prot_H-paniculata_contig333.8918.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig333.8918.1
Unique Nameprot_H-paniculata_contig333.8918.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length132
Homology
BLAST of mRNA_H-paniculata_contig333.8918.1 vs. uniprot
Match: D8LJX0_ECTSI (MutS protein homolog 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX0_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 2.040e-55
Identity = 101/127 (79.53%), Postives = 113/127 (88.98%), Query Frame = 0
Query:    1 VASLSERAREAVRSALLITHGIVQNLAEDIRVEGLDSLFAVAESVALLDMIFGFADLVTLSPLNFCRPKLTTEGPMIIRGGRHPIVGAVQE-CKFVPNDT---PFMNFRVVTGPNNSGKSTYLKQAG 123
            V+SLS+RA EAVR+ALLITH ++Q LA++IR E LD+LFAV ESVALLDMIFGFADLVTLSPL FCRP++T +GPM IRGGRHPIVGAVQE  KFVPNDT   PF+NFRVVTGPNNSGKSTYLKQAG
Sbjct:  444 VSSLSDRANEAVRTALLITHDVIQTLADEIRTEALDALFAVTESVALLDMIFGFADLVTLSPLAFCRPEVTADGPMSIRGGRHPIVGAVQEDWKFVPNDTYMSPFINFRVVTGPNNSGKSTYLKQAG 570          
BLAST of mRNA_H-paniculata_contig333.8918.1 vs. uniprot
Match: A0A6H5JUC5_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC5_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 2.350e-48
Identity = 97/162 (59.88%), Postives = 112/162 (69.14%), Query Frame = 0
Query:    1 VASLSERAREAVRSALLITHGIVQNLAEDIRVEGLDSLFAVAESVALLDMIFGFADLVTLSPLNFCRPKLTTEGPMIIRGGRHPIVGAVQE-CK-----------------------------------FVPND---TPFMNFRVVTGPNNSGKSTYLKQAG 123
            V+SLS+RA EAVR+ALLITH ++Q LA++IR E LD+LFAV ESVALLDMIFGFADLVTLSPL FCRP++T +GPM IRGGRHPIVGAVQE CK                                    +P+    +PF+NFRVVTGPNNSGKSTYLKQAG
Sbjct:   72 VSSLSDRANEAVRTALLITHDVIQMLADEIRTEALDALFAVTESVALLDMIFGFADLVTLSPLAFCRPEVTADGPMSIRGGRHPIVGAVQEDCKSANVSLSAPPGKSMRVIVRHLHIRCVFFAFSASSFLLPSFAFFSPFINFRVVTGPNNSGKSTYLKQAG 233          
BLAST of mRNA_H-paniculata_contig333.8918.1 vs. uniprot
Match: A0A836CNW6_9STRA (Muts protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNW6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.020e-29
Identity = 70/126 (55.56%), Postives = 89/126 (70.63%), Query Frame = 0
Query:    1 VASLSERAREAVRSALLITHGIVQNLAEDIRVEGLDSLFAVAESVALLDMIFGFADLVTLSPLNFCRPKLTTEGPMIIRGGRHPIVGAVQEC--KFVPNDT---PFMNFRVVTGPNNSGKSTYLKQ 121
            VASLS+RA EA+  ALL+T+ ++Q+L E +R   ++SLFAV ESVALLDM+FGFADLV  S L + RP L  +G ++I  G HPIVGA+ +   +FVPN     P  NF VVTG N SGKST L+Q
Sbjct:  511 VASLSDRANEALGEALLLTNQVIQDLMETVR-RHMESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQ 635          
BLAST of mRNA_H-paniculata_contig333.8918.1 vs. uniprot
Match: T0S8L0_SAPDV (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S8L0_SAPDV)

HSP 1 Score: 104 bits (259), Expect = 2.160e-23
Identity = 56/126 (44.44%), Postives = 84/126 (66.67%), Query Frame = 0
Query:    1 VASLSERAREAVRSALLITHGIVQNLAEDIRVEGLDSLFAVAESVALLDMIFGFADLVTLSPLN--FCRPKLTTEGPMIIRGGRHPIVG-AVQECKFVPNDT---PFMNFRVVTGPNNSGKSTYLK 120
            ++SL+ R +E +     +++G++  L ++IR   +  L+A+ ESVALLDM+  F +LV LSP++  +CRP++   G  +I+ GRHP++   VQ+  FVPND    P  NF V+TGPN SGKSTYLK
Sbjct:  455 ISSLNSRTKECMNDIYQLSYGVINALMDEIR-PFVCHLYAMVESVALLDMLLSFTNLVALSPVDQPYCRPQMCPGGNFVIKKGRHPLIEQVVQDRPFVPNDVFLDPVTNFNVITGPNCSGKSTYLK 579          
BLAST of mRNA_H-paniculata_contig333.8918.1 vs. uniprot
Match: D2V0L7_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V0L7_NAEGR)

HSP 1 Score: 102 bits (254), Expect = 1.010e-22
Identity = 58/123 (47.15%), Postives = 82/123 (66.67%), Query Frame = 0
Query:    3 SLSERAREAVRSALLITHGIVQNLAEDIRVEGLDSLFAVAESVALLDMIFGFADLVTLSPLNFCRPKLTTEGPMIIRGGRHPIVGAVQECKFVPNDTPFM----NFRVVTGPNNSGKSTYLKQ 121
            SL+ R +E +    L+T  +V  L E IR   L  L+ ++ES+ LLDM++ FA LVTLS  N+ RP+  +EGP+ I+ GRHP++    + ++VPNDT FM    NF+++TG N SGKSTYLKQ
Sbjct:  428 SLNVRLKEIIDEIYLMTDLVVNRLVESIR-NHLSQLYKLSESIGLLDMLYSFATLVTLSN-NYVRPEFCSEGPIAIKQGRHPVMEKQLQGQYVPNDT-FMAESCNFQIITGANMSGKSTYLKQ 547          
BLAST of mRNA_H-paniculata_contig333.8918.1 vs. uniprot
Match: A0A0G4J8P1_PLABS (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J8P1_PLABS)

HSP 1 Score: 95.5 bits (236), Expect = 2.730e-20
Identity = 57/125 (45.60%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    3 SLSERAREAVRSALLITHGIVQNLAEDIRVEGLDSLFAVAESVALLDMIFGFADLVTLSPLNFCRPKLTTEGPMIIRGGRHPIVGAVQECKFVPNDTPFMN----FRVVTGPNNSGKSTYLKQAG 123
            SL +R +EA+   L++T   +Q L+  +R   L  L  V ES+ALLDMI  FA+LVT S  ++ RP LT +GP+ I  GRHP+    +   F  NDT ++N     ++VTGPN SGKSTYL+Q G
Sbjct:  514 SLDDRRKEALGDVLILTEHCLQELSASVR-RDLHWLLNVTESIALLDMIVSFANLVTQSD-SYVRPALTVDGPIAISKGRHPVKELERSRAFQTNDT-YLNETCRIQIVTGPNGSGKSTYLRQVG 635          
BLAST of mRNA_H-paniculata_contig333.8918.1 vs. uniprot
Match: A0A6G0WQU8_9STRA (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQU8_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.330e-19
Identity = 50/124 (40.32%), Postives = 80/124 (64.52%), Query Frame = 0
Query:    3 SLSERAREAVRSALLITHGIVQNLAEDIRVEGLDSLFAVAESVALLDMIFGFADLVTLSPLN--FCRPKLTTEGPMIIRGGRHPIVGAVQECK-FVPND---TPFMNFRVVTGPNNSGKSTYLK 120
            SL+ RA E ++    ++ G+VQ L +++R      L+++ E++A+LDMI  F +L  LSP +  +C P ++  G + I+ GRHP++  +   + FVPND   +P +NF +VTGPN SGKSTYL+
Sbjct:  316 SLNSRAFECLQDIYKLSFGVVQALLDEVRPHA-SVLYSMVENIAVLDMILSFTNLAALSPADQPYCCPTVSEHGQLFIKKGRHPLIEEMMSDQPFVPNDLYMSPVVNFNLVTGPNCSGKSTYLR 438          
BLAST of mRNA_H-paniculata_contig333.8918.1 vs. uniprot
Match: A0A2P6MVL9_9EUKA (MutS protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MVL9_9EUKA)

HSP 1 Score: 92.8 bits (229), Expect = 2.390e-19
Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = 0
Query:    6 ERAREAVRSALLITHGIVQNLAEDIRVEGLDSLFAVAESVALLDMIFGFADLVTLSPLNFCRPKLTTEGPMIIRGGRHPIVGAVQECKFVPNDT---PFMNFRVVTGPNNSGKSTYLKQ 121
            +R  +++   +++T  IV+ L+ DIR   L  ++   ++VA+LDM+  FA + T    N  RP+ +  GP++I+ GRHPI   +    FVPNDT      NF V+TGPN SGKSTY+KQ
Sbjct:  470 QRMNDSMNEIIMLTGRIVEELSHDIRTS-LGCIYKTIDAVAILDMLQSFA-IYTKGCTNAARPEFSDNGPLVIKQGRHPIAEKISPSSFVPNDTYVTDASNFHVITGPNMSGKSTYIKQ 586          
BLAST of mRNA_H-paniculata_contig333.8918.1 vs. uniprot
Match: A0A485LLE7_9STRA (Aste57867_22902 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLE7_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.530e-19
Identity = 49/126 (38.89%), Postives = 83/126 (65.87%), Query Frame = 0
Query:    1 VASLSERAREAVRSALLITHGIVQNLAEDIRVEGLDSLFAVAESVALLDMIFGFADLVTLSPLN--FCRPKLTTEGPMIIRGGRHPIV-GAVQECKFVPNDT---PFMNFRVVTGPNNSGKSTYLK 120
            ++SL+ RA E +R    +++G+VQ L  +IR      L+ + E++A LDM+  F++LV LSP++  +  P ++  G  I++ GRHP++   +++  F+PN++   P +NF +VTGPN SGKSTYL+
Sbjct:   61 ISSLNSRAGECLRDLYNLSYGVVQKLLNEIRPHAC-YLYGMVENIAHLDMLLSFSNLVALSPVDQPYSCPTVSKHGDFIVKQGRHPLIEDMMRDQPFIPNNSHLDPVVNFNIVTGPNCSGKSTYLR 185          
BLAST of mRNA_H-paniculata_contig333.8918.1 vs. uniprot
Match: A0A0H5QSZ2_9EUKA (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QSZ2_9EUKA)

HSP 1 Score: 91.7 bits (226), Expect = 6.080e-19
Identity = 56/125 (44.80%), Postives = 77/125 (61.60%), Query Frame = 0
Query:    3 SLSERAREAVRSALLITHGIVQNLAEDIRVEGLDSLFAVAESVALLDMIFGFADLVTLSPLNFCRPKLTTEGPMIIRGGRHPIVGAVQECKFVPNDTPFMN----FRVVTGPNNSGKSTYLKQAG 123
            SL +R  E++   LL+T   +Q L+  IR+  L  L  V ES+A+LD++  FA+LVT    ++ RP LT +GP+ I  GRHP+  A     F PND  ++N     +VVTGPN SGKSTYL+Q G
Sbjct:  520 SLDDRRTESLGDVLLLTERCLQELSSSIRMH-LPWLLNVTESIAVLDLLVNFANLVTQHD-SYIRPILTKDGPIAISKGRHPVKEAACAYGFTPNDI-YLNETSKLQVVTGPNGSGKSTYLRQTG 641          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig333.8918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJX0_ECTSI2.040e-5579.53MutS protein homolog 4 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JUC5_9PHAE2.350e-4859.88DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A836CNW6_9STRA1.020e-2955.56Muts protein 4 n=1 Tax=Tribonema minus TaxID=30337... [more]
T0S8L0_SAPDV2.160e-2344.44DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
D2V0L7_NAEGR1.010e-2247.15Predicted protein (Fragment) n=1 Tax=Naegleria gru... [more]
A0A0G4J8P1_PLABS2.730e-2045.60DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A6G0WQU8_9STRA2.330e-1940.32DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A2P6MVL9_9EUKA2.390e-1941.18MutS protein n=1 Tax=Planoprotostelium fungivorum ... [more]
A0A485LLE7_9STRA2.530e-1938.89Aste57867_22902 protein n=1 Tax=Aphanomyces stella... [more]
A0A0H5QSZ2_9EUKA6.080e-1944.80DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 65..124
e-value: 1.5E-15
score: 59.0
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 2..121
NoneNo IPR availablePANTHERPTHR11361:SF21MUTS PROTEIN HOMOLOG 4coord: 2..121
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 65..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig333contigH-paniculata_contig333:2374..4998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig333.8918.1mRNA_H-paniculata_contig333.8918.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig333 2374..4998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig333.8918.1 ID=prot_H-paniculata_contig333.8918.1|Name=mRNA_H-paniculata_contig333.8918.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp
VASLSERAREAVRSALLITHGIVQNLAEDIRVEGLDSLFAVAESVALLDM
IFGFADLVTLSPLNFCRPKLTTEGPMIIRGGRHPIVGAVQECKFVPNDTP
FMNFRVVTGPNNSGKSTYLKQAGERNTLGTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase