prot_H-paniculata_contig3193.8598.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3193.8598.1
Unique Nameprot_H-paniculata_contig3193.8598.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length129
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3193.8598.1 vs. uniprot
Match: D7G809_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G809_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 1.120e-44
Identity = 68/123 (55.28%), Postives = 90/123 (73.17%), Query Frame = 0 
Query:    2 MPEKKHYSYTNLDDTPKHGEVIESSYLIAERGPKSTWTRITEVLILLATVGACAYLLIFLFHSGNNHQAR--HKAPAKPSRPVGASSSSVHDSALCSDNAACMEKSFQGLCCPDAENKYLPCC 122
            MP KK+YSYTNL DTP+HGE+IESSYL+AE+GPKS WT++ E+++L+AT+G CAYL++FLFH  N+H +     + + P  PVGASSS+  D A C+ N+ C E    G CCP A+  YL CC
Sbjct:    1 MPPKKNYSYTNLADTPQHGEIIESSYLLAEKGPKSIWTKVLEMVVLVATIGGCAYLVVFLFHHANHHDSATAKDSASHPHPPVGASSSTSQDPASCNSNSKCAELELNGFCCPTAKGDYLACC 123
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3193.8598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G809_ECTSI1.120e-4455.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..43
NoneNo IPR availableTMHMMTMhelixcoord: 41..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3193contigH-paniculata_contig3193:6667..10660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3193.8598.1mRNA_H-paniculata_contig3193.8598.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3193 5868..12626 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3193.8598.1 ID=prot_H-paniculata_contig3193.8598.1|Name=mRNA_H-paniculata_contig3193.8598.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp
MMPEKKHYSYTNLDDTPKHGEVIESSYLIAERGPKSTWTRITEVLILLAT
VGACAYLLIFLFHSGNNHQARHKAPAKPSRPVGASSSSVHDSALCSDNAA
CMEKSFQGLCCPDAENKYLPCCPSQPGH*
back to top