prot_H-paniculata_contig3196.8602.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3196.8602.1 vs. uniprot
Match: A0A835ZMS4_9STRA (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMS4_9STRA) HSP 1 Score: 165 bits (418), Expect = 6.760e-51 Identity = 84/106 (79.25%), Postives = 93/106 (87.74%), Query Frame = 0
Query: 11 DEERDEEFATGPLSLLMQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGKKKANAVGKDQKPKAVNKDRYVSKMFLRGDSVVLVLRNP 116
D+ER+EEFA+GPLSLLMQSVKNN QVLINVRNNHKLLAR+KAFDRHCNMVLTDVKEMWT+ PK GKG+KKA+ V NKDRYVSKMFLRGDSV+LVL+NP
Sbjct: 11 DKEREEEFASGPLSLLMQSVKNNNQVLINVRNNHKLLARVKAFDRHCNMVLTDVKEMWTDVPKKGKGQKKAHPV---------NKDRYVSKMFLRGDSVILVLKNP 107
BLAST of mRNA_H-paniculata_contig3196.8602.1 vs. uniprot
Match: A0A7S2XVF6_9STRA (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVF6_9STRA) HSP 1 Score: 160 bits (406), Expect = 4.550e-49 Identity = 82/107 (76.64%), Postives = 90/107 (84.11%), Query Frame = 0
Query: 10 PDEERDEEFATGPLSLLMQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGKKKANAVGKDQKPKAVNKDRYVSKMFLRGDSVVLVLRNP 116
P+ E +EF TGPLS+LMQSVK NTQVLINVRNNHKLLAR+KAFDRHCNMVL +VKEMWTE PKTGKGKKKA K VNKDRY+SKMFLRGDSV+LVL+NP
Sbjct: 10 PEGENKDEFNTGPLSILMQSVKQNTQVLINVRNNHKLLARVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKA---------KPVNKDRYISKMFLRGDSVILVLKNP 107
BLAST of mRNA_H-paniculata_contig3196.8602.1 vs. uniprot
Match: A0A7S2GCZ6_9STRA (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCZ6_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.980e-48 Identity = 78/109 (71.56%), Postives = 94/109 (86.24%), Query Frame = 0
Query: 9 GPDEERDEEFATGPLSLLMQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGKKKANAVGKDQKPKAVNKDRYVSKMFLRGDSVVLVLRNPA 117
GP+ ++++EFATGPLS+LM SVKNNTQVLINVRNNHKLLAR+KAFDRHCNMVL +VKEMWT+ PK+GKG KK+ K VNK+RY+SKMFLRGDSV+LVL+NP+
Sbjct: 12 GPEGDKEQEFATGPLSVLMHSVKNNTQVLINVRNNHKLLARVKAFDRHCNMVLENVKEMWTDVPKSGKGAKKS---------KPVNKERYISKMFLRGDSVILVLKNPS 111
BLAST of mRNA_H-paniculata_contig3196.8602.1 vs. uniprot
Match: A0A6A4WKZ7_AMPAM (Small nuclear ribonucleoprotein Sm D2 n=5 Tax=Bilateria TaxID=33213 RepID=A0A6A4WKZ7_AMPAM) HSP 1 Score: 156 bits (394), Expect = 4.320e-47 Identity = 85/116 (73.28%), Postives = 91/116 (78.45%), Query Frame = 0
Query: 1 MNGEERIKGPDEERDEEFATGPLSLLMQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGKKKANAVGKDQKPKAVNKDRYVSKMFLRGDSVVLVLRNP 116
MN EE K +EEF TGPLS+L QSVKNNTQVLIN RNN KLLAR+KAFDRHCNMVL +VKEMWTE PKTGKGKKKA K VNKDRY+SKMFLRGDSV+LVLRNP
Sbjct: 10 MNPEELAKM----EEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLARVKAFDRHCNMVLENVKEMWTELPKTGKGKKKA---------KPVNKDRYISKMFLRGDSVILVLRNP 112
BLAST of mRNA_H-paniculata_contig3196.8602.1 vs. uniprot
Match: D7FW42_ECTSI (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW42_ECTSI) HSP 1 Score: 153 bits (387), Expect = 1.620e-46 Identity = 80/90 (88.89%), Postives = 81/90 (90.00%), Query Frame = 0
Query: 27 MQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGKKKANAVGKDQKPKAVNKDRYVSKMFLRGDSVVLVLRNP 116
MQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKG+KKA KAVNKDRYVSKMFLRGDSVVLVLRNP
Sbjct: 1 MQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGQKKA---------KAVNKDRYVSKMFLRGDSVVLVLRNP 81
BLAST of mRNA_H-paniculata_contig3196.8602.1 vs. uniprot
