prot_H-paniculata_contig31693.8540.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31693.8540.1
Unique Nameprot_H-paniculata_contig31693.8540.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length133
Homology
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BLAST of mRNA_H-paniculata_contig31693.8540.1 vs. uniprot
Match: A0A6H5KZD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZD1_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 5.690e-23
Identity = 72/144 (50.00%), Postives = 86/144 (59.72%), Query Frame = 0 
Query:    1 MLLAREREAGERREAREAGRRVKETDEKKLFSAFRAIELPATRGPDWATIKAYQDLVRKQRTRARAAEIAATSSLPTRMEKHAAMH------------SGAAENDNCSKGRMCRVGEPGAEETEIFRKTDPEEIGIITARRQKR 132
            +LLARE EA  RRE R A  + KE +  +L S+FRA EL AT GPDWATIKA+QDLVRKQRTR RAA +AATSSLP RM +HAAM             SG  + +  + GR    G  G          DP +IG +  RRQ+R
Sbjct:  298 VLLARETEAALRREQRVAAAKEKEEEGLRLSSSFRAKELHATNGPDWATIKAHQDLVRKQRTRDRAAFLAATSSLPARMAQHAAMQAVAEDRASANVRSGVRDTNGDNGGRGSVGGGAGT--------VDPGDIGRVMKRRQER 433
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BLAST of mRNA_H-paniculata_contig31693.8540.1 vs. uniprot
Match: D7G410_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G410_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 3.960e-18
Identity = 59/110 (53.64%), Postives = 72/110 (65.45%), Query Frame = 0 
Query:   27 EKKLFSAFRAIELPATRGPDWATIKAYQDLVRKQRTRARAAEIAATSSLPTRMEKHAAMHSGAAE--NDNCSKGRMCRVGEPGAEETEI--FRKTDPEEIGIITARRQKR 132
            E +L S+FRA EL AT GPDWATIKA+QDLVRKQRTR RAA +AATSSLP RM +HAAM + A +  + N   G   + GE G   +        DP +IG +  RRQ+R
Sbjct:  280 ELRLSSSFRAKELHATNGPDWATIKAHQDLVRKQRTRDRAAFLAATSSLPARMARHAAMQAVAEDRASANVRSGAGDKSGEHGRRGSMGGGTGTVDPGDIGRVMQRRQER 389
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31693.8540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZD1_9PHAE5.690e-2350.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G410_ECTSI3.960e-1853.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31693contigH-paniculata_contig31693:1915..2431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31693.8540.1mRNA_H-paniculata_contig31693.8540.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31693 1906..2431 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31693.8540.1 ID=prot_H-paniculata_contig31693.8540.1|Name=mRNA_H-paniculata_contig31693.8540.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp
MLLAREREAGERREAREAGRRVKETDEKKLFSAFRAIELPATRGPDWATI
KAYQDLVRKQRTRARAAEIAATSSLPTRMEKHAAMHSGAAENDNCSKGRM
CRVGEPGAEETEIFRKTDPEEIGIITARRQKR*
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