prot_H-paniculata_contig32236.8683.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32236.8683.1
Unique Nameprot_H-paniculata_contig32236.8683.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length95
Homology
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BLAST of mRNA_H-paniculata_contig32236.8683.1 vs. uniprot
Match: D8LF96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF96_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 8.530e-30
Identity = 64/90 (71.11%), Postives = 75/90 (83.33%), Query Frame = 0 
Query:    6 ALFTQAQIDRVVDDLKETIREKNREMKRYVSDTERSSIDRALVEVGTYAKVFISRATGGDTGLHIAVTLGSLRAAQVMELVTRISQLEDD 95
            A+FTQ Q+DRVVDDLK   RE N + KR+VSD+E  +ID+ L E GTYA V +SRATGGDTGLHIA+TLGSLRAAQVMELV RI+QLE+D
Sbjct:  107 AIFTQEQMDRVVDDLKLRTRETNAKTKRFVSDSEWLTIDQTLGETGTYASVLMSRATGGDTGLHIAITLGSLRAAQVMELVLRIAQLEED 196
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BLAST of mRNA_H-paniculata_contig32236.8683.1 vs. uniprot
Match: A0A6H5L644_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L644_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.580e-22
Identity = 57/91 (62.64%), Postives = 69/91 (75.82%), Query Frame = 0 
Query:    6 ALFTQAQIDRVVDDLKETIREKNREMKRYVSDTERSSIDRALVEVGTYAKVFISRATGGDTGLHIAVTLGSLRAAQV-MELVTRISQLEDD 95
            A+FTQ Q+DRVVDDLK   RE N + KR+VSD+E  +ID+ L E GTYA V +SRAT GDTGLHIA+TLGSLRAAQV +E    ++ L DD
Sbjct:  110 AIFTQEQMDRVVDDLKLRTRETNAKTKRFVSDSEWLTIDQTLGETGTYASVLMSRATSGDTGLHIAITLGSLRAAQVFVEEGCDVTILNDD 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32236.8683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF96_ECTSI8.530e-3071.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L644_9PHAE1.580e-2262.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32236contigH-paniculata_contig32236:847..2447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32236.8683.1mRNA_H-paniculata_contig32236.8683.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32236 847..2447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32236.8683.1 ID=prot_H-paniculata_contig32236.8683.1|Name=mRNA_H-paniculata_contig32236.8683.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp
MQYPQALFTQAQIDRVVDDLKETIREKNREMKRYVSDTERSSIDRALVEV
GTYAKVFISRATGGDTGLHIAVTLGSLRAAQVMELVTRISQLEDD
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