prot_H-paniculata_contig3178.8558.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3178.8558.1
Unique Nameprot_H-paniculata_contig3178.8558.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
BLAST of mRNA_H-paniculata_contig3178.8558.1 vs. uniprot
Match: D7FVA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVA2_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.000e-48
Identity = 78/112 (69.64%), Postives = 90/112 (80.36%), Query Frame = 0
Query:    5 MQLFQTPRVNGAVLGQFVNRAVCVVGKVVSHQEGAPEAQLQTSDDKIITVQVAAGSSWTSQYVEVIGHLHDEFTLQEFKSTDYGDSFDMEMYNRAVQLMTGTFSHLFYSAQE 116
            M  FQTPRVNGAVL QF+   VCVVGKV+S+QEG  EAQL+TSD   ITVQ+ AGS+WTSQYVEVIGHLH+   LQEFKSTD+GD FD+  Y+ AV LMTG FS+LFY+ QE
Sbjct:    1 MAEFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDMFDLRKYDEAVSLMTGKFSYLFYNPQE 112          
BLAST of mRNA_H-paniculata_contig3178.8558.1 vs. uniprot
Match: A0A7S2UTE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTE4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.110e-27
Identity = 46/104 (44.23%), Postives = 74/104 (71.15%), Query Frame = 0
Query:   10 TPRVNGAVLGQFVNRAVCVVGKVVSHQEGAPEAQLQTSDDKIITVQVAAGSSWTSQYVEVIGHLHDEFTLQEFKSTDYGDSFDMEMYNRAVQLMTGTFSHLFYS 113
            TPR+NG++   FV R VC+VGKV+  QE +  A +Q+SD   + V +A GSS+ + +VE++G +  + +++EFKS DYG++FD+++YN+ +QL  G +  LFYS
Sbjct:   11 TPRINGSLRQNFVGRPVCLVGKVLDVQENSGSAVIQSSDGSSVQVVMAPGSSYLTSFVEIVGEVLPDLSIKEFKSIDYGENFDLDLYNQVLQLANGKYQKLFYS 114          
BLAST of mRNA_H-paniculata_contig3178.8558.1 vs. uniprot
Match: A0A8K1C3J4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3J4_PYTOL)

HSP 1 Score: 92.8 bits (229), Expect = 3.930e-22
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 0
Query:   11 PRVNGAVLGQFVNRAVCVVGKVVSHQEGAPEAQLQTSDDKIITVQVAAGSSWTSQYVEVIGHLHDEFTLQEFKSTDYGDSFDMEMYNRAVQLMTGTFSHLF 111
            PRVN   +G FV R V +VG V SH   A    L+TSD  ++ V    GS ++S++VEVIG + D  TLQEFK+T +GD+FD+E Y++ VQ+    F HLF
Sbjct:   12 PRVNKKTMGSFVGRTVAIVGAVESHMPTA--VVLRTSDGGMVNVNPMPGSDYSSKFVEVIGRVVDNNTLQEFKTTLFGDNFDLETYDQFVQVAQSKFRHLF 110          
BLAST of mRNA_H-paniculata_contig3178.8558.1 vs. uniprot
Match: A0A024UW39_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UW39_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.150e-20
Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 0
Query:   11 PRVNGAVLGQFVNRAVCVVGKVVSHQEGAPEAQLQTSDDKIITVQVAAGSSWTSQYVEVIGHLHDEFTLQEFKSTDYGDSFDMEMYNRAVQLMTGTFSHLF 111
            PRVN A+L QFV   V +VG + S      +A L+TSD+  +TV    G+ ++S+YVEVIG +  + +L+EFK T +GD FD++ Y++ VQL+ G +S LF
Sbjct:    8 PRVNKAILAQFVGHTVSLVGSIESWT--GSQAVLKTSDNGFVTVHPQPGADYSSKYVEVIGSVQPDGSLKEFKCTSFGDDFDLKNYDKLVQLIHGKYSTLF 106          
BLAST of mRNA_H-paniculata_contig3178.8558.1 vs. uniprot
Match: D0N6F0_PHYIT (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0N6F0_PHYIT)

HSP 1 Score: 86.7 bits (213), Expect = 1.100e-19
Identity = 43/102 (42.16%), Postives = 66/102 (64.71%), Query Frame = 0
Query:   10 TPRVNGAVLGQFVNRAVCVVGKVVSHQEGAPEAQLQTSDDKIITVQVAAGSSWTSQYVEVIGHLHDEFTLQEFKSTDYGDSFDMEMYNRAVQLMTGTFSHLF 111
            +PRVN   +G +V   V +VG V SH   A    L+TSD +I+ V+   G+ + S+ VEVIG + D  T++EFK+T +GD+FD+++Y++ VQL    + HLF
Sbjct:   13 SPRVNKKTMGAYVGHTVALVGAVESHSPTA--VVLRTSDGEIVNVKTQPGTDYGSKVVEVIGRVEDSETIREFKTTLFGDNFDLDVYDQFVQLSQTKYKHLF 112          
BLAST of mRNA_H-paniculata_contig3178.8558.1 vs. uniprot
Match: H3H303_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H303_PHYRM)

HSP 1 Score: 84.7 bits (208), Expect = 6.250e-19
Identity = 43/102 (42.16%), Postives = 65/102 (63.73%), Query Frame = 0
Query:   10 TPRVNGAVLGQFVNRAVCVVGKVVSHQEGAPEAQLQTSDDKIITVQVAAGSSWTSQYVEVIGHLHDEFTLQEFKSTDYGDSFDMEMYNRAVQLMTGTFSHLF 111
            +PRVN   +G +V   V +VG V SH   A   +L+TSD  I+ V    G+ + S+ VEVIG + D  ++QEFK+T +GD+FD+++Y++ VQL    + HLF
Sbjct:   13 SPRVNKKTMGAYVGHTVALVGAVESHTPTA--VKLRTSDGGIVNVTPQPGTDYGSKVVEVIGRVTDSESIQEFKTTLFGDNFDLDVYDQFVQLAQSKYKHLF 112          
BLAST of mRNA_H-paniculata_contig3178.8558.1 vs. uniprot
Match: A0A484EA13_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA13_BRELC)

HSP 1 Score: 84.0 bits (206), Expect = 1.160e-18
Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 0
Query:   10 TPRVNGAVLGQFVNRAVCVVGKVVSHQEGAPEAQLQTSDDKIITVQVAAGSSWTSQYVEVIGHLHDEFTLQEFKSTDYGDSFDMEMYNRAVQLMTGTFSHLF 111
            +PRVN   +G +V   V VVG V  H   A    L+TSD  I+ V    GS + S+ VEVIG + D  TLQEFK+T +GD+FD+++Y++ VQL    + +LF
Sbjct:   10 SPRVNKTTMGGYVGHTVAVVGTVEKHSPTA--VVLRTSDGGIVNVTPQPGSDYGSKVVEVIGRVVDSETLQEFKTTLFGDNFDLDVYDQFVQLSHSKYKYLF 109          
BLAST of mRNA_H-paniculata_contig3178.8558.1 vs. uniprot
Match: A0A225WD33_9STRA (Uncharacterized protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A225WD33_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.250e-18
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   10 TPRVNGAVLGQFVNRAVCVVGKVVSHQEGAPEAQLQTSDDKIITVQVAAGSSWTSQYVEVIGHLHDEFTLQEFKSTDYGDSFDMEMYNRAVQLMTGTFSHLF 111
            +PRVN   +G +V   V +VG V SH   A    L+TSD +I+ V    GS + S+ VEVIG + D  T+QEFK+T +GD+FD+++Y++ VQL    +  LF
Sbjct:   13 SPRVNKKTMGAYVGHTVALVGAVESHSPTA--VVLRTSDGEIVNVTPQPGSDYGSKVVEVIGRVVDTETIQEFKTTLFGDNFDLDVYDQFVQLSQSKYKQLF 112          
BLAST of mRNA_H-paniculata_contig3178.8558.1 vs. uniprot
Match: F0W7W7_9STRA (Uncharacterized protein AlNc14C203G8745 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7W7_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.430e-18
Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    5 MQLFQTPRVNGAVLGQFVNRAVCVVGKVVSHQEGAPEAQLQTSDDKIITVQVAAGSSWTSQYVEVIGHLHDEFTLQEFKSTDYGDSFDMEMYNRAVQLMTGTFSHLF 111
