prot_H-paniculata_contig3154.8512.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3154.8512.1
Unique Nameprot_H-paniculata_contig3154.8512.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length982
Homology
BLAST of mRNA_H-paniculata_contig3154.8512.1 vs. uniprot
Match: D8LTT7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT7_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 1.360e-57
Identity = 148/314 (47.13%), Postives = 180/314 (57.32%), Query Frame = 0
Query:    1 MILLYPIGIPFMFAIVLLQRKDKINPPTLD-ELVEARG----------RARGNKSRNGKPRRSPSTAINPMVSTKQRIEDIMEKERQTPSREHSARRSXXXXXXXXXXXXXXKSGGDGRGCRVSEKEKRCSNRYSTLSELKDGAGAGGHS-----------------GAEFAREQMLRRRLQDPDLQPTKFLWEPYEPHNYYYETVECGRRCLLTGALVFVMPNTAVQVAGACVFAFLSLLVFELLRPHISDTDAGLYRTGCIVIFFSNFLGLMAKADISGEKAQSQEIFGLVLILVHFGMVVSIIVQLYFGIQ 286
            MILLYPIG+P +FA++LL+R++KINPPT   +L  A G           AR     +G P  + +T      +  +   DI     +  SR   ARR                S GD      S+  +RCS            +G                      G    RE++L  R QDPDLQ T+FLWEPYEP NYYYETVECGRRCLLTGALVFV+PNTA Q AGA VFAF+ LL FELLRPH+S TDA +YR GCI IFFSNFLGLMAKAD+S E+AQSQE +GL+LI VH  MV++I+ Q Y  +Q
Sbjct: 1373 MILLYPIGVPMLFAVLLLKRREKINPPTQTLDLAAATGPVLMERVSSDTARMENEGSGHPGAAAATPRATPTARGRDSGDIELAGMKDTSR--GARRGSAVSVA---------SEGD------SQYHRRCSGEGERRPLSNGSSGXXXXXXXXXXXXXXXXXXXXXXGLVQDREEVLENRAQDPDLQSTRFLWEPYEPDNYYYETVECGRRCLLTGALVFVLPNTAGQAAGASVFAFVGLLGFELLRPHLSHTDAWMYRIGCITIFFSNFLGLMAKADVSDEEAQSQEAYGLLLIAVHVLMVLAILAQAYVSMQ 1669          
BLAST of mRNA_H-paniculata_contig3154.8512.1 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 3.120e-36
Identity = 71/146 (48.63%), Postives = 107/146 (73.29%), Query Frame = 0
Query:  146 EQMLRRRLQDPDLQPTKFLWEPYEPHNYYYETVECGRRCLLTGALVFVMPNTAVQVAGACVFAFLSLLVFELLRPHISDTDAGLYRTGCIVIFFSNFLGLMAKADISGEKAQSQEIFGLVLILVHFGMVVSIIVQLYFGIQAVSEE 291
            E+ L +R ++PDL P+ FLW+ + P  YYYE VECGRR LLTG L+F+ PNTA QVA AC+FAF+SLL FELLRPH+   D+ LYR GC+ IF SNFL L+ K D +G+   ++++FG ++I+++  +++++++  +F +Q   +E
Sbjct: 1314 EEKLEKRRRNPDLVPSMFLWKDFGPDMYYYEVVECGRRILLTGVLIFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCMCIFLSNFLALLIKVDSAGDS--NRDVFGWIMIVINLLLIMAVLLASWFSMQQTMDE 1457          
BLAST of mRNA_H-paniculata_contig3154.8512.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 3.970e-36
Identity = 78/152 (51.32%), Postives = 106/152 (69.74%), Query Frame = 0
Query:  146 EQMLRRRLQDPDLQPTKFLWEPYEPHNYYYETVECGRRCLLTGALVFVMPNTAVQVAGACVFAFLSLLVFELLRPHISDTDAGLYRTGCIVIFFSNFLGLMAKADISGEKAQSQEIFGLVLILVHFGMVVSIIVQLYFGIQAVSEELDDTFE 297
            E+ L++R Q+PDL P+ FLW+ ++P  YYYE +ECGRR LLTGAL+F+ P+TA Q A AC+FAF SLL FELLRPH+   D+ LYR GC+ IF SNFL L+ K D +GE  +S  I G +LI V+  +VV+++   +F  Q   + +DD  E
Sbjct:  858 EERLQKRRQNPDLVPSMFLWKDFDPDMYYYEVIECGRRILLTGALIFIAPHTAAQAAMACMFAFASLLGFELLRPHLDPADSWLYRLGCVTIFLSNFLALLTKVDAAGESNRS--ILGGILIAVNVLLVVAVLASTWFATQ---QTVDDNRE 1004          
BLAST of mRNA_H-paniculata_contig3154.8512.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 2.200e-35
Identity = 80/173 (46.24%), Postives = 115/173 (66.47%), Query Frame = 0
Query:  123 YSTLSELKDGAGAGGHSGAEFAREQMLRRRLQDPDLQPTKFLWEPYEPHNYYYETVECGRRCLLTGALVFVMPNTAVQVAGACVFAFLSLLVFELLRPHISDTDAGLYRTGCIVIFFSNFLGLMAKADISGEKAQSQEIFGLVLILVHFGMVVSIIVQLYFGIQAVSEELDDT 295
