prot_H-paniculata_contig3433.9166.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3433.9166.1
Unique Nameprot_H-paniculata_contig3433.9166.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1554
Homology
BLAST of mRNA_H-paniculata_contig3433.9166.1 vs. uniprot
Match: D8LHP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP8_ECTSI)

HSP 1 Score: 535 bits (1378), Expect = 1.350e-165
Identity = 394/634 (62.15%), Postives = 435/634 (68.61%), Query Frame = 0
Query:  511 DGSVCVEVPVGREDEGLLLGGGRVLHKLKEELGGTLEYRRGEGVVLVYGQQSEGGPAKAAACVRTALLLSDGGGGARAEEYAMARLSMDDLLAECIALKGLRQTGGGARGNLNNSWASSSP-----------------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAT--SNIPEGEYPPEPGSLRIIGETFGCVIDVAGEVAAEXXXXXXXXXXXXXXXXXXXXXNRESHHLVRPVGSATRVRPQDVLIWGPSGSVVEAKEAVAALVSGNACSEVVVGAARIKRRDRGFWVNCETM--ASSVTIEVDHKRGSVWVRGRPEAVEEGRKDFQNKLASLFPGDFLAVPMPRAALKDLANIKDLASAAAEARADHKKKSQAVNSKNDKDGSNVDGLG-MIDCADEEGGVELWADWPCSCVRLRGEPASVRCAAKALYASLAEWKALEVSVRVDRAIVTRLLSRSGRILAGISSNMGITLLVEREKGVLRGRARTELDAKEANRVLKLKVNALSLRRPELHPPRTVVPSTAPRSSPILVVSPALSDI-SEISAGSSSXXXXXXXXXXXXXXXXXIHERELTDPFDELQAFFAGESLPNACSSSTEGKKRSCVFDGVEDVPS 1121
            DG   +E+PVGREDEGLLLGGGRVLHKLKEELGGTLEYRR  GVV VYGQQ  GGP KAAACVRTALLL  G G  RA++Y +ARL MDDLLAECIALKGL+Q G  + G  + S A++ P                 D        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T  SN+P+GEYPPE  SLRIIGE FGCVIDV GE AA XXXXXXXXXXXXX          ++   ++ VGSAT V  QD+LIWGP+G V EAK+AV +LVSG+A +EVVVG  RI RRDRGFWVNCETM      ++EVDHKRG V VRG PE VEEGRK+FQ+KLASLFPGDFLAVPMPRAALKDLA+ + L  AA++A                     VDG     D  DE GGVELWADWP SCVRLRGEPA+VR AAKALYA+LA W  LEVSV VDRAIVTRLLSRSGRILAGISSNMGITLLVEREKGVLRGRAR E +AKEANRVLKLK+   +L +           + A   +P+L  SP LS   SE S  S                       ELTD F+ELQAFF G        S+    KRSCVFDGVEDVPS
Sbjct:   44 DGMRPIEIPVGREDEGLLLGGGRVLHKLKEELGGTLEYRRSHGVVCVYGQQ--GGPRKAAACVRTALLLRSGRGEPRADKYDLARLCMDDLLAECIALKGLKQAGTASPGTSSTSSATTCPGSYSDEGGSEGSCSPGTDPWSPIQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTVASNLPDGEYPPETSSLRIIGEKFGCVIDVVGEAAAXXXXXXXXXXXXXXEGGRGGA-GADAISPLQAVGSATPVGHQDILIWGPAGVVGEAKDAVCSLVSGSASAEVVVGVGRIGRRDRGFWVNCETMPGGGGASLEVDHKRGVVVVRGLPEEVEEGRKEFQDKLASLFPGDFLAVPMPRAALKDLADAQGLTRAASQAGV-------------------VDGRDERPDGCDEAGGVELWADWPFSCVRLRGEPATVRRAAKALYAALAVWNTLEVSVTVDRAIVTRLLSRSGRILAGISSNMGITLLVEREKGVLRGRARNEDEAKEANRVLKLKLKVAALAQRRSEQMNAANSAAAAPKAPVL--SPGLSSTHSERSCASVEDGPRL----------------ELTDAFEELQAFFGGGPPDGGVPSAPT--KRSCVFDGVEDVPS 635          
