prot_H-paniculata_contig3186.8583.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3186.8583.1
Unique Nameprot_H-paniculata_contig3186.8583.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length798
Homology
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BLAST of mRNA_H-paniculata_contig3186.8583.1 vs. uniprot
Match: D7FT04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT04_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 3.270e-43
Identity = 94/143 (65.73%), Postives = 117/143 (81.82%), Query Frame = 0 
Query:    2 DLLVLERLLYRNRSQHRSAKFFALVVKVVRQACRRFAPFKLTELLAEGLGLLSRVPDNRSSSRARESWARSACMTLSRFRLAVMACSEALKASVAASRLLAHQVSQTYFMALSVVLLSCLARLFACNLYLGGRLVEVHRALLR 144
            +L+VL+RLLYRNRSQHRSAK++  V++V R+AC  FA  KL +LLAEGLGL++RVPD+R+  RARE+W RSA   L R R+A +AC+ +L+  V AS+LLAHQVSQTYFMALS V L+ LARLFACNL+LGGRL+ VH ALLR
Sbjct:    2 ELMVLDRLLYRNRSQHRSAKYYTHVLEV-RRACGAFAAPKLPDLLAEGLGLIARVPDSRNG-RAREAWVRSAARGLRRMRVAAVACAHSLETIVKASKLLAHQVSQTYFMALSTVFLASLARLFACNLHLGGRLLLVHGALLR 142
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BLAST of mRNA_H-paniculata_contig3186.8583.1 vs. uniprot
Match: A0A6H5KLL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL0_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 2.910e-14
Identity = 42/63 (66.67%), Postives = 53/63 (84.13%), Query Frame = 0 
Query:   82 LAVMACSEALKASVAASRLLAHQVSQTYFMALSVVLLSCLARLFACNLYLGGRLVEVHRALLR 144
            +A + C+ +L+A V AS+LLAHQVSQTYFMALS  +L+ +ARLFACNL+LGGRL+ VH ALLR
Sbjct:    3 VAAVECAHSLEAIVKASKLLAHQVSQTYFMALSTAILASVARLFACNLHLGGRLLLVHGALLR 65
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3186.8583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT04_ECTSI3.270e-4365.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLL0_9PHAE2.910e-1466.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..798
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3186contigH-paniculata_contig3186:10325..18637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3186.8583.1mRNA_H-paniculata_contig3186.8583.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3186 10323..18637 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3186.8583.1 ID=prot_H-paniculata_contig3186.8583.1|Name=mRNA_H-paniculata_contig3186.8583.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=798bp
QDLLVLERLLYRNRSQHRSAKFFALVVKVVRQACRRFAPFKLTELLAEGL
GLLSRVPDNRSSSRARESWARSACMTLSRFRLAVMACSEALKASVAASRL
LAHQVSQTYFMALSVVLLSCLARLFACNLYLGGRLVEVHRALLRALQAQP
CTSSFLAPGALSANRIPEDTVMFLSRLRGAAGNARRAASSSPPPPSSSPM
KKKKTNSANIPSFAATTTATATATATATAIASRSKNTSTLTTDIPSKVLP
GGVDTTPVADPDVVSSTNAVNETTDRNVLEDNDDDDDEGVHVGRVQATEG
CPSDGEQDVDGVSRQRRGGVIAATEAARAAVAPGEGIEASSVGGGRVLGG
SWRRAGGRTEVGRQGAGSGRAGGYRTPDYKKQVVLASEFSDSDSSSDEGN
DSVFSSRGDKPRRNQAADVKRLSTGMKRPRSATTDGALDAAQPASKSKPR
PDKESTKLPSPPPSPPPSPPLLPAEPLVASLAPSLSLAGTTSFFSTEASH
RPLESPQLQLLPGTLEQAAAAAATPATKDVLVEDNPVVAAASKTCVVPAV
TTTAAAAAAAHSVAVGDDFPEADDAKRVRRAFPSKETHSVEGVVPEMRRE
KGIPNASRERSKVRGLAGVAAAQEMKGVGIRGKGDTKDPGVGDGVGGGGS
GDTEIGDRSIQKSKAKGSGGDSRRAHEKKSGIGGGDSEAAGLSGGVSCSP
GDGRTGGATLSSQKRAAAKNSARVFAGSNGQGAAGRGRRKDGGMPVSLES
RIQSSPTAAVSVVAALAATDKTPKKKEKKNKKVKGAIDSAGGRGGGGG
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