            YST  EL DG  + G    E   +  L +R Q+PDL P+ FLW+ + P  YYYE +ECGRR LLTGAL+F+ P+T  Q A AC+FAF SLL FELLRPH+   D+ LYR GC+VIF SNFL L+ KAD +GE ++S  + G +++ ++  ++++++   +F  Q   + +DD+
Sbjct: 1382 YSTGLEL-DGEMSEGPRETEEELQDRLEKRRQNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGALIFIAPHTVAQAAIACMFAFASLLGFELLRPHLDPADSWLYRLGCVVIFLSNFLALLIKADTAGEGSRS--VLGGIMVAINIFLILAVLFSTWFATQ---QSVDDS 1548          
BLAST of mRNA_H-paniculata_contig3154.8512.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 1.480e-34
Identity = 73/146 (50.00%), Postives = 104/146 (71.23%), Query Frame = 0
Query:  146 EQMLRRRLQDPDLQPTKFLWEPYEPHNYYYETVECGRRCLLTGALVFVMPNTAVQVAGACVFAFLSLLVFELLRPHISDTDAGLYRTGCIVIFFSNFLGLMAKADISGEKAQSQEIFGLVLILVHFGMVVSIIVQLYFGIQAVSEE 291
            E+ L +R ++PDL P+ FLW+ + P  YYYE VECGRR LLTG LVF+ PNTA QVA AC+FAF+SLL FELLRPH+   D+ LYR GC+ IF SNFL L+ K D SG    + ++FG ++I ++  +++++++  +F +Q   +E
Sbjct: 1324 EEKLEKRRRNPDLIPSMFLWKDFGPEIYYYEVVECGRRILLTGVLVFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCLCIFLSNFLALLIKVD-SGVDG-NHDVFGAIMIGINMFLIMAVLLASWFSMQQTMDE 1467          
BLAST of mRNA_H-paniculata_contig3154.8512.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 1.340e-32
Identity = 69/131 (52.67%), Postives = 91/131 (69.47%), Query Frame = 0
Query:  140 GAEFAREQMLRRRLQDPDLQPTKFLWEPYEPHNYYYETVECGRRCLLTGALVFVMPNTAVQVAGACVFAFLSLLVFELLRPHISDTDAGLYRTGCIVIFFSNFLGLMAKADISGEKAQSQEIFGLVLILVH 270
            G +   ++ + +R  D  + PT FLW  Y P+ YYYE  EC RR LLTG LVF++P+T  QVA  CVFAFLSLL FELLRPH    D  LYRTGC+VIFF+NFL LM KA+++   ++  E++ +VLI+V+
Sbjct: 1510 GRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVN 1640          
BLAST of mRNA_H-paniculata_contig3154.8512.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.410e-32
Identity = 70/131 (53.44%), Postives = 90/131 (68.70%), Query Frame = 0
Query:  140 GAEFAREQMLRRRLQDPDLQPTKFLWEPYEPHNYYYETVECGRRCLLTGALVFVMPNTAVQVAGACVFAFLSLLVFELLRPHISDTDAGLYRTGCIVIFFSNFLGLMAKADISGEKAQSQEIFGLVLILVH 270
            G +   E+ + +R  D  + PT FLW  Y P+ YYYE  EC RR LLTG LVFV+P+T  QVA  CVFAFLSLL FELLRPH    D  LYRTGC+VIFF+NFL LM KA+++   ++   ++ +VLI+V+
Sbjct: 1716 GRKHVVEEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFVVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVANPDSRGSAVYSVVLIIVN 1846          
BLAST of mRNA_H-paniculata_contig3154.8512.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 8.450e-32
Identity = 69/146 (47.26%), Postives = 98/146 (67.12%), Query Frame = 0
Query:  146 EQMLRRRLQDPDLQPTKFLWEPYEPHNYYYETVECGRRCLLTGALVFVMPNTAVQVAGACVFAFLSLLVFELLRPHISDTDAGLYRTGCIVIFFSNFLGLMAKADISGEKAQSQEIFGLVLILVHFGMVVSIIVQLYFGIQAVSEE 291
            E+ L +R  +PDL P+ FLW+ + P  YYYE +ECGRR LLTG L+F    TA Q A AC+FAF+SLL FELLRPH+   DA LYR GC++IF SNFL L+ K D +GE  ++    G +LI V+  ++++++   +F  Q + ++
Sbjct: 1353 EERLEQRRNNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADAWLYRLGCVIIFLSNFLALLIKVDAAGEGNRAA--LGGILIAVNVFLILAVLSTSWFATQQMVDD 1496          
BLAST of mRNA_H-paniculata_contig3154.8512.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 8.290e-31
Identity = 67/146 (45.89%), Postives = 98/146 (67.12%), Query Frame = 0
Query:  146 EQMLRRRLQDPDLQPTKFLWEPYEPHNYYYETVECGRRCLLTGALVFVMPNTAVQVAGACVFAFLSLLVFELLRPHISDTDAGLYRTGCIVIFFSNFLGLMAKADISGEKAQSQEIFGLVLILVHFGMVVSIIVQLYFGIQAVSEE 291
            ++ L +R ++PDL P+ FLW+ + P  YYYE +ECGRR LLTG L+F    TA Q A AC+FAF+SLL FELLRPH+   D  LYR GC++IF SNFL L+ K D +GE  ++    G +LI V+  ++++++   +F  Q + ++
Sbjct: 1011 QERLDQRRRNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADMWLYRLGCVIIFLSNFLALLIKVDAAGEGNRAA--LGGILIAVNVFLILAVLSTSWFATQQMVDD 1154          
BLAST of mRNA_H-paniculata_contig3154.8512.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 3.100e-30
Identity = 71/170 (41.76%), Postives = 106/170 (62.35%), Query Frame = 0
Query:  145 REQMLRRRLQDP----DLQPTKFLWEPYEPHNYYYETVECGRRCLLTGALVFVMPNTAVQVAGACVFAFLSLLVFELLRPHISDTDAGLYRTGCIVIFFSNFLGLMAKADISGEKAQSQEIFGLVLILVHFGMVVSIIVQLYF-----GIQAVSEELDDTFEDLLRKNNT 305
            R+ ++R R        +L+P K LWEPY+P  Y+YE VECGRR  LTG  VF+ P TA QVA    FA   L+VFE+L P +   DAGLYR+G +V+F+S +L L+ K D S E ++SQ++F  VL+  H  MV++++++        GI+A+ ++++    D+   NNT
Sbjct:  196 RKDLVRERSSGTATPENLRPMKDLWEPYKPRRYFYELVECGRRIGLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPVDAGLYRSGALVVFYSMYLALLLKVDASDESSESQQVFAAVLVAAHVSMVLAVLLRSLLSAKKVGIEAMRKKVE--IRDVPVANNT 363          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3154.8512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTT7_ECTSI1.360e-5747.13Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FRH3_ECTSI3.120e-3648.63Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JCK8_9PHAE3.970e-3651.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRH0_ECTSI2.200e-3546.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FRH4_ECTSI1.480e-3450.00Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7G0B0_ECTSI1.340e-3252.67Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JRA9_9PHAE1.410e-3253.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS31_9PHAE8.450e-3247.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRH1_ECTSI8.290e-3145.89Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FUB5_ECTSI3.100e-3041.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 261..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..249
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 284..981
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 250..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..215
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 216..226
NoneNo IPR availableTMHMMTMhelixcoord: 227..249
NoneNo IPR availableTMHMMTMhelixcoord: 261..283
NoneNo IPR availableTMHMMTMhelixcoord: 4..18
NoneNo IPR availableTMHMMTMhelixcoord: 190..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3154contigH-paniculata_contig3154:5920..16930 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3154.8512.1mRNA_H-paniculata_contig3154.8512.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3154 5748..17972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3154.8512.1 ID=prot_H-paniculata_contig3154.8512.1|Name=mRNA_H-paniculata_contig3154.8512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=982bp
MILLYPIGIPFMFAIVLLQRKDKINPPTLDELVEARGRARGNKSRNGKPR
RSPSTAINPMVSTKQRIEDIMEKERQTPSREHSARRSSSSSNNKNNNNRN
SKSGGDGRGCRVSEKEKRCSNRYSTLSELKDGAGAGGHSGAEFAREQMLR
RRLQDPDLQPTKFLWEPYEPHNYYYETVECGRRCLLTGALVFVMPNTAVQ
VAