prot_H-paniculata_contig3180.8568.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3180.8568.1
Unique Nameprot_H-paniculata_contig3180.8568.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length119
Homology
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BLAST of mRNA_H-paniculata_contig3180.8568.1 vs. uniprot
Match: D7FM73_ECTSI (Fibronectin type-III domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM73_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 6.850e-26
Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 0 
Query:   41 RSTLHQEWANCRSESV--EKGSPTESFHKKIDGLNPSSSYIFRLYAVTSDGQEIGPGPEVAFDTEVVSCAPKSNACCVV 117
            R  L  +WA CRS ++  E+ S TE    K+ GLNPSSSYIFRLY VT+ GQE+GPGPE+AFDTEVVSCAP + +CC +
Sbjct:   33 REILVSDWAGCRSIAIAPEQSSSTE-MSTKVTGLNPSSSYIFRLYTVTAAGQEVGPGPEIAFDTEVVSCAPTNKSCCTI 110
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BLAST of mRNA_H-paniculata_contig3180.8568.1 vs. uniprot
Match: A0A835YPU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU1_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 8.010e-10
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0 
Query:   61 PTESFHK--KIDGLNPSSSYIFRLYAVTSDGQEIGPGPEVAFDTEVVSCAPKSNACC 115
            P+++ H+  K+  L PS +YIFRL+ + + G+  GPGP+ AFDTEVVSC P S + C
Sbjct:   55 PSQTGHETVKVTDLLPSMTYIFRLWIMGAGGKLEGPGPDTAFDTEVVSCTPTSRSVC 111
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3180.8568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM73_ECTSI6.850e-2660.76Fibronectin type-III domain-containing protein n=2... [more]
A0A835YPU1_9STRA8.010e-1049.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3180contigH-paniculata_contig3180:2486..6935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3180.8568.1mRNA_H-paniculata_contig3180.8568.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3180 883..7366 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3180.8568.1 ID=prot_H-paniculata_contig3180.8568.1|Name=mRNA_H-paniculata_contig3180.8568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
MSSTFLDLHQSAKKQHQPHQVRVFISTHICFLYFRVFSPMRSTLHQEWAN
CRSESVEKGSPTESFHKKIDGLNPSSSYIFRLYAVTSDGQEIGPGPEVAF
DTEVVSCAPKSNACCVVA*
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