prot_H-paniculata_contig33108.8888.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig33108.8888.1
Unique Name	prot_H-paniculata_contig33108.8888.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	60

Homology

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BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot
Match: A0A6H5K880_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K880_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 3.320e-23
Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0

Query:   10 QVAHTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTSGLDSFQAS 60
            +VA TIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPT+GLD+FQAS
Sbjct:  102 KVASTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTTGLDAFQAS 152

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BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot
Match: D8LKI7_ECTSI (White-brown-complex ABC transporter family (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI7_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.570e-21
Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 0

Query:   10 QVAHTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTSGLDSFQA 59
            +VA TIVGDEKTRGISGGEKKRLS+ CQLFGTPSLIFCDEPT+GLD+FQA
Sbjct:  156 KVASTIVGDEKTRGISGGEKKRLSMGCQLFGTPSLIFCDEPTTGLDAFQA 205

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BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot
Match: A0A8J4B572_9CHLO (ABC transporter domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B572_9CHLO)

HSP 1 Score: 89.0 bits (219), Expect = 3.140e-19
Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0

Query:   10 QVAHTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTSGLDSFQA 59
            +VA T VGDEKTRG+SGGEKKRLSI C+L G+PSLIFCDEPT+GLDSFQA
Sbjct:  203 KVADTRVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQA 252

[Close]

BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot
Match: A0A8J4DGJ1_9CHLO (ABC transporter domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4DGJ1_9CHLO)

HSP 1 Score: 87.0 bits (214), Expect = 7.950e-19
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query:   10 QVAHTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTSGLDSFQA 59
            + A T VGDEKTRG+SGGEKKRLSI C+L G+PSLIFCDEPT+GLDSFQA
Sbjct:  203 KAAATRVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQA 252

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BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot
Match: A0A8J4C8S2_9CHLO (ABC transporter domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C8S2_9CHLO)

HSP 1 Score: 87.0 bits (214), Expect = 1.430e-18
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query:   10 QVAHTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTSGLDSFQA 59
            + A T VGDEKTRG+SGGEKKRLSI C+L G+PSLIFCDEPT+GLDSFQA
Sbjct:   96 KAAATRVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQA 145

[Close]

BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot
Match: A0A8J4C3V9_9CHLO (ABC transporter domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C3V9_9CHLO)

HSP 1 Score: 87.0 bits (214), Expect = 1.490e-18
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query:   10 QVAHTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTSGLDSFQA 59
            + A T VGDEKTRG+SGGEKKRLSI C+L G+PSLIFCDEPT+GLDSFQA
Sbjct:  203 KAAATRVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQA 252

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BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot
Match: A0A835WFU1_9CHLO (ABC transporter domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WFU1_9CHLO)

HSP 1 Score: 86.7 bits (213), Expect = 2.040e-18
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0

Query:   14 TIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTSGLDSFQA 59
            T VGDEKTRG+SGGEKKRLSI C+L G+PSLIFCDEPT+GLDSFQA
Sbjct:  205 TCVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQA 250

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BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot
Match: A0A2K3D6G1_CHLRE (ABC transporter domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D6G1_CHLRE)

HSP 1 Score: 86.7 bits (213), Expect = 2.040e-18
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0

Query:   14 TIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTSGLDSFQA 59
            T VGDEKTRG+SGGEKKRLSI C+L G+PSLIFCDEPT+GLDSFQA
Sbjct:  205 TCVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQA 250

[Close]

BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot
Match: A0A7S0WCZ7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WCZ7_9CRYP)

HSP 1 Score: 84.0 bits (206), Expect = 2.490e-18
Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = 0

Query:    8 SLQ-VAHTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTSGLDSFQA 59
            SLQ  AHTIVG  K RGISGGEKKRLSIAC+L G+P L+F DEPTSGLDSFQA
Sbjct:   34 SLQKAAHTIVGGGKVRGISGGEKKRLSIACELLGSPELLFLDEPTSGLDSFQA 86

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BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot
Match: A0A7R9U5Z0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5Z0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 7.090e-18
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 0

Query:    9 LQVAHTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEPTSGLDSFQA 59
            L  A T VGDEKTRGISGGEKKRLSIAC+L   P+++FCDEPTSGLDSFQA
Sbjct:  166 LPSADTPVGDEKTRGISGGEKKRLSIACELLSDPNVLFCDEPTSGLDSFQA 216

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig33108.8888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K880_9PHAE	3.320e-23	92.16	ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D8LKI7_ECTSI	1.570e-21	88.00	White-brown-complex ABC transporter family (Partia...	[more]
A0A8J4B572_9CHLO	3.140e-19	82.00	ABC transporter domain-containing protein n=1 Tax=...	[more]
A0A8J4DGJ1_9CHLO	7.950e-19	80.00	ABC transporter domain-containing protein n=1 Tax=...	[more]
A0A8J4C8S2_9CHLO	1.430e-18	80.00	ABC transporter domain-containing protein n=1 Tax=...	[more]
A0A8J4C3V9_9CHLO	1.490e-18	80.00	ABC transporter domain-containing protein n=2 Tax=...	[more]
A0A835WFU1_9CHLO	2.040e-18	84.78	ABC transporter domain-containing protein n=1 Tax=...	[more]
A0A2K3D6G1_CHLRE	2.040e-18	84.78	ABC transporter domain-containing protein n=3 Tax=...	[more]
A0A7S0WCZ7_9CRYP	2.490e-18	79.25	Hypothetical protein (Fragment) n=1 Tax=Hemiselmis...	[more]
A0A7R9U5Z0_9STRA	7.090e-18	78.43	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 5..60 e-value: 1.1E-12 score: 49.8
None	No IPR available	PANTHER	PTHR19241	ATP-BINDING CASSETTE TRANSPORTER	coord: 12..59
None	No IPR available	PANTHER	PTHR19241:SF606		coord: 12..59
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..60
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..12
IPR003439	ABC transporter-like	PFAM	PF00005	ABC_tran	coord: 12..52 e-value: 2.4E-7 score: 31.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..57

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig33108	contig	H-paniculata_contig33108:249..428 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig33108.8888.1	mRNA_H-paniculata_contig33108.8888.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig33108 249..428 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig33108.8888.1 ID=prot_H-paniculata_contig33108.8888.1|Name=mRNA_H-paniculata_contig33108.8888.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
MRCFLFHSLQVAHTIVGDEKTRGISGGEKKRLSIACQLFGTPSLIFCDEP
TSGLDSFQAS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003439	ABC_transporter-like
IPR027417	P-loop_NTPase