prot_H-paniculata_contig3197.8604.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3197.8604.1
Unique Nameprot_H-paniculata_contig3197.8604.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length349
Homology
BLAST of mRNA_H-paniculata_contig3197.8604.1 vs. uniprot
Match: D8LQZ5_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ5_ECTSI)

HSP 1 Score: 422 bits (1086), Expect = 4.420e-144
Identity = 253/395 (64.05%), Postives = 278/395 (70.38%), Query Frame = 0
Query:    1 AESLLSRDSEQLALECRVSLRAVSKLRYLVALRCQAQPIIPDNRLRGDDGGDTSSSRNASSTSNGSNNTLGSGQVGARGQGEDVARSSSAA--------------------------------PVLSFCTADVLYRQAKEVGGYVTTGSDRLDSLLCKGLMLHHVVEVVGRSSAGKTQLCLTAAVAAASHGIGVLYLDTANGGSVRRMQQIARSRYADANGEMTVRQMDALLDRLRIVQAFDISTVISALVAYMDGVTSSSTPSGVYSSCRLVILDSVTAVISPLLGGVKNPAGHGLMATLGHLLNRTASQCSACVLVANSTVASRGGPQQVQDPRVALGMTWEGVPSIRLLLTEAQPDAS----------ARH----PITRRTATLLKHPAQVR 349
            AESLLSRD EQLALEC VS++AVSKLRYLVALRCQ QP +PD R   D+G   +             NT G G  G RG G                                          P+LSF +AD LYRQA++VGG+VTTGSD LD+LLCKGLMLHHVVEVVGRSS+GKTQLCLTAAVAAASHGIGVLY+DTANG SVRRMQQIARSRYADANGEMT RQMDALLDRLR+V+AFDIS V+SALVAY+DGV      +GVYS CRLVILDSVTAVISPLLGG KNPAGHGLMA+LGHLLNR ASQCSACVLVANSTVA RG  ++ + PR ALG+TWEGVPSIR+LL EA   A           A H      + RTATLLKHPAQ R
Sbjct:   27 AESLLSRDPEQLALECGVSMKAVSKLRYLVALRCQPQPPVPDRRAPEDNGDGATP------------NTQGHGGEGKRGAGSSTXXXXXXXXXXXXXXXXXXSPRRIGXXXXXXXXXXXXXXPPLLSFESADALYRQARDVGGFVTTGSDSLDNLLCKGLMLHHVVEVVGRSSSGKTQLCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVVRAFDISRVMSALVAYIDGVMEGGR-NGVYSDCRLVILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLVANSTVAPRGISEE-EGPRAALGLTWEGVPSIRVLLAEASAAAGGASGSGDAGGADHGTVGEASPRTATLLKHPAQAR 407          
BLAST of mRNA_H-paniculata_contig3197.8604.1 vs. uniprot
Match: A0A6H5L2A5_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A5_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 4.910e-69
Identity = 118/141 (83.69%), Postives = 128/141 (90.78%), Query Frame = 0
Query:  146 QLCLTAAVAAASHGIGVLYLDTANGGSVRRMQQIARSRYADANGEMTVRQMDALLDRLRIVQAFDISTVISALVAYMDGVTSSSTPSGVYSSCRLVILDSVTAVISPLLGGVKNPAGHGLMATLGHLLNRTASQCSACVLV 286
            QLCLTAAVAAASHGIGVLY+DTANG SVRRMQQIARSRYADANGEM  RQ+DALLDRLR+V+AFD+S V+SALVAY+DGV      +GVYS CRL+ILDSVTAVISPLLGG KNPAGHGLMA+LGHLLNR ASQCSACVLV
Sbjct:   13 QLCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMAARQVDALLDRLRVVRAFDVSRVMSALVAYIDGVMEGGR-NGVYSDCRLIILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLV 152          
BLAST of mRNA_H-paniculata_contig3197.8604.1 vs. uniprot
Match: A0A835YM23_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM23_9STRA)

HSP 1 Score: 138 bits (347), Expect = 7.030e-34
Identity = 106/287 (36.93%), Postives = 139/287 (48.43%), Query Frame = 0
Query:   92 PVLSFCTADVLYRQAKEVGGYVTTGSDRLDSLLCKGLMLHHVVEVVGRSSAGKTQLCLTAAVAAASHGIGVLYLDTANGGSVRRMQQIARSRYADANGEMTVRQMDALLDRLRIVQAFDISTVISALVAYMDGVTSSSTPSGVYSSC------------RLVILDSVTAVISPLLGGVKNPAGHGLMATLGHLLNRTASQCSACVLVANSTVASRG---------------------GPQQVQDPRVALGMTWEGVPSIRLLLTEAQPDASARHPITRRTATLLKHP 345
            P+  F +A   YR A   GG +  G   +D LL  GL L  V EVVG++ AGKTQLC++AA  AAS GIGVLY+DT NG S RR+Q+IA +R   A          A L  + I + + ++ V++AL    DG+ +    + + ++             RLVILDS  AV++PLLGG  N  G   +ATL   L+ TA   S  VLV N  VA R                              R ALG  W   P++RLLL     D  A+   + R A L KHP
Sbjct:   78 PLAIFESAAARYRYAMRQGGLLQMGCSSIDGLLGGGLALQQVTEVVGQTGAGKTQLCMSAAAVAASSGIGVLYIDTTNGCSPRRLQEIAAARGGSAAAP-------AALSHITIERCYSLANVLAAL----DGLATRLVRTPIATAAXXXXXXXXAHAIRLVILDSAAAVLAPLLGGEGNAPGAAALATLAAALSHTALSLSVAVLVTNGAVADRAPXXXXXXXXXGSRGFGXXXXXXXXXXXXKRAALGARWAAAPAVRLLL-----DGGAQ---SGRVAVLDKHP 345          
BLAST of mRNA_H-paniculata_contig3197.8604.1 vs. uniprot
Match: UPI001BB27994 (DNA repair protein RAD51 homolog 4-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB27994)

HSP 1 Score: 118 bits (296), Expect = 4.180e-27
Identity = 87/247 (35.22%), Postives = 126/247 (51.01%), Query Frame = 0
Query:  102 LYRQAKEVGGYVTTGSDRLDSLLCKGLMLHHVVEVVGRSSAGKTQLCLT-AAVAAASHGIGVLYLDTANGGSVRRMQQIARSRYADANGEMTVRQMDALLDRLRIVQAFDISTVISALVAYMDGVTSSSTPSGVYSSCRLVILDSVTAVISPLLGGVKNPAGHGLMATLGHLLNRTASQCSACVLVANSTVASRGGPQQVQDPRVALGMTWEGVPSIRLLLTEAQPDASARHPITRRTATLLKHPAQ 347
            LY +      Y++TG D +D LL  G+    V EVVG+++ GKTQ CLT A+  A S    VLY+DT  G    R+ +I       A+   + +   A L ++   + FD+  ++  L +    + S +     YSS +LV+LDSVTAV++PLLGG K+  G G+M  L   L   A+  S  V+V N+ V    G     +P+ +LG TW  VP  R+ L     D        RRTA+L+K   Q
Sbjct:   71 LYDEVLSTVAYLSTGCDSIDKLLDSGVYTSEVTEVVGQAAIGKTQFCLTLASCVAVSSEQNVLYVDTNGGFDAGRLHEII------AHKSTSEKITAAALQKVHCAKTFDLYDLLDLLESIKASIDSGTDV--FYSSLKLVVLDSVTAVLAPLLGG-KHSEGQGMMVHLARSLKSLAADYSIAVVVCNNMVRGERG-----EPKPSLGRTWLSVPHTRIQLRADGRDGITSRDDLRRTASLVKSQRQ 303          
BLAST of mRNA_H-paniculata_contig3197.8604.1 vs. uniprot
Match: S8DXH8_9LAMI (RECA_2 domain-containing protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8DXH8_9LAMI)

HSP 1 Score: 121 bits (304), Expect = 1.070e-26
Identity = 89/238 (37.39%), Postives = 130/238 (54.62%), Query Frame = 0
Query:  111 GYVTTGSDRLDSLLCKGLMLHHVVEVVGRSSAGKTQLCLTAAVAAASHGIG-VLYLDTANGGSVRRMQQIARSRYADANGEM--TVRQMDALLDRLRIVQAFDISTVISALVAYMDGVTSSSTPSGVYSSCRLVILDSVTAVISPLLGGVKNPAGHGLMATLGHLLNRTASQCSACVLVANSTVASRGGPQQVQDPRVALGMTWEGVPSIRLLLTEAQPDASARHPITRRTATLLKHP 345
            G+++TG  R+D LL  GL L HV E+VG SS+GKTQ CL  A   A +  G VLY DT N  S RR+ Q        AN E+  TV+Q    + R  +   F +  ++  L+      T + +P       +++I+DSV+++ISP+LGG  NP GH +M  +G +L + A + +  V+V N  V  +GG       + ALG +W+ VP +RLLL+ A P +S          T+LKHP
Sbjct:   85 GFLSTGCGRIDVLLQGGLRLGHVTEIVGPSSSGKTQFCLRTASHVARNFDGEVLYFDTGNSCSARRISQFLNQFTVPANNEVKKTVKQAMCSIVRHSVFDIFKLLDMLHQLLMNKSN-TQAQSP-----FVKMLIIDSVSSLISPILGG-GNPQGHSVMIRMGFMLKKLAYERNISVVVTNHMVGGQGGAS-----KPALGESWKSVPHVRLLLS-ATPGSSI---------TILKHP 300          
BLAST of mRNA_H-paniculata_contig3197.8604.1 vs. uniprot
Match: A0A8B7Y1H2_ACAPL (DNA repair protein RAD51 homolog 4-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y1H2_ACAPL)

HSP 1 Score: 117 bits (292), Expect = 1.640e-26
Identity = 94/238 (39.50%), Postives = 126/238 (52.94%), Query Frame = 0
Query:  113 VTTGSDRLDSLLCKGLMLHHVVEVVGRSSAGKTQLCLTAAV---AAASHGIGVLYLDTANGGSVRRMQQIARSR-YADANGEMTVRQMDALLDRLRIVQAFDISTVISALVAYMDGVTSSSTPSGVYSSCRLVILDSVTAVISPLLGGVKNPAGHGLMATLGHLLNRTASQCSACVLVANSTVASRGGPQQVQDPRVALGMTWEGVPSIRLLLT-EAQPDASARHPI--TRRTATLLK 343
            ++TG   LD LL  GL    + EV G  + GKTQLC+TAA    AAA     VLY+DT  G S +R+Q +   R ++D       + M A   RLR  + FD+  ++S L      + S S P   Y S +L+ +DS+TAV+SPLLGG +   GHGLM  L   L   A + S  +L+ N+ V   G  +     + ALG TW  VP  RLLLT +   DAS + P    RR A L+K
Sbjct:   82 LSTGCTSLDELLDGGLYTSELTEVTGGPATGKTQLCMTAAANITAAAQQN--VLYIDTNGGFSSQRLQDVMAVRGHSD-------KVMAAAFQRLRCTRTFDLFELLSLLEITKSSIDSRSDP--FYESLKLITVDSLTAVVSPLLGG-QQTEGHGLMMHLARSLKALAVEYSVAILLTNNQVRGDGTQR-----KPALGRTWSHVPHCRLLLTHDRSDDASLQTPSHQIRREAKLIK 302          
BLAST of mRNA_H-paniculata_contig3197.8604.1 vs. uniprot
Match: W1PFT7_AMBTC (RECA_2 domain-containing protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1PFT7_AMBTC)

HSP 1 Score: 115 bits (288), Expect = 6.190e-26
Identity = 78/216 (36.11%), Postives = 120/216 (55.56%), Query Frame = 0
Query:  112 YVTTGSDRLDSLLCKGLMLHHVVEVVGRSSAGKTQLCLTAAVAAA-SHGIGVLYLDTANGGSVRRMQQIARSRYADANGEMTVRQMDALLDRLRIVQAFDISTVISALVAYMDGVTSSSTPSGVYSS-CRLVILDSVTAVISPLLGGVKNPAGHGLMATLGHLLNRTASQCSACVLVANSTVASRGGPQQVQDPRVALGMTWEGVPSIRLLLTEAQ 325
            ++ TG D +D+LLC GL   ++ E+ G SS+GKTQ CL AA   A ++   VLYLDT+N  S +R+        A  N     R ++ ++  +     FDI ++   L      ++S    + + +S  RL+I+DS++++I+P+LGG K P GH LM  +G +L + A   +  VLV N TV   GG     + + ALG +W+ VP  RLLL+  Q
Sbjct:   88 FLLTGFDGIDTLLCGGLCEGNLTELAGPSSSGKTQFCLHAAAHVAYTYMCSVLYLDTSNSFSSKRISYRVNRLLASPNKGEKGRSLEGIMSSILSHSVFDIFSMFETLHQLELSLSSQLFQAEIQNSKLRLLIVDSISSLITPILGG-KGPQGHSLMLNVGFILKKLAIDYNLAVLVTNHTVVGEGG-----NSKPALGESWKSVPHTRLLLSRDQ 297          
BLAST of mRNA_H-paniculata_contig3197.8604.1 vs. uniprot
Match: A0A1Y1HKY4_KLENI (DNA repair protein RAD51 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKY4_KLENI)

HSP 1 Score: 115 bits (289), Expect = 6.360e-26
Identity = 88/241 (36.51%), Postives = 129/241 (53.53%), Query Frame = 0
Query:  113 VTTGSDRLDSLLCKGLMLHHVVEVVGRSSAGKTQLCLTAAVAAASH-GIGVLYLDTANGGSVRRMQQIARSRYADANGEMTVRQMDALLDRLRIVQAFDIST---VISALVAYMDGVTSSSTPSG----VYSSCRLVILDSVTAVISPLLGGVKNPAGHGLMATLGHLLNRTASQCSACVLVANSTVASRGGPQQVQDPRVALGMTWEGVPSIRLLLT-EAQPDASARHPITRRTATLLKH 344
            V+TG   +D ++  GL    + E+VG S++GKTQLCL AA AAA      V ++DT+N  S  R+ QI    +         +++  +  R+   +AFDI T   ++  L+ +MDG  S     G     +   +L+ILDS +A+ISP+LGG  +  GH LM +L  LL + A + +  VLV N TV+  GG      P+ ALG +W+ VPS+RL L  E + D          TAT+ KH
Sbjct:   81 VSTGCPSIDDVIGGGLRPGTITELVGTSASGKTQLCLQAAAAAALELRASVAFIDTSNSFSAHRLAQIVTGLHGKDKFVEHKQELRNVARRVLCFKAFDIYTALRLLDDLLVHMDGAESKRGGDGNQGDFFQKLQLLILDSASAIISPVLGGA-HTQGHALMVSLSGLLRQIALKHNIAVLVTNHTVSGEGG-----RPKPALGESWKSVPSVRLALAREDESDCC--------TATVTKH 307          
BLAST of mRNA_H-paniculata_contig3197.8604.1 vs. uniprot
Match: UPI0018D9AD9F (DNA repair protein RAD51 homolog 4-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9AD9F)

HSP 1 Score: 114 bits (285), Expect = 1.620e-25
Identity = 89/238 (37.39%), Postives = 127/238 (53.36%), Query Frame = 0
Query:  113 VTTGSDRLDSLLCKGLMLHHVVEVVGRSSAGKTQLCLTAAVAAASHGI-GVLYLDTANGGSVRRMQQIARSRYADANGEMTVRQMDALLDRLRIVQAFDISTVISALVAYMDGVTSSSTPSG---VYSSCRLVILDSVTAVISPLLGGVKNPAGHGLMATLGHLLNRTASQCSACVLVANSTVASRGGPQQVQDPRVALGMTWEGVPSIRLLLTEAQPDASARHPITR---RTATLLK 343
            ++TG   LD LL  GL    + E+ G  + GKTQLC+T A + A+     VLY+DT  G S +R+Q I  +R        T + M A   RLR  + FD+  ++S L      +T SS  SG    Y+S +LV++DSVTAV++P+LGG +   GHG+M  L   L   A + S  VL+ N+ V   G  +     + ALG TW  VP  RLLLT  + D ++   + R   R A ++K
Sbjct:   82 LSTGCSSLDELLDGGLYTSELTEITGGPATGKTQLCMTTAASVATTAQQNVLYIDTNGGFSSQRLQDIMAAR------GNTDKIMAAAFQRLRCARTFDLFELLSLLE-----MTKSSMDSGSDAFYASLKLVVVDSVTAVVAPVLGG-QQTEGHGMMIHLARSLKALAVEYSVAVLLTNNQVRGDGTQR-----KPALGRTWSHVPHCRLLLTHDRSDDASLCTVNRPINREARIIK 302          
BLAST of mRNA_H-paniculata_contig3197.8604.1 vs. uniprot
Match: V7AFQ9_PHAVU (RECA_2 domain-containing protein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7AFQ9_PHAVU)

HSP 1 Score: 113 bits (283), Expect = 2.840e-25
Identity = 77/222 (34.68%), Postives = 117/222 (52.70%), Query Frame = 0
Query:  102 LYRQAKEVGGYVTTGSDRLDSLLCKGLMLHHVVEVVGRSSAGKTQLCLTAAVAAASHGIGVLYLDTANGGSVRRMQQIARSRYADANGEMTVRQMDALLDRLRIVQAFDISTVISALVAYMDGVTSSSTPSGVYSSCRLVILDSVTAVISPLLGGVKNPAGHGLMATLGHLLNRTASQCSACVLVANSTVASRGGPQQVQDPRVALGMTWEGVPSIRLLLTE 323
            L   A++    ++TG +R+D+LL  GL    + E+VG SS+GKTQ CL  A   A H   V+YLDT N  S  R+ +      + A+      ++  +LDR+     FDI  +   L      + S    S  +   RL+I+DS++++++P+LGG   P GH LM + G LL +   + +  VLV N  V   GG   V  P  ALG +W+ VP +RLL ++
Sbjct:   78 LLEDAQQNKHVLSTGCERIDALLGGGLREGQLTELVGSSSSGKTQACLLTASTVAKHKSSVIYLDTGNSFSPHRIARFVGQ--SSASDNQAAHKLKEVLDRIICYSVFDIYQMFDVLHQLKTNLRSEIVKSNQH--VRLLIVDSISSLVTPILGG-SGPQGHALMISAGFLLKKLGHEHNIAVLVTNHVV---GGEDGVSKP--ALGESWKSVPHVRLLFSQ 289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3197.8604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQZ5_ECTSI4.420e-14464.05RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L2A5_9PHAE4.910e-6983.69Rad51 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YM23_9STRA7.030e-3436.93P-loop containing nucleoside triphosphate hydrolas... [more]
UPI001BB279944.180e-2735.22DNA repair protein RAD51 homolog 4-like n=1 Tax=Ly... [more]
S8DXH8_9LAMI1.070e-2637.39RECA_2 domain-containing protein n=1 Tax=Genlisea ... [more]
A0A8B7Y1H2_ACAPL1.640e-2639.50DNA repair protein RAD51 homolog 4-like n=1 Tax=Ac... [more]
W1PFT7_AMBTC6.190e-2636.11RECA_2 domain-containing protein n=3 Tax=Amborella... [more]
A0A1Y1HKY4_KLENI6.360e-2636.51DNA repair protein RAD51 n=1 Tax=Klebsormidium nit... [more]
UPI0018D9AD9F1.620e-2537.39DNA repair protein RAD51 homolog 4-like n=1 Tax=Pa... [more]
V7AFQ9_PHAVU2.840e-2534.68RECA_2 domain-containing protein n=1 Tax=Phaseolus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 95..349
e-value: 8.6E-40
score: 138.8
NoneNo IPR availablePANTHERPTHR46457FAMILY NOT NAMEDcoord: 95..347
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 96..324
e-value: 3.4E-15
score: 56.0
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 109..290
score: 19.404
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 112..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3197contigH-paniculata_contig3197:2822..17385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3197.8604.1mRNA_H-paniculata_contig3197.8604.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3197 2822..17385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3197.8604.1 ID=prot_H-paniculata_contig3197.8604.1|Name=mRNA_H-paniculata_contig3197.8604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=349bp
AESLLSRDSEQLALECRVSLRAVSKLRYLVALRCQAQPIIPDNRLRGDDG
GDTSSSRNASSTSNGSNNTLGSGQVGARGQGEDVARSSSAAPVLSFCTAD
VLYRQAKEVGGYVTTGSDRLDSLLCKGLMLHHVVEVVGRSSAGKTQLCLT
AAVAAASHGIGVLYLDTANGGSVRRMQQIARSRYADANGEMTVRQMDALL
DRLRIVQAFDISTVISALVAYMDGVTSSSTPSGVYSSCRLVILDSVTAVI
SPLLGGVKNPAGHGLMATLGHLLNRTASQCSACVLVANSTVASRGGPQQV
QDPRVALGMTWEGVPSIRLLLTEAQPDASARHPITRRTATLLKHPAQVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase