prot_H-paniculata_contig318.8566.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig318.8566.1
Unique Nameprot_H-paniculata_contig318.8566.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length525
Homology
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BLAST of mRNA_H-paniculata_contig318.8566.1 vs. uniprot
Match: D7G8Y0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Y0_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 1.170e-65
Identity = 284/555 (51.17%), Postives = 332/555 (59.82%), Query Frame = 0 
Query:    3 MVRRPQPRPG-PGKKNSGTEFKLTYSVSRLLTMGKDSVSEENGCPPPEGWNKYGYNAIGPLEEEGRRTGRSTYTKEQLATLVLRPGSARDLHADNVTI---RHANDTDRSPVLGPRA-------PRGGAGGLS---------WGDRERDRDRFGDSKXXXXXXXDGRDRGMSNRFDQDRXXXXXXXXXXRPGAPRDVANRPPSRWDALKPDRERDRGYNNXXXXXXXXXXVGGGRQDARVGGXRDXXXXXXXXXXXXXXXXXXXGGRR--DGVGDGGLGAHDRALXXXXXXXXXXXXXXXXXXXXXXGV---------RYGGGKNEADIWDMPDSAVPGEGGITITTGVEAPPKNSRAAGLRSAEREQRDKERARESAMTFEDQKLQFEKDRAAFLQDRNKGAKANGDTAAADLEFPDMGGGFLTGGLSARDGKGGGIEEEQDTSLAAPAPAQTAEAPAAKDKEQDI--DSFLGGLFASKRDGGGGGTRGVGNTAGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPGAGLFSFVAPGNSISTIDKFAEVRIG 524
            M+RRP  R G  GKK SGT FK+TYSV++LL+MGK+ +  E GCPPPEGW+KY Y+ IGPL +E      S   KE+ A L ++PGSARDLH++++     +   D D+SP LGPR         RG               WGDR+RD DRFGD   XXXXXX               XXXXXXXXXX PG       R PSRWDALKPDRERDRGYN XXXXXXXXXX            X  XXXXXXXXXXXXXXXXXXX      DG+ DGGLGAHDRA+           XXXXXXXXXXX           RYGG  +EADIWDMP + +PG+GG T     + PPKN+RAAGLRSA+RE+R++ R ++ A  FE ++L+FE++RA  LQ R+ G KANG  A    EFPDMGGGFL GG+                               ++D+ Q +   S L  +F +   G G             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPG GLFSF+APGNSISTIDKF E   G
Sbjct:    1 MMRRPPTRAGLGGKKASGTGFKITYSVNQLLSMGKELMESEAGCPPPEGWDKYEYDTIGPLIDENNTRIPS---KEEAAALKMKPGSARDLHSEHIAALVAKQGADPDQSPSLGPRGGGDRPDRDRGXXXXXXXXXXXXXXXWGDRDRDWDRFGDRNKXXXXXXXX----XXXXXXXXXXXXXXXXXXXGPGGA--GGGRAPSRWDALKPDRERDRGYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLHDGGLGAHDRAVAHEKAIAAGGAXXXXXXXXXXXXXXXXXXXXXXRYGG-TSEADIWDMP-TTLPGDGGAT-----KEPPKNTRAAGLRSADRERREENRKKDEAAAFERERLEFERERAKVLQGRD-GGKANGGPA----EFPDMGGGFLGGGIGDXXXXXXXXXXXXXXXXXXXXXXXXGSGSGSQDQPQLVKNQSVLDRVFGA---GAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPGGGLFSFMAPGNSISTIDKFTEATRG 531
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig318.8566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8Y0_ECTSI1.170e-6551.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 335..355
NoneNo IPR availableCOILSCoilCoilcoord: 357..377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig318contigH-paniculata_contig318:6421..17940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig318.8566.1mRNA_H-paniculata_contig318.8566.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig318 6421..19465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig318.8566.1 ID=prot_H-paniculata_contig318.8566.1|Name=mRNA_H-paniculata_contig318.8566.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=525bp
MTMVRRPQPRPGPGKKNSGTEFKLTYSVSRLLTMGKDSVSEENGCPPPEG
WNKYGYNAIGPLEEEGRRTGRSTYTKEQLATLVLRPGSARDLHADNVTIR
HANDTDRSPVLGPRAPRGGAGGLSWGDRERDRDRFGDSKGDRDRDRDGRD
RGMSNRFDQDRDRRGDRDGRDRPGAPRDVANRPPSRWDALKPDRERDRGY
NNRNNRERDDDDVGGGRQDARVGGGRDRDRDRDRDRDRDRDRDRDRGGRR
DGVGDGGLGAHDRALAGGGRDRDRDRERDRDRDRDRDGVRYGGGKNEADI
WDMPDSAVPGEGGITITTGVEAPPKNSRAAGLRSAEREQRDKERARESAM
TFEDQKLQFEKDRAAFLQDRNKGAKANGDTAAADLEFPDMGGGFLTGGLS
ARDGKGGGIEEEQDTSLAAPAPAQTAEAPAAKDKEQDIDSFLGGLFASKR
DGGGGGTRGVGNTAGKGVVGGGGDEGGGGGGGGGGGGGGRGGGGGGFPGA
GLFSFVAPGNSISTIDKFAEVRIG*
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