            M     PRVN  +L  F+ + V +VG V  H   A    L++SD   + VQ   GS + S+YVEVIG + +  T++EFK T +G+ FDME YN+ V+L    F HLF
Sbjct:    1 MNTSTAPRVNQKLLRNFIGKTVALVGNVEHHNPTA--VVLRSSDGMTVNVQPKPGSDYGSKYVEVIGRVLENGTIEEFKVTLFGEKFDMETYNQMVELAHTEFRHLF 105          
BLAST of mRNA_H-paniculata_contig3178.8558.1 vs. uniprot
Match: A0A1V9ZKF2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKF2_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.140e-18
Identity = 40/101 (39.60%), Postives = 66/101 (65.35%), Query Frame = 0
Query:   11 PRVNGAVLGQFVNRAVCVVGKVVSHQEGAPEAQLQTSDDKIITVQVAAGSSWTSQYVEVIGHLHDEFTLQEFKSTDYGDSFDMEMYNRAVQLMTGTFSHLF 111
            PRVN A++  ++NR V +VG + S    +  A ++ SD  ++T+  + G+ ++S++VEVIG +  + +LQEFK T YGD FD+  Y++ V LM G F+ +F
Sbjct:    8 PRVNKALMAGYINRTVALVGSMESWTGNS--AVVKASDGGLVTIHPSPGADYSSKFVEVIGQVQPDGSLQEFKCTSYGDDFDLANYDKLVALMHGKFAPMF 106          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3178.8558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVA2_ECTSI1.000e-4869.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UTE4_9STRA2.110e-2744.23Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1C3J4_PYTOL3.930e-2247.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024UW39_9STRA1.150e-2044.55Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
D0N6F0_PHYIT1.100e-1942.16Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
H3H303_PHYRM6.250e-1942.16Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A484EA13_BRELC1.160e-1844.12Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A225WD33_9STRA1.250e-1843.14Uncharacterized protein n=9 Tax=Peronosporaceae Ta... [more]
F0W7W7_9STRA1.430e-1842.06Uncharacterized protein AlNc14C203G8745 n=1 Tax=Al... [more]
A0A1V9ZKF2_9STRA2.140e-1839.60Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013970Replication factor A protein 3PFAMPF08661Rep_fac-A_3coord: 5..105
e-value: 6.8E-19
score: 68.2
NoneNo IPR availableGENE3D2.40.50.140coord: 7..115
e-value: 8.0E-28
score: 98.5
NoneNo IPR availablePANTHERPTHR15114FAMILY NOT NAMEDcoord: 7..113
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 9..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3178contigH-paniculata_contig3178:3217..7758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3178.8558.1mRNA_H-paniculata_contig3178.8558.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3178 3176..8349 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3178.8558.1 ID=prot_H-paniculata_contig3178.8558.1|Name=mRNA_H-paniculata_contig3178.8558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MSSDMQLFQTPRVNGAVLGQFVNRAVCVVGKVVSHQEGAPEAQLQTSDDK
IITVQVAAGSSWTSQYVEVIGHLHDEFTLQEFKSTDYGDSFDMEMYNRAV
QLMTGTFSHLFYSAQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013970Rfa2
IPR012340NA-bd_OB-fold