prot_H-paniculata_contig3211.8644.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3211.8644.1
Unique Nameprot_H-paniculata_contig3211.8644.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length547
Homology
BLAST of mRNA_H-paniculata_contig3211.8644.1 vs. uniprot
Match: D7FS85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS85_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 7.200e-31
Identity = 107/181 (59.12%), Postives = 120/181 (66.30%), Query Frame = 0
Query:  189 VVAAGSGVGTDG-ARLADLCREDKAKVARLMQDLVKLRGEKDGFDARLARLRGQNEDIVKEMASLKVKFGQSMQLLRKYQSIVQEGEAAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXX------ADIRLLREALHAAEESAQRAEKEAAEERARRVMVDAELWNVKRDAEGLRRQFQTH 362
            V AA  GV  DG ARLA+LC+EDK KVARLMQDLVKLR EK+G   R  RLR QNE IVK+MA LK KFGQSMQLLRKYQSIVQEG AA  G         XXXXXX     XXXXXXXX      A+I+ LRE L  AEES ++AE EAA +R+ R  +  EL   +  A+ LRRQ   H
Sbjct:  223 VAAAAGGVAVDGGARLAELCKEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKQMAGLKDKFGQSMQLLRKYQSIVQEGGAADEGGGVGVRGKGXXXXXXKRLEKXXXXXXXXXXXXXXAEIQALRETLRLAEESTRKAEAEAAAQRSGRTAMAEELRQARGQADELRRQLDHH 403          
BLAST of mRNA_H-paniculata_contig3211.8644.1 vs. uniprot
Match: A0A6H5K9R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R0_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 3.380e-30
Identity = 100/177 (56.50%), Postives = 112/177 (63.28%), Query Frame = 0
Query:  189 VVAAGSGVGTDG-ARLADLCREDKAKVARLMQDLVKLRGEKDGFDARLARLRGQNEDIVKEMASLKVKFGQSMQLLRKYQSIVQEGEAAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-DIRLLREALHAAE-ESAQRAEKEAAEERARRVMVDAELWNVKRDAEGLRRQFQTH 362
            V AA  GV  DG ARLA+LC+EDK KVARLMQDLVKLR EK+G   R  RLR QNE IVKEMA LKVKFGQSMQLLRKYQSIVQEG A  GGXX      XXXX                A +I+ LRE   A   ESA++AE EAA +R+ R  +  EL   +  A+ LRRQ   H
Sbjct:  312 VAAAAGGVAIDGGARLAELCQEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKEMAGLKVKFGQSMQLLRKYQSIVQEGGAPGGGXXVGVRGKXXXXGACKRLEKQEAAATAAAAEIQALREXPSAKRRESARKAEAEAAVQRSDRTAMAEELRQARGQADELRRQLDHH 488          
BLAST of mRNA_H-paniculata_contig3211.8644.1 vs. uniprot
Match: A0A7S2SSJ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSJ5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.720e-8
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 0
Query:  193 GSGVGTDG------ARLADLCREDKAKVARLMQDLVKLRGEKDG-----------FDARLARLRGQNEDIVKEMASLKVKFGQSMQLLRKYQ 267
            GSG   DG      ARL DLC  DK++VARL+  L+++  E D            F++R+ RLR QN++IV EMA+L+ KFGQ++ L ++YQ
Sbjct:   42 GSGGAVDGRAKTKTARLTDLCAADKSRVARLIDQLLRVTTEHDKAVEDWGRERATFESRIQRLRKQNDEIVGEMAALRKKFGQTLTLAQQYQ 133          
BLAST of mRNA_H-paniculata_contig3211.8644.1 vs. uniprot
Match: A0A835Z7B7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B7_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.630e-6
Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = 0
Query:  201 ARLADLCREDKAKVARLMQDLVKLRGEKDGFDARLARLRGQNEDIVKEMASLKVKFGQSMQLLRKYQS 268
            ARL DLC  DKAKVA+LMQ+L   + E      RL RLR QN +IV E A  + +  Q++ LL+KYQ+
Sbjct:   44 ARLVDLCPSDKAKVAKLMQELSAAQAEAAARAHRLERLRAQNAEIVAETADTRSRLTQAVLLLKKYQA 111          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3211.8644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FS85_ECTSI7.200e-3159.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9R0_9PHAE3.380e-3056.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SSJ5_9STRA4.720e-843.48Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835Z7B7_9STRA1.630e-650.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..145
NoneNo IPR availableCOILSCoilCoilcoord: 235..255
NoneNo IPR availableCOILSCoilCoilcoord: 310..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3211contigH-paniculata_contig3211:11883..14938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3211.8644.1mRNA_H-paniculata_contig3211.8644.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3211 11883..15801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3211.8644.1 ID=prot_H-paniculata_contig3211.8644.1|Name=mRNA_H-paniculata_contig3211.8644.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=547bp
MTGSTAREDIAFARWETLGPPTLPANPITTNTASTATVDNEEIHVLRAAP
GAGAGPPYVLGRVPLAPSPQPSPFVSKKDDIYTTVSEKRAPPSTATLPAV
FPSTAEAPGAFRVTSLGSGVYDRGVASADSELERLAGQAEQAAAAREGPA
PRQDPKKVAKGGGSNTTLAGGSSGFATGSGTIHERDESVVAAGSGVGTDG
ARLADLCREDKAKVARLMQDLVKLRGEKDGFDARLARLRGQNEDIVKEMA
SLKVKFGQSMQLLRKYQSIVQEGEAAAGGGLATPSGATAASSNSAATAAA
AAETAAAADIRLLREALHAAEESAQRAEKEAAEERARRVMVDAELWNVKR
DAEGLRRQFQTHINSSGGKTVSECSQEGAATASDGLLRATSVPAPAPSVA
PLPPTLRHYPEPQSSPARDNHHETAESGVRAPIIAQPAPAFTNYPAVIPA
ASGASSTAGTGTRLGDRRADSTPEVLHTDSILATGRKEALPAVAVVGIGS
SKVSSGENRRLSLGSDEEQIGVSSSGGFSDTQDGKGLPRRTEVEEAG
back to top