prot_H-paniculata_contig321.8640.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig321.8640.1
Unique Nameprot_H-paniculata_contig321.8640.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1714
Homology
BLAST of mRNA_H-paniculata_contig321.8640.1 vs. uniprot
Match: D8LMQ4_ECTSI (Nucleotide binding protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ4_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 7.200e-55
Identity = 182/495 (36.77%), Postives = 220/495 (44.44%), Query Frame = 0
Query:  306 PIPT-LWRVSEQWKGHKARVTSLWPAVCRA----------STSSGEGDNMLFDALPSH-----TAALDTSRLRTCCHGNSNRHG-FNGDLVSAAADGTVGWWAW----------------PRDHCCGSSSAARKEQ--RTPPVRILCRAGPAATITSFVIDDTHGRIISC---------------------SERRNNDRLSSPSNPRTATGQDMGDRTYHEWNAAG-ASVFCGDTKGNIYCFLNPIEEHNDADGTSMESPTHGGKDGRRETDLE--IKPRA-AEAIAPCLVLRRQHGKDQISRLALMGDCLLSAGHDGHVNHYLVSYHSHDTTDEAPTDPLPR-----------LVLTLVTSYPTSPVNVISDLWVGGYCNGGGYRPD--CSGGRQSKDSSPQRTSRDALRIVVAGRSGSKFMSVWDVTEGRQLLELECGDRHLAQALLLSWPSALSARSRTPVVPGDSFSSGRPRIHTSFRSRGCRGAAVTLLP 727
            P PT  WRV   W+GH++RVT++W AV  A          ST  G                  TAALDTSRLRT    +S   G F+G LVSA ADGTV WW W                 R+H  G S         R P +R++C+A P A +TS  IDD                              ER        P+ P       +G     E  AA  A VFCGDTKGNI CFL   +E ++       SP  G   G  E   E  ++PRA  + +APCLVL+RQHGKDQISR+AL G CL SAGHDG VNHY++SY     +   P  P              +                 D ++    +GGG   D     G+  + +         +R+ VAGRSGS  MSVWD+TEGRQLLELECGDRHLAQ L LSWP     RS T          G P     FR R    +A T  P
Sbjct:  910 PFPTGPWRVGAAWRGHRSRVTAIW-AVGDADHDGGGSRSPSTPLGXXXXXXXXXXXXRCQFFFTAALDTSRLRT----SSGAGGIFSGALVSAGADGTVAWWEWGGEGGRADEAGRSGVDEREHAAGGSEPRSGGMGIRPPKLRMVCQAEPGAAVTSVAIDDRXXXXXXXXXXXXXXXXXXXXXXXXXXDREERVVGKAELEPNTPDDDARGKVGRTPPAEVAAAARAVVFCGDTKGNIRCFLEEDKEEDEP------SPCVGLDGGGGEAAYERGVEPRALGQGVAPCLVLKRQHGKDQISRMALWGGCLFSAGHDGQVNHYVISYSYPLPSSPDPVSPSSERRRGTASGGCGVAXXXXXXXXXXXXXXXXDAFLEIQGDGGGSCGDGVAHNGKGDRGARSVAGVGGGVRLAVAGRSGSSRMSVWDITEGRQLLELECGDRHLAQDLFLSWP-----RSAT----------GFPGSAAPFRRRADHVSATTAAP 1378          
BLAST of mRNA_H-paniculata_contig321.8640.1 vs. uniprot
Match: A0A6H5KGL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL5_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 5.270e-32
Identity = 174/614 (28.34%), Postives = 220/614 (35.83%), Query Frame = 0
Query:  311 WRVSEQWKGHKARVTSLWPAVCRA--------STSS-----GEGDNMLFDALPSHTAALDTSRLRTC---CHGNSNRHGFNGDLVSAAADGTVGWWAW----------------PRDHCCGSSSAARKEQ--RTPPVRILCRAGPAATITSFVIDDTHGRIISCSERRNNDRLSSPSNPRTATGQDMGDRTYHEWN--------------------AAGASVFCGDTKGNIYCFLNPIEEHNDADGTSMESPTHGGKDGRR------ETDLE--IKPRA-AEAIAPCLVLRRQHGKDQIS------------------------RLALMGDCLLSAGHDGHVNHYLVSYHSHDTTDEAPTD--------------------------------------------------------------------------------------------PLPRLVLTLVTSYPTSPVNVISDLWV----GGYCNGGGYRPDCSGGRQSKDSSPQRTSRDALRIVVAGRSGSKFMSVWDVTEGRQLLE--------------LECGDRHLAQALLLSWPSALSARSRTPVVPGDSFSSGRPRIHTSFRSRGCRGAAVTLLP 727
