prot_H-paniculata_contig3307.8875.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3307.8875.1
Unique Nameprot_H-paniculata_contig3307.8875.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length582
Homology
BLAST of mRNA_H-paniculata_contig3307.8875.1 vs. uniprot
Match: D8LBB1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBB1_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 7.950e-83
Identity = 212/529 (40.08%), Postives = 278/529 (52.55%), Query Frame = 0
Query:   99 DAEEEAWVKSMVDQGTDCSVVQGADSRAWDYVLEMAIQEHESSGGI-VTTPVQEVAGAAALEFVGRWLGGNLPHSGPALQTLRHISS--------VATAAGGSQDGGSSKGIVGRTMADAVSRPSALAMVSCSTGQRLPRVVLFSLNANSGAALAAEIVQPEAAGLVASLPRLLDNSNSRSSTRAESDRPIRPISWPDEMASR--DSDKPRYSEGRM--------GSGHRGVVFESLDSRILEGALASAMGRVGLGIECRSRSGMWRLPTGAQLTNVPDLTIINGAVQPLLEEDAAGIARASLPRGAQDCSMAESLVRGLIRRNGGAGIRRGGHLVSWCLSFDSGLAGALHV-----------PGVPPVAAEXXXXXXXXXXXXXXXXXXREDATAIVLYLLLDPISXXXXKRAGNNSLSWPSLRVGSSACSRSASAXXXXXXXXXXXXXXSS---------------RAFVLDDNSPFVALFQELGL-ERVCDADWLRFIPDADSDSSVVDRNGAARVRPIGFLVTRP 581
            D ++E WV+S+++QGT  SV++G +S AWDYVL+M ++E E  G   V +PVQE+ G AA EFV RWL  NLP + PAL  L+ I          + + +G  Q+    +G  GR +AD+V+ PS++A+VSCS  Q + RV LFSL+ANSGAALAA +VQP A GL+  +P                  P+   +  +E  +R  +S+  R S G +        G   RGVVFESLDSRILE AL S M R+GLG++ RSRSGMW+L  GA L    D +I +  V+P+  ED   IAR     G  +   +E+LVRGLI RN  AGIRRG  LV+WCLSFD+GLAGAL++           P +PP+A+                   R    A++  LL  P       RA NN+   P+ R    A +RS S               SS                A V+DD+SPFV LF EL L ERVCDADW+RF P     S            P+  LV  P
Sbjct:   66 DEQDEEWVRSLMEQGTVGSVIEGMESPAWDYVLQMVVEERERGGAATVESPVQEITGVAATEFVSRWLRSNLPITLPALNALKLIEGGCAQQHQRIGSRSGDGQEQRRVRG--GRALADSVAEPSSVAVVSCSPEQGMHRVNLFSLSANSGAALAAAVVQPGAVGLL--VP------------------PVGAAALGEETVARGYNSNDTRGSSGEVSGRRSTGPGCSDRGVVFESLDSRILEDALVSTMRRLGLGLKKRSRSGMWKLRPGAVLP-AGDTSITSAEVRPVTLEDVGLIARCC-SSGLGEVGRSEALVRGLIGRNPSAGIRRGSQLVAWCLSFDNGLAGALYIAPQTTESGLPLPILPPLAS---------GGQEEGQFSPRNMVLALLGSLLARP---PGTDRAANNT---PTARTDDEA-TRSVSDAASSTEEKQVGLSGSSLAHGRGAGGGVSVGLEAVVVDDDSPFVGLFGELELLERVCDADWVRFEPLTSCSSGASGAPAVVAPVPLSALVLNP 554          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3307.8875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBB1_ECTSI7.950e-8340.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3307contigH-paniculata_contig3307:1437..13619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3307.8875.1mRNA_H-paniculata_contig3307.8875.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3307 1361..14095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3307.8875.1 ID=prot_H-paniculata_contig3307.8875.1|Name=mRNA_H-paniculata_contig3307.8875.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=582bp
MPQDSNLLPQTLNVDNPLSPATLRQAKRCKHHHTAPSQPSPDDMNVEDRE
ALPANSDSSDWEDWADAMEGQDEPARDAAEEAEKNTVEGASDGCRGGPDA
EEEAWVKSMVDQGTDCSVVQGADSRAWDYVLEMAIQEHESSGGIVTTPVQ
EVAGAAALEFVGRWLGGNLPHSGPALQTLRHISSVATAAGGSQDGGSSKG
IVGRTMADAVSRPSALAMVSCSTGQRLPRVVLFSLNANSGAALAAEIVQP
EAAGLVASLPRLLDNSNSRSSTRAESDRPIRPISWPDEMASRDSDKPRYS
EGRMGSGHRGVVFESLDSRILEGALASAMGRVGLGIECRSRSGMWRLPTG
AQLTNVPDLTIINGAVQPLLEEDAAGIARASLPRGAQDCSMAESLVRGLI
RRNGGAGIRRGGHLVSWCLSFDSGLAGALHVPGVPPVAAEAAAAAAAAGV
AEYSATTAREDATAIVLYLLLDPISQQQQKRAGNNSLSWPSLRVGSSACS
RSASAANSSNSSCSSSGNSSSRAFVLDDNSPFVALFQELGLERVCDADWL
RFIPDADSDSSVVDRNGAARVRPIGFLVTRP*
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