BLAST of mRNA_H-paniculata_contig3433.9166.1 vs. uniprot
Match: D7FTS7_ECTSI (KH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS7_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 5.800e-25
Identity = 100/288 (34.72%), Postives = 145/288 (50.35%), Query Frame = 0
Query:  756 VLIWGPSGSVVEAKEAVAALVSGNACSEVVVGAARIKRRDRGFWVNCETMASSVTIEVDHKRGSVWVRGRPEAVEEGRKDFQNKLASLFPGDFLAVPMPRAALKDLANIKDLASAAAEAR---------ADHKKKSQAVNSKNDKDGSNVDGLGMIDCADE------EGGVELWADWPCSCVRLRGEPASVRCAAKALYASLAEWKALEVSVRVDRAIVTRLLSRSGRILAGISSNMGITLLVEREKGVLRGRARTELDAKEANRVLKLKVNALSLRRPELHPPRTVV 1028
            V+I G  G V +A++A+ ALV G    EV +G           W   +  +  VTI  D  R S+ V G P AVE  R++    LA  F G+F+AVP+PR AL ++A    LA AAA             D K+ + A        G   + LG +  A        EG V+L ADWPCSCVR+RGE A+V  A   +  +L++W AL V+  V+  +   L  +  + +  +S +MG  +L   + GV  GRA +E +A++A R L+ +V+ L  RR  +  P  VV
Sbjct:  369 VMIRGLPGLVDKARDALVALVLGREDGEVALGEEAAAALGADSWRKIQDSSERVTITPDRSRCSLRVSGPPAAVEACRRELYTMLADAFRGEFVAVPIPREALHEVATPLRLADAAAXXXXXXXSSPRTGDGKRTAAAA-------GQIAEVLGPMGVAAAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVGEINTALSKWSALAVAAEVEEWMEPELFGKQRKAIKKLSQSMGGVVLNVVD-GVCSGRAASEEEARDATRKLEERVSELRARRAVVRVPPEVV 648          
BLAST of mRNA_H-paniculata_contig3433.9166.1 vs. uniprot
Match: A0A6H5L0D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D2_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.080e-23
Identity = 101/288 (35.07%), Postives = 142/288 (49.31%), Query Frame = 0
Query:  756 VLIWGPSGSVVEAKEAVAALVSGNACSEVVVGAARIKRRDRGFWVNCETMASSVTIEVDHKRGSVWVRGRPEAVEEGRKDFQNKLASLFPGDFLAVPMPRAALKDLANIKDLASAA---------AEARADHKKKSQAVNSKNDKDGSNVDGLGMIDCADE------EGGVELWADWPCSCVRLRGEPASVRCAAKALYASLAEWKALEVSVRVDRAIVTRLLSRSGRILAGISSNMGITLLVEREKGVLRGRARTELDAKEANRVLKLKVNALSLRRPELHPPRTVV 1028
            V+I G  G V +A++A+ ALV G    EV +G           W   +  +  VTI  D  R S+ V G P AVE  RK+    LA    G F+AVP+PR AL ++A    LA AA         +    D K+ + A        G   + LG    A        EG V+L ADWPCSCVR+RGE A+V  A   +  +L+ W AL V+  V+  +   LL +  + +  +S +MG  +L   + GV  GRA +E +A++A R L+ +VN L  RR  +  P  VV
Sbjct: 1060 VMIRGLPGQVDKARDALVALVLGWEDGEVALGEEGAAALGADSWRKIQDSSGRVTITPDKSRCSLRVSGPPAAVEACRKELYTMLADASRGKFVAVPIPREALHEVATSLRLADAAXXXXXXXXSSPKTGDGKRTAAAA-------GQIAEVLGPTGIASAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEINTALSMWSALTVTAEVEEWMEPELLGKQRKAIKKLSQSMGGVVLNVVD-GVCCGRAASEEEARDATRKLEERVNELRARRAVVRVPPEVV 1339          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3433.9166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHP8_ECTSI1.350e-16562.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTS7_ECTSI5.800e-2534.72KH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5L0D2_9PHAE1.080e-2335.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3433contigH-paniculata_contig3433:494..12253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3433.9166.1mRNA_H-paniculata_contig3433.9166.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3433 56..12844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3433.9166.1 ID=prot_H-paniculata_contig3433.9166.1|Name=mRNA_H-paniculata_contig3433.9166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1554bp
MLLDTVAVADISAGEGAGWEGGERLDDLEFITCATEDTAMHIDNSNSATV
TPIAGQSNDAHRILTADLGLTDQDEKPSRLKEANEGRGMEATRYRMEDKQ
RCCCSGTSGIKITDGSSITSSVNLGQQIQDLELRCKAETASRVAAEARAE
SAEALLVEARARISFLEVALDESSHGFRASCERDDGQRQSSQQVLEKAEE
LFDPSNFNGVRDATEILLLKASTQVQNLEVLTPGLSVSKPSQGAESDGTA
DTTINDDDDEDDHTQLNQSQPRNQKLEQLKNITRRSRGFQSRSCHDPVSA
SSSASTSRASSPHDSDGSGSSSTYCTSPTGTRSTISSSASSSSGRSSFGD
DSAPPAINDVPASAGGHIISPIVRTSSSCNSGNNAAHDHGPTATQKCCSS
ASARVAGSIGVKSSRSGQPPVSSSLATNGGLQTAEVTGISATIVESASLT
DGREISGGGHDRLVSTGAVRSNREGGASRKECGTRRGQGTTTSPGKGRKG
HGRHHGPDCADGSVCVEVPVGREDEGLLLGGGRVLHKLKEELGGTLEYRR
GEGVVLVYGQQSEGGPAKAAACVRTALLLSDGGGGARAEEYAMARLSMDD
LLAECIALKGLRQTGGGARGNLNNSWASSSPDPRPSVPPPATLTPKAKLA
AATTAAVAIPIPIGGAAAPAVGVAVAATSNIPEGEYPPEPGSLRIIGETF
GCVIDVAGEVAAEAAAAVATATGGVATGGSNGGGNRESHHLVRPVGSATR
VRPQDVLIWGPSGSVVEAKEAVAALVSGNACSEVVVGAARIKRRDRGFWV
NCETMASSVTIEVDHKRGSVWVRGRPEAVEEGRKDFQNKLASLFPGDFLA
VPMPRAALKDLANIKDLASAAAEARADHKKKSQAVNSKNDKDGSNVDGLG
MIDCADEEGGVELWADWPCSCVRLRGEPASVRCAAKALYASLAEWKALEV
SVRVDRAIVTRLLSRSGRILAGISSNMGITLLVEREKGVLRGRARTELDA
KEANRVLKLKVNALSLRRPELHPPRTVVPSTAPRSSPILVVSPALSDISE
ISAGSSSGGSSNGGGSDQDVVEEDIHERELTDPFDELQAFFAGESLPNAC
SSSTEGKKRSCVFDGVEDVPSISSTTENCSDDGSSSGNSNTRNGKSIAAG
TATVVSRGTNRLLQRSSSARLAPVRYAAPSPRTVAQAGASLANPNSSHIN
HSGDGGESRSTPVSGIFASNIRSLPPPPLPVVHPGLVRAYIHQQDCVYPS
PHPRRSSHHMHRPEAFASGGITVESSSSSDVIYPGANTSFRRGSDPGPEP
FEHHSNVLPGAAAPHRSCGLSSPPMHPQHQHTSRYPVYQSRRQTVWPVSG
SAVSIDQYSNGDGNGGGGGGSMHPGQHVRSRVSPYETAPSANRVEDASHG
RHHRQLHHQEIPYSECEEGWGGDGRVEAEAENWAYNPRSQVLSRPGSVRS
IMNSHDSYSREEVHHGSYDADAPRDYAVMCGEVDEGSSAFIARGGSVYGE
SGGGGRVVGHDYEYEIALRQRQVRQMCGNTPVSERCSLPVASRGVGRGSM
RGW*
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