            WRV   W+GH++RVT++W AV  A        STS+     G G           TAALDTSRL T                 LVS  +DGTV WW W                 R+H  G S         R P +R++CRA P A +TS  IDD   ++  C  R     L   ++ R    + +G +   E N                    AA A VFCGDTKGNI CFL    E           P  G   G        E  LE   +P A  + +APCLVL+RQHGKDQ++                        R A  G C ++A     V     S    D  D+A  +                                                                                                ++L++VT+Y T+PV  +SDLWV    GG C G G   +  GGR ++  +        +R+ VAGRSGS  MSVWD+ EGRQLLE              LECGDR+LAQ L L WP     RS T          G P     FR R    +A T +P
Sbjct:  905 WRVGAAWRGHRSRVTAIW-AVGDADHDSGGSRSTSTPIGREGAGXXXXGRCQGFFTAALDTSRLHTSPXXXXXXXXXXXXXXXLVSVGSDGTVAWWEWGGEGGRADEAGRSEVDEREHAAGGSEPRSGGMGIRPPKLRMVCRAEPGAAVTSVAIDDRRRQL--CRRRPRPSSLRKKNSSRRGRDESVGGKAKLEPNTSDNDARGKIGKTPPAEVAAAARAVVFCGDTKGNIRCFL----EEXXXXXXXQPLPCVGLDGGXXXXXXXGEAALERGAEPSALGQGVAPCLVLKRQHGKDQVNHYFISYCYPLPSSPDPVSPSSERRRCAASGGCGVAASSTPPV-----SAVGTDDGDDASLEIQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHFIDSCXXXXXXXXXXXXXXXXXXXVMLSIVTTYATAPVTSVSDLWVTSDGGGSC-GDGVARNGQGGRGARIGAGVG---GGVRLAVAGRSGSSRMSVWDIAEGRQLLEVWRVVQVKIVGGFELECGDRNLAQDLFLVWP-----RSAT----------GFPGSDAPFRRRADHVSATTAVP 1487          
BLAST of mRNA_H-paniculata_contig321.8640.1 vs. uniprot
Match: D7FVQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ9_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 3.530e-21
Identity = 76/171 (44.44%), Postives = 89/171 (52.05%), Query Frame = 0
Query: 1221 GGRPVLCVVHTRLTTIQLPRTSKPPPTSELKTYLSAVAADLVVTGDTGGTVTVWQLVAAARDSSVVHDGSITAGGEEHRSRGCGQKAHAEVVDGFVYRGPAGRRRGAA-----EGAEGENGACLVPLLEYRAHQSGVFCAAVQVAAVGER--LLIVTGGDDQAVCVAEVEV 1384
            G RPVLC+ H R+          P  T + +  +     DL+ TGDTGGTVTVWQ                +  GE                  FVYRGPAGRRRG A     EGA       LVP+LEYRAHQ GV C AV V A GER  +++VTGGDDQA+CVAE+EV
Sbjct:    4 GKRPVLCLAHARVW---------PSATHQQQHEV----LDLIATGDTGGTVTVWQFYGXXXXXXXXXSTLPSDHGE------------------FVYRGPAGRRRGGAARTGPEGAAAPPCHALVPVLEYRAHQMGVLCMAVHVPA-GERGRVVVVTGGDDQAICVAELEV 142          
BLAST of mRNA_H-paniculata_contig321.8640.1 vs. uniprot
Match: A0A6H5KMH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH9_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.410e-10
Identity = 110/463 (23.76%), Postives = 153/463 (33.05%), Query Frame = 0
Query: 1351 GVFCAAVQVAAVGE--RLLIVTGGDDQAVCVAEVEVLWPEDIFDSSDSDKDSRNAGVEPKFRSGGC--------DRLVTARLIEAAPEIIKEASGSAIKGIALLP---------PIRQARPADTASTT--SPSAAAATAXXXXXXXXSPRAPDTTLGADERSAGIPRSTTMQGSAQLVATIFTLSRDQRLSRWELSEHPQPSGDEQLAVGSGDFYPCRGNFEKTFLKSRGGRGKLEQRVSEMGTSRVEVEVNVQKCLGQGQERFVGANTISSAAHH--------------------------------------------GDGWSNKILQRRHRWQLLWKAGCVTDVCDVSSMDVIIL----PVHEQHGWTDSDQAGTATGI------------------SPTAQHSIVENL-RTPDHGGQAVANRDVYLQS----------------ALVAVAGQGLQLVLF 1709
