prot_H-paniculata_contig324.8722.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig324.8722.1
Unique Nameprot_H-paniculata_contig324.8722.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length78
Homology
[Close]
BLAST of mRNA_H-paniculata_contig324.8722.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 2.510e-16
Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 0 
Query:    1 VKDSLHPRGTVAIMVPHPWHLHAGRIHSALTHASVGLHVEDHPLLLQYKGMRAGRTSQNAVNHLRYNADMVMLAHND 77
            V+  +HP GT+A++VPHPW  H  R+  A+  A VGL VEDHPL+L Y     GR    A NHL+ + DMV+L HN+
Sbjct:  384 VRGRMHPDGTIALVVPHPWSAHFHRLQEAVRDACVGLVVEDHPLMLNYSKRVGGRPPIRAENHLKNHLDMVLLIHNE 460
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig324.8722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBJ9_9PHAE2.510e-1649.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig324contigH-paniculata_contig324:39170..39746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig324.8722.1mRNA_H-paniculata_contig324.8722.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig324 39170..39747 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig324.8722.1 ID=prot_H-paniculata_contig324.8722.1|Name=mRNA_H-paniculata_contig324.8722.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp
VKDSLHPRGTVAIMVPHPWHLHAGRIHSALTHASVGLHVEDHPLLLQYKG
MRAGRTSQNAVNHLRYNADMVMLAHNDP
back to top