prot_H-paniculata_contig32812.8804.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32812.8804.1
Unique Nameprot_H-paniculata_contig32812.8804.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length183
Homology
BLAST of mRNA_H-paniculata_contig32812.8804.1 vs. uniprot
Match: A0A6H5JBB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB0_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.640e-29
Identity = 63/104 (60.58%), Postives = 78/104 (75.00%), Query Frame = 0
Query:    1 MCALAPILAWGSNLVMIEHPSARSKRRRSSVSLLLSAPAMFFWGIGTSNVG-TDSLGWEPSQSSAALAVATIVVPAVDAFFASHAVERWLDKMSCQHWQFSRQA 103
            M A+AP L+W + LV  E P +  KRR S VSL LSAPAMFFWG+GTS VG T  +GW  S ++AALAVATI++PA+DAFF S  VE+W DK SCQ W+FS++A
Sbjct:  511 MSAIAPGLSWAAGLVAREKPGSTEKRR-SLVSLFLSAPAMFFWGLGTSTVGMTHGMGWNDSATAAALAVATIIIPAMDAFFNSRKVEQWYDKWSCQRWRFSQRA 613          
BLAST of mRNA_H-paniculata_contig32812.8804.1 vs. uniprot
Match: D7FN08_ECTSI (Kinase, NEK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN08_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 2.280e-14
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0
Query:    1 MCALAPILAWGSNLVMIEHPSARS--KRRRSSVSLLLSAPAMFFWGIGTSNVGTDSLGWEPSQSSAALAVATIVVPAVDAFFASHAVERWLDK 91
            MCALAP++   +   + +  S  +  K R + +S+LL APAMFFWG+GTS VG  +LGW  S S+ ++A AT+ +PAVD+FF S       DK
Sbjct:  483 MCALAPLVKLATTGSVDDSDSKHTGVKARSNKLSVLLGAPAMFFWGVGTSTVGQTALGWSSSLSATSMAAATLAIPAVDSFFNSRKASAIGDK 575          
BLAST of mRNA_H-paniculata_contig32812.8804.1 vs. uniprot
Match: A0A6H5KM21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM21_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.460e-13
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 0
Query:    1 MCALAPILAWGSNLVMIEHPSARSKR-RRSSVSLLLSAPAMFFWGIGTSNVGTDSLGWEPSQSSAALAVATIVVPAVDAFF 80
            +C +AP  +WG  + +   P   + R R+++    L+ PAMFFWG+GTS +  +S  W  S S+AALAVATIV+PA+D +F
Sbjct:  405 LCFIAPFWSWGVAMSVKRDPEITNTRARQTAAKYFLAIPAMFFWGVGTSKIAPNSFNWAESASAAALAVATIVIPALDTYF 485          
BLAST of mRNA_H-paniculata_contig32812.8804.1 vs. uniprot
Match: D7FWX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX2_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 7.300e-12
Identity = 34/80 (42.50%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    1 MCALAPILAWGSNLVMIEHPSARSKRRRSSVSLLLSAPAMFFWGIGTSNVGTDSLGWEPSQSSAALAVATIVVPAVDAFF 80
            +C +AP  +WG+ + +   P   + R         ++PAMFFWG+GTS +  +S  W  S S+AALAVATIV+PA+D +F
Sbjct:  287 LCFIAPFWSWGAAMSVKRDPETTNTR---------ASPAMFFWGVGTSKIAPNSFNWAESASAAALAVATIVIPALDTYF 357          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32812.8804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JBB0_9PHAE1.640e-2960.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN08_ECTSI2.280e-1445.16Kinase, NEK n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KM21_9PHAE1.460e-1344.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWX2_ECTSI7.300e-1242.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..82
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..51
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 31..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32812contigH-paniculata_contig32812:341..1922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32812.8804.1mRNA_H-paniculata_contig32812.8804.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32812 63..2502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32812.8804.1 ID=prot_H-paniculata_contig32812.8804.1|Name=mRNA_H-paniculata_contig32812.8804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=183bp
MCALAPILAWGSNLVMIEHPSARSKRRRSSVSLLLSAPAMFFWGIGTSNV
GTDSLGWEPSQSSAALAVATIVVPAVDAFFASHAVERWLDKMSCQHWQFS
RQARNGTDQIRDGVDVMNVILELPARLPLLARNRPPRGTVLVSSVHELPR
ALSILPSGKNSCRLLRCDFASSAPSKRRRRWR*
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