            GV C AV V A GE  R++IVTGGDDQA+CVAE+EV+   D    S + + + + G      S G         +R    RL+  +P++ + A+GSAIKG+ LLP         P R   P+  + TT  SP+ +A            P +          +  +              ++FT++RDQRLSRW+L +                                                                                                                           G     +      RW+L W+AGCVTDVCDVS +DV  L    P H QH   ++   G +                     SP  +H  V  L R    GG+   N    + S                A+VAV+GQGLQLV+F
Sbjct:    2 GVLCMAVHVPA-GEAGRVVIVTGGDDQAICVAELEVVVVLDDGRCSPTTRIASDRGPSSSQGSRGQGGGEVPARERRSAVRLVAGSPQVFEGAAGSAIKGMQLLPVDPPSXXXXPFRLPGPSTESPTTMQSPTPSAGIHDDDAAVAPPPSSRSANFSFSSTTPAVEPGVGAGAGPPCSLSLFTVARDQRLSRWDLVKDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASRQGQKGAAERRWRLRWRAGCVTDVCDVSGLDVAPLSPREPQHRQHAAGEATLGGRSXXXXXXXXXXXXXXXSGDRASSPCHRHRTVARLLRKEGEGGETAENACGGVPSSEAEDWTRGEAFGAPAAIVAVSGQGLQLVVF 463          
BLAST of mRNA_H-paniculata_contig321.8640.1 vs. uniprot
Match: A0A8K1FIC8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIC8_PYTOL)

HSP 1 Score: 62.4 bits (150), Expect = 9.480e-6
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    6 TMRGHSGSHVWRLAVHENNGHQMSLMATGGNDGAIKLWDLAYE-AARQEASRSGKI 60
            TM+GH G HVWR+AVH      M L+ATGG DGA+KLWD+  + A+  E+S SG +
Sbjct:  301 TMQGHQGKHVWRVAVHP----AMPLIATGGGDGAVKLWDVEQQTASAHESSLSGPL 352          
BLAST of mRNA_H-paniculata_contig321.8640.1 vs. uniprot
Match: A0A662WW86_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW86_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.860e-5
Identity = 32/75 (42.67%), Postives = 40/75 (53.33%), Query Frame = 0
Query:    6 TMRGHSGSHVWRLAVHENNGHQMSLMATGGNDGAIKLWDLAYEAARQEASRSGKISWGQTNIIPTLSALHPPCST 80
            T++GH G HVWR AVH +      L+ATGG DGA+KLWDL  +      +  G   W QT  IP      P  +T
Sbjct:  322 TLQGHVGRHVWRAAVHPSQ----RLLATGGGDGAVKLWDLTRQMMSSSVA-PGSNDWCQTIRIPVAEGATPSSTT 391          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig321.8640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LMQ4_ECTSI7.200e-5536.77Nucleotide binding protein, putative n=1 Tax=Ectoc... [more]
A0A6H5KGL5_9PHAE5.270e-3228.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVQ9_ECTSI3.530e-2144.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMH9_9PHAE1.410e-1023.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1FIC8_PYTOL9.480e-653.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WW86_9STRA2.860e-542.67Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1035..1085
e-value: 10.0
score: 10.6
coord: 1338..1381
e-value: 300.0
score: 1.4
coord: 3..44
e-value: 0.61
score: 18.4
coord: 901..963
e-value: 17.0
score: 9.3
coord: 532..569
e-value: 300.0
score: 1.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 6..44
e-value: 0.0049
score: 17.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 29..45
score: 9.305
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..73
e-value: 3.0E-6
score: 28.3
NoneNo IPR availablePANTHERPTHR14344WD REPEAT PROTEINcoord: 6..682
coord: 908..1709
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 31..45
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 7..1085
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 655..1379

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig321contigH-paniculata_contig321:8203..18615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig321.8640.1mRNA_H-paniculata_contig321.8640.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig321 7406..18712 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig321.8640.1 ID=prot_H-paniculata_contig321.8640.1|Name=mRNA_H-paniculata_contig321.8640.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1714bp
MLPATTMRGHSGSHVWRLAVHENNGHQMSLMATGGNDGAIKLWDLAYEAA
RQEASRSGKISWGQTNIIPTLSALHPPCSTAPVGVAAAKPSYFNAAAANE
RHNKPGPNCGCRRQRQRPAVVRELHLSRSGMAAALLLADGSVWWVSDLAA
GSWVKVTEASDLGKHAAVVLKGSVEDNSAGYGQQGEMPQRGTGKDPRRTE
HGCFQGENETEGVTWDGRLLSKGVSAITVVGCFGIQDTPGAGESSQECCG
GVAGVEDVSEFGDTSSCGASIVVGRDDGWLFILTQQQLSSSVPVVDGERY
RTEEAPIPTLWRVSEQWKGHKARVTSLWPAVCRASTSSGEGDNMLFDALP
SHTAALDTSRLRTCCHGNSNRHGFNGDLVSAAADGTVGWWAWPRDHCCGS
SSAARKEQRTPPVRILCRAGPAATITSFVIDDTHGRIISCSERRNNDRLS
SPSNPRTATGQDMGDRTYHEWNAAGASVFCGDTKGNIYCFLNPIEEHNDA
DGTSMESPTHGGKDGRRETDLEIKPRAAEAIAPCLVLRRQHGKDQISRLA
LMGDCLLSAGHDGHVNHYLVSYHSHDTTDEAPTDPLPRLVLTLVTSYPTS
PVNVISDLWVGGYCNGGGYRPDCSGGRQSKDSSPQRTSRDALRIVVAGRS
GSKFMSVWDVTEGRQLLELECGDRHLAQALLLSWPSALSARSRTPVVPGD
SFSSGRPRIHTSFRSRGCRGAAVTLLPRHTAVFTRPVSATALTTRNDDHR
IVGCRNGTEVAAEGRSSSPCNAEELWTGKAKRKPHPGARERPPVGIRLAF
HSTLVSPQGQETPSVRGARRESCGMPEGSTGEDATATAQSSASRGHREEA
TRESSRLRSFSTSSANIAQATKRRERAESEHVEWKPSAFDGKSSAREHVS
PPPPLQAYAYSIGGAFHNQRVASVRFLPGVEKCTARMGSKDDRQRTGMHL
VTGGEDGVVKLLDVLCSSSSISNNNSSSSSNNNPTVGQQQHHHQLEAALQ
TASSTSGGRTATNGLPPPPSSYTLPGACRMPLQYATTVTQTLPPHESSIG
AIAIEIPGDTIYARGEPPRLVIVSGGGKMELRVWSFAGSAQKGEQASTSS
AFEGDEHGGAPLVRWLLTTTPTPGSTLHAHRIMCLCVLSRRPPSQADIRG
GGGGGGGGGHSMGSGVGKDVLVVAGDSSGGLSVFSIHNVEINAAGDRGDG
GGGGRGVREPRLFPVGRWMNGGRPVLCVVHTRLTTIQLPRTSKPPPTSEL
KTYLSAVAADLVVTGDTGGTVTVWQLVAAARDSSVVHDGSITAGGEEHRS
RGCGQKAHAEVVDGFVYRGPAGRRRGAAEGAEGENGACLVPLLEYRAHQS
GVFCAAVQVAAVGERLLIVTGGDDQAVCVAEVEVLWPEDIFDSSDSDKDS
RNAGVEPKFRSGGCDRLVTARLIEAAPEIIKEASGSAIKGIALLPPIRQA
RPADTASTTSPSAAAATAPATTTTTSSPRAPDTTLGADERSAGIPRSTTM
QGSAQLVATIFTLSRDQRLSRWELSEHPQPSGDEQLAVGSGDFYPCRGNF
EKTFLKSRGGRGKLEQRVSEMGTSRVEVEVNVQKCLGQGQERFVGANTIS
SAAHHGDGWSNKILQRRHRWQLLWKAGCVTDVCDVSSMDVIILPVHEQHG
WTDSDQAGTATGISPTAQHSIVENLRTPDHGGQAVANRDVYLQSALVAVA
GQGLQLVLFDGVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf