prot_H-paniculata_contig36546.9673.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig36546.9673.1
Unique Nameprot_H-paniculata_contig36546.9673.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length179
Homology
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BLAST of mRNA_H-paniculata_contig36546.9673.1 vs. uniprot
Match: D8LEK5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK5_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 3.870e-34
Identity = 92/179 (51.40%), Postives = 110/179 (61.45%), Query Frame = 0 
Query:    1 IHNKVAGAQDGVG-GPALSRSEALDLLAFVTDVAVSMGSLLQACNDGGDDNNVSAAGARPTSDPGVMGATAAEAGLSPALALRLQSCDGEVAPEGFAAALALTFEGSLPTLEGVLLGE----KVGVMSLPSVSITRFRLARQWLLRCLHYLMGLVFLHPLGVQQAPRQPSSPSASSSSD 174
            +H K+AGAQDG+G GP +  +EA D+L++VTDVAVS+GSLLQA +           G R     G         G+   LA RLQ  DGEV+PEG AAALALTFE +LP LEG LL      KVG     SV   R R+ARQWLLRCLH L+G VFL PLG+Q+A     SPS + S D
Sbjct:   87 VHAKMAGAQDGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQASS-----------GVRAVGSSGXXXXXXXXXGIG-LLAQRLQGSDGEVSPEGLAAALALTFEATLPALEGFLLAPTSSGKVGAPDSESVR-ARGRVARQWLLRCLHGLIGPVFLQPLGLQEA-----SPSVAGSGD 247
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BLAST of mRNA_H-paniculata_contig36546.9673.1 vs. uniprot
Match: A0A6H5L6J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J2_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 7.030e-31
Identity = 85/165 (51.52%), Postives = 101/165 (61.21%), Query Frame = 0 
Query:    1 IHNKVAGAQDGVG-GPALSRSEALDLLAFVTDVAVSMGSLLQACNDGGDDNNVSAAGARPTSDPGVMGATAAEAGLSPALALRLQSCDGEVAPEGFAAALALTFEGSLPTLEGVLLGE----KVGVMSLPSVSITRFRLARQWLLRCLHYLMGLVFLHPLGVQQA 160
            +H K+AGAQDG+G GP +  +EA D+L++VTDVAVS+GSLLQA                     GV    +   G    LA RLQ  DGEV+PEG AAALALTFE +LP LE  LL      KVG     SV   R R+ARQWLLRCLH L+G VFL PLG+Q+A
Sbjct:   34 VHAKMAGAQDGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQA-------------------SCGVRAVGSGAGGGIGLLAQRLQGSDGEVSPEGLAAALALTFEATLPALESFLLAPTSSGKVGAPDSESVR-ARGRVARQWLLRCLHGLIGPVFLQPLGLQEA 178
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig36546.9673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEK5_ECTSI3.870e-3451.40Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L6J2_9PHAE7.030e-3151.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 158..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig36546contigH-paniculata_contig36546:262..1063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig36546.9673.1mRNA_H-paniculata_contig36546.9673.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig36546 262..1063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig36546.9673.1 ID=prot_H-paniculata_contig36546.9673.1|Name=mRNA_H-paniculata_contig36546.9673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp
IHNKVAGAQDGVGGPALSRSEALDLLAFVTDVAVSMGSLLQACNDGGDDN
NVSAAGARPTSDPGVMGATAAEAGLSPALALRLQSCDGEVAPEGFAAALA
LTFEGSLPTLEGVLLGEKVGVMSLPSVSITRFRLARQWLLRCLHYLMGLV
FLHPLGVQQAPRQPSSPSASSSSDSRAGG
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