +A  +Q  T          LW EA+ ++C+ +N + T S       YE W+G+  P     P  T  +++    K+    K  P+ +KC  L    N     V +LN K   I  R N +W
Sbjct:  736 RVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPP-----PGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNDKRRAITTR-NFTW 955          
BLAST of mRNA_H-paniculata_contig36560.9677.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 2.330e-25
Identity = 76/224 (33.93%), Postives = 119/224 (53.12%), Query Frame = 0
Query:    3 VTSLGGSSYVMIIVHDYSRFQAVKFIKKKSDATAALQSYIAEYITPKGLK--IGAIRTDSGGEF-DGDFHLKLDENGISHELTPPDTPQYKGVAERRLGLLREKTIAL-MQDQTGGG------SEKLWVEAMNYACDIINMSCTLSIEGNVFLYEQWYGNTAPLEHLQPVGTVGYMRKIITEDKMAPRGEKCIMLCIFHNHPSGTVCVLNVKTGQIVKRQNVSW 216
            V S+GG  Y MI+  D++R   + F++ KSDA +A +S++A  +   G+   I  +R+D+GGEF  G+F    +E  I  E TP  +P++ GVAER LGL+ E  +A  +Q +   G      +++LW EAM++AC+ +N +   +   +   YE WYG   P     P     Y  K     K+ P+GE C  +    +HP     VL  + G I + +NV+W
Sbjct:  488 VASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLAN-VRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYC-KWQRPSKLLPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRNVTW 707          
BLAST of mRNA_H-paniculata_contig36560.9677.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 2.350e-25
Identity = 76/224 (33.93%), Postives = 119/224 (53.12%), Query Frame = 0
Query:    3 VTSLGGSSYVMIIVHDYSRFQAVKFIKKKSDATAALQSYIAEYITPKGLK--IGAIRTDSGGEF-DGDFHLKLDENGISHELTPPDTPQYKGVAERRLGLLREKTIAL-MQDQTGGG------SEKLWVEAMNYACDIINMSCTLSIEGNVFLYEQWYGNTAPLEHLQPVGTVGYMRKIITEDKMAPRGEKCIMLCIFHNHPSGTVCVLNVKTGQIVKRQNVSW 216
            V S+GG  Y MI+  D++R   + F++ KSDA +A +S++A  +   G+   I  +R+D+GGEF  G+F    +E  I  E TP  +P++ GVAER LGL+ E  +A  +Q +   G      +++LW EAM++AC+ +N +   +   +   YE WYG   P     P     Y  K     K+ P+GE C  +    +HP     VL  + G I + +NV+W
Sbjct:  464 VASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLAN-VRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYC-KWQRPSKLLPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRNVTW 683          
BLAST of mRNA_H-paniculata_contig36560.9677.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 3.160e-25
Identity = 75/224 (33.48%), Postives = 120/224 (53.57%), Query Frame = 0
Query:    3 VTSLGGSSYVMIIVHDYSRFQAVKFIKKKSDATAALQSYIAEYITPKGLK--IGAIRTDSGGEF-DGDFHLKLDENGISHELTPPDTPQYKGVAERRLGLLREKTIAL-MQDQTGGG------SEKLWVEAMNYACDIINMSCTLSIEGNVFLYEQWYGNTAPLEHLQPVGTVGYMRKIITEDKMAPRGEKCIMLCIFHNHPSGTVCVLNVKTGQIVKRQNVSW 216
            + S+GG  Y MI+  D++R   + F++ KSDA +A ++++A  +   G+   +  +R+D+GGEF  G+F    +E  I  E TP  +PQY GVAER LGL+ E  +A  +Q +   G      ++KLW EAM++AC+ +N +   +   ++  YE WYG   P     P     Y R      K+ P+GE C  +    +HP     VL  + G I + ++V+W
Sbjct:  258 IASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLAS-VRANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPY-PFLKPAYCRWQ-RPTKLLPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRDVTW 477          
BLAST of mRNA_H-paniculata_contig36560.9677.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 3.180e-25
Identity = 78/224 (34.82%), Postives = 118/224 (52.68%), Query Frame = 0
Query:    3 VTSLGGSSYVMIIVHDYSRFQAVKFIKKKSDATAALQSYIAEYITPKGLK--IGAIRTDSGGEF-DGDFHLKLDENGISHELTPPDTPQYKGVAERRLGLLREKTIAL-MQDQTGGG------SEKLWVEAMNYACDIINMSCTLSIEGNVFLYEQWYGNTAPLEHLQPVGTVGYMRKIITEDKMAPRGEKCIMLCIFHNHPSGTVCVLNVKTGQIVKRQNVSW 216
            V S+GG  Y MI+  D++R   + F+K KSDA  A +S++A  +   G+   +  +R+D+GGEF  G+F    +E  I  E TP  +PQY GVAER LGL+ E  +A  +Q +   G      ++KLW EAM++AC+ +N +   +   +   YE WYG   P     P     Y R      K+ P+GE C  +    +HP     VL  + G I + ++V+W
Sbjct:  737 VASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLAS-VRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRPARPY-PFLKPAYCRWQ-RPSKLLPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRDVTW 956          
BLAST of mRNA_H-paniculata_contig36560.9677.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 3.200e-25
Identity = 78/224 (34.82%), Postives = 118/224 (52.68%), Query Frame = 0
Query:    3 VTSLGGSSYVMIIVHDYSRFQAVKFIKKKSDATAALQSYIAEYITPKGLK--IGAIRTDSGGEF-DGDFHLKLDENGISHELTPPDTPQYKGVAERRLGLLREKTIAL-MQDQTGGG------SEKLWVEAMNYACDIINMSCTLSIEGNVFLYEQWYGNTAPLEHLQPVGTVGYMRKIITEDKMAPRGEKCIMLCIFHNHPSGTVCVLNVKTGQIVKRQNVSW 216
            V S+GG  Y MI+  D++R   + F+K KSDA  A +S++A  +   G+   +  +R+D+GGEF  G+F    +E  I  E TP  +PQY GVAER LGL+ E  +A  +Q +   G      ++KLW EAM++AC+ +N +   +   +   YE WYG   P     P     Y R      K+ P+GE C  +    +HP     VL  + G I + ++V+W
Sbjct:  444 VASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLAS-VRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRPARPY-PFLKPAYCRWQ-RPSKLLPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRDVTW 663          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig36560.9677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JB16_9PHAE2.780e-2634.38Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JTI6_9PHAE1.290e-2534.21Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JZQ8_9PHAE1.290e-2534.21Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE1.300e-2534.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.780e-2534.21Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5K622_9PHAE2.330e-2533.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH25_9PHAE2.350e-2533.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRL9_9PHAE3.160e-2533.48Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JBA7_9PHAE3.180e-2534.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE3.200e-2534.82Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 3..102
e-value: 1.3E-12
score: 47.9
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..163
score: 14.955
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 2..173
e-value: 1.0E-14
score: 56.2
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 6..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig36560contigH-paniculata_contig36560:792..1439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig36560.9677.1mRNA_H-paniculata_contig36560.9677.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig36560 570..1439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig36560.9677.1 ID=prot_H-paniculata_contig36560.9677.1|Name=mRNA_H-paniculata_contig36560.9677.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=216bp
MRVTSLGGSSYVMIIVHDYSRFQAVKFIKKKSDATAALQSYIAEYITPKG
LKIGAIRTDSGGEFDGDFHLKLDENGISHELTPPDTPQYKGVAERRLGLL
REKTIALMQDQTGGGSEKLWVEAMNYACDIINMSCTLSIEGNVFLYEQWY
GNTAPLEHLQPVGTVGYMRKIITEDKMAPRGEKCIMLCIFHNHPSGTVCV
LNVKTGQIVKRQNVSW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf