prot_H-paniculata_contig333.8917.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig333.8917.1
Unique Nameprot_H-paniculata_contig333.8917.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length85
Homology
BLAST of mRNA_H-paniculata_contig333.8917.1 vs. uniprot
Match: D8LJX0_ECTSI (MutS protein homolog 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX0_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 1.160e-30
Identity = 62/84 (73.81%), Postives = 72/84 (85.71%), Query Frame = 0
Query:    1 QECFAVRPDVDGMLDVSRKTFLQSMDDIFQTADTMSEECDYQVKVTFSASRGYHLVIPAGVETLPTGLVQAVQNVKTITCTTEE 84
            +ECFAVR DVDGMLDV+R TFLQSM+DI++ AD M+EE  YQVKV+ S SRGYHL+IPAGV+ LP GL+QAVQN KTI CTTEE
Sbjct:  361 EECFAVRADVDGMLDVARTTFLQSMEDIYRAADAMTEEHSYQVKVSCSVSRGYHLIIPAGVD-LPPGLIQAVQNTKTIACTTEE 443          
BLAST of mRNA_H-paniculata_contig333.8917.1 vs. uniprot
Match: A0A6H5JUC5_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC5_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.110e-23
Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 0
Query:   13 MLDVSRKTFLQSMDDIFQTADTMSEECDYQVKVTFSASRGYHLVIPAGVETLPTGLVQAVQNVKTITCTTEE 84
            MLDV+R TFLQSM+DI+Q AD M+EE  YQVKV+ S SRGYHL+IPAGV+ LP GL+QAVQN KTI CTTEE
Sbjct:    1 MLDVARTTFLQSMEDIYQAADAMTEEHGYQVKVSCSVSRGYHLIIPAGVD-LPPGLIQAVQNTKTIACTTEE 71          
BLAST of mRNA_H-paniculata_contig333.8917.1 vs. uniprot
Match: A0A482S255_9ARCH (MutS_IV domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S255_9ARCH)

HSP 1 Score: 90.5 bits (223), Expect = 3.740e-20
Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 0
Query:    1 QECFAVRPDVDGMLDVSRKTFLQSMDDIFQTADTMSEECDYQVKVTFSASRGYHLVIPAGV---ETLPTGLVQAVQNVKTITCTTEE 84
            +ECFA++P +DG+LDV+RKTFLQ+M++I   A+T S   +  VKV +S SRGY+LVIPA     ETLP   +QAV N ++I+CTT E
Sbjct:  135 EECFAIKPGIDGLLDVARKTFLQTMEEIHGMAETYSRHVELDVKVAYSTSRGYYLVIPATSSTSETLPDIFIQAVLNRRSISCTTYE 221          
BLAST of mRNA_H-paniculata_contig333.8917.1 vs. uniprot
Match: A0A836CNW6_9STRA (Muts protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNW6_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.290e-18
Identity = 45/85 (52.94%), Postives = 63/85 (74.12%), Query Frame = 0
Query:    1 QECFAVRPDVDGMLDVSRKTFLQSMDDIFQTADTMSEEC-DYQVKVTFSASRGYHLVIPAGVETLPTGLVQAVQNVKTITCTTEE 84
            QECFAV+PD++GMLDV+RKTFLQS++DI+  AD  ++E  +    V  +A+RGYHL +P  V  LP   +QAV++ K I+CTTE+
Sbjct:  426 QECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQ 510          
BLAST of mRNA_H-paniculata_contig333.8917.1 vs. uniprot
Match: A0A0P1B012_PLAHL (Dna mismatch repair protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B012_PLAHL)

HSP 1 Score: 78.6 bits (192), Expect = 4.020e-15
Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    1 QECFAVRPDVDGMLDVSRKTFLQSMDDIFQTADTMSEECDYQVKVTFSASRGYHLVIPAGVETLPTGLVQAVQNVKTITCTTE 83
            QECFAVR  VDGMLDV+R+T+L +++ I +   T  E   + +++ ++A RGYHL +P  ++ LP+  ++ V N   I C+T+
Sbjct:  390 QECFAVRAGVDGMLDVARRTYLDTIEKIHEVVHTYKENIGFPIRLNYTARRGYHLAVPVNIKELPSSFIERVTNRNVICCSTK 472          
BLAST of mRNA_H-paniculata_contig333.8917.1 vs. uniprot
Match: K0TKE2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TKE2_THAOC)

HSP 1 Score: 77.0 bits (188), Expect = 1.400e-14
Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    1 QECFAVRPDVDGMLDVSRKTFLQSMDDIFQTADTMSEECDYQVKVTFSASRGYHLVIPA---GVE-TLPTGLVQAVQNVKTITCTTEE 84
            QECFA++P+ DGM+DV RK FL ++DDI++ AD  +E  D  V+V  +++RGY+L I +   GV+  LP   +Q V+N K I CTTEE
Sbjct:  587 QECFALKPNTDGMMDVLRKAFLANVDDIYRLADEYAETYDMNVQVKETSARGYYLSISSADLGVDLALPDVFIQPVKNGKLIHCTTEE 674          
BLAST of mRNA_H-paniculata_contig333.8917.1 vs. uniprot
Match: B8BUC4_THAPS (DNA mismatch repair mutS protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUC4_THAPS)

HSP 1 Score: 74.3 bits (181), Expect = 1.220e-13
Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    1 QECFAVRPDVDGMLDVSRKTFLQSMDDIFQTADTMSEECDYQVKVTFSASRGYHLVIPA--GVETLPTGLVQAVQNVKTITCTTEE 84
            QECFA++P+ DGM+DV RK FL ++DDI++ AD  +E  D  V V  + +RGY+L + A  G++ LP   +Q V+N + I CTTEE
Sbjct:  249 QECFALKPNTDGMMDVLRKAFLANVDDIYRLADEYAEAYDITVSVKETTARGYYLSVSADLGLD-LPQIFIQPVKNGRFIHCTTEE 333          
BLAST of mRNA_H-paniculata_contig333.8917.1 vs. uniprot
Match: A0A8K1CR11_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR11_PYTOL)

HSP 1 Score: 73.9 bits (180), Expect = 1.690e-13
Identity = 34/84 (40.48%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    1 QECFAVRPDVDGMLDVSRKTFLQSMDDIFQTADTMSEECDYQVKVTFSASRGYHLVIPAGVETLPTGLVQAVQNVKTITCTTEE 84
            QECFAVR  +DGMLDV+R+T+L +++ I +         +  V++++S+ RGYHLV+P   + +P+ +V+ V   K I C+T+E
Sbjct:  389 QECFAVRAGIDGMLDVARRTYLDTIEKIHELVHKFKGSMEVPVRLSYSSRRGYHLVLPCNAKDIPSLIVERVPTKKAIYCSTKE 472          
BLAST of mRNA_H-paniculata_contig333.8917.1 vs. uniprot
Match: A0A7S2UIN1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIN1_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.040e-13
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    1 QECFAVRPDVDGMLDVSRKTFLQSMDDIFQTADTMSEECDYQVKVTFSASRGYHLVIPAGVET-LPTGLVQAVQNVKTITCTTEE 84
            QECFA++P+ DGM+DV RK FL ++DDI++ AD  +E     V V  + +RGY+L IP  + T +P   +Q V+  + I CTTEE
Sbjct:  254 QECFALKPNTDGMMDVLRKAFLANVDDIYKLADEYAETYGLPVSVKETTTRGYYLSIPTDMGTDMPDVFIQPVKRGRFIHCTTEE 338          
BLAST of mRNA_H-paniculata_contig333.8917.1 vs. uniprot
Match: A0A425CM83_9STRA (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CM83_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.280e-13
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    1 QECFAVRPDVDGMLDVSRKTFLQSMDDIFQTADTMSEECDYQVKVTFSASRGYHLVIPAGVETLPTGLVQAVQNVKTITCTTE 83
            QECFAVR  VDGMLDV+R+T+L +++ I +   T  E     +++T+++ RGYHL +P   + LP   ++ V     I C+T+
Sbjct:  261 QECFAVRAGVDGMLDVARRTYLDTIEKIHEVIHTYKENLGIPIRLTYTSRRGYHLAVPINTKDLPASFIERVSMKTVICCSTK 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig333.8917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJX0_ECTSI1.160e-3073.81MutS protein homolog 4 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JUC5_9PHAE1.110e-2373.61DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A482S255_9ARCH3.740e-2054.02MutS_IV domain-containing protein n=1 Tax=archaeon... [more]
A0A836CNW6_9STRA2.290e-1852.94Muts protein 4 n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A0P1B012_PLAHL4.020e-1540.96Dna mismatch repair protein n=1 Tax=Plasmopara hal... [more]
K0TKE2_THAOC1.400e-1448.86Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8BUC4_THAPS1.220e-1347.67DNA mismatch repair mutS protein (Fragment) n=1 Ta... [more]
A0A8K1CR11_PYTOL1.690e-1340.48Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2UIN1_9STRA3.040e-1345.88Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A425CM83_9STRA4.280e-1339.76DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036187DNA mismatch repair protein MutS, core domain superfamilySUPERFAMILY48334DNA repair protein MutS, domain IIIcoord: 1..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig333contigH-paniculata_contig333:570..1580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig333.8917.1mRNA_H-paniculata_contig333.8917.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig333 570..1582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig333.8917.1 ID=prot_H-paniculata_contig333.8917.1|Name=mRNA_H-paniculata_contig333.8917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp
QECFAVRPDVDGMLDVSRKTFLQSMDDIFQTADTMSEECDYQVKVTFSAS
RGYHLVIPAGVETLPTGLVQAVQNVKTITCTTEEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036187DNA_mismatch_repair_MutS_sf