Match: F4QA52_CAVFA (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QA52_CAVFA) HSP 1 Score: 154 bits (389), Expect = 1.880e-46 Identity = 79/108 (73.15%), Postives = 92/108 (85.19%), Query Frame = 0
Query: 11 DEERDE--EFATGPLSLLMQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGKKKANAVGKDQKPKAVNKDRYVSKMFLRGDSVVLVLRNP 116
+E+RD+ EF TGPLS+LM+SVKNNTQ+LINVRNN KLLAR++AFDRHCNMVL +VKEMWTE PKTGKGKKKA K VNKDR++SKMFLRGDSV+LVL+NP
Sbjct: 9 EEDRDDLKEFETGPLSILMESVKNNTQILINVRNNKKLLARVRAFDRHCNMVLENVKEMWTEVPKTGKGKKKA---------KPVNKDRFISKMFLRGDSVILVLKNP 107
BLAST of mRNA_H-paniculata_contig3196.8602.1 vs. uniprot
Match: C1BS97_LEPSM (Small nuclear ribonucleoprotein Sm D2 n=8 Tax=Protostomia TaxID=33317 RepID=C1BS97_LEPSM) HSP 1 Score: 154 bits (388), Expect = 3.130e-46 Identity = 79/102 (77.45%), Postives = 84/102 (82.35%), Query Frame = 0
Query: 15 DEEFATGPLSLLMQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGKKKANAVGKDQKPKAVNKDRYVSKMFLRGDSVVLVLRNP 116
+EEF TGPLS+L QSVKNNTQVLIN RNN KLL R+KAFDRHCNMVL VKEMWTE PKTGKGKKKA K VNKDRY+SKMFLRGDSV+LVLRNP
Sbjct: 20 EEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLESVKEMWTEMPKTGKGKKKA---------KPVNKDRYISKMFLRGDSVILVLRNP 112
BLAST of mRNA_H-paniculata_contig3196.8602.1 vs. uniprot
Match: A0A7S3HBV9_9STRA (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBV9_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.920e-46 Identity = 80/107 (74.77%), Postives = 89/107 (83.18%), Query Frame = 0
Query: 12 EERDE--EFATGPLSLLMQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGKKKANAVGKDQKPKAVNKDRYVSKMFLRGDSVVLVLRNP 116
EE+DE EF TGPLS+LMQSVK N+QVLIN RNNHKLLAR+KAFDRHCN+VL +VKEMWTE PKTGKG KKA + VNKDRY+SKMFLRGDSV+LVLRNP
Sbjct: 13 EEKDEQAEFETGPLSVLMQSVKQNSQVLINCRNNHKLLARVKAFDRHCNLVLENVKEMWTETPKTGKGAKKA---------RPVNKDRYISKMFLRGDSVILVLRNP 110
BLAST of mRNA_H-paniculata_contig3196.8602.1 vs. uniprot
Match: A0A2T7P031_POMCA (Small nuclear ribonucleoprotein Sm D2 n=12 Tax=Mollusca TaxID=6447 RepID=A0A2T7P031_POMCA) HSP 1 Score: 153 bits (387), Expect = 4.440e-46 Identity = 79/101 (78.22%), Postives = 85/101 (84.16%), Query Frame = 0
Query: 16 EEFATGPLSLLMQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGKKKANAVGKDQKPKAVNKDRYVSKMFLRGDSVVLVLRNP 116
EEF TGPLS+L QSVKNNTQVLIN RNN KLLAR+KAFDRHCNMVL +VKEMWTE PKTGKGKKK+ K VNKDRY+SKMFLRGDSV+LVLRNP
Sbjct: 19 EEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLARVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKS---------KPVNKDRYISKMFLRGDSVILVLRNP 110
BLAST of mRNA_H-paniculata_contig3196.8602.1 vs. uniprot
Match: C3XTF6_BRAFL (Small nuclear ribonucleoprotein Sm D2 n=6 Tax=Bilateria TaxID=33213 RepID=C3XTF6_BRAFL) HSP 1 Score: 153 bits (386), Expect = 6.500e-46 Identity = 78/101 (77.23%), Postives = 85/101 (84.16%), Query Frame = 0
Query: 16 EEFATGPLSLLMQSVKNNTQVLINVRNNHKLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGKKKANAVGKDQKPKAVNKDRYVSKMFLRGDSVVLVLRNP 116
EEF TGPLS+L QSVKNNTQVLIN RNN KLLAR+KAFDRHCNMVL +VKEMWTE PKTGKGKKK+ K +NKDRY+SKMFLRGDSV+LVLRNP
Sbjct: 19 EEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLARVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKS---------KPINKDRYISKMFLRGDSVILVLRNP 110 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3196.8602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig3196.8602.1 ID=prot_H-paniculata_contig3196.8602.1|Name=mRNA_H-paniculata_contig3196.8602.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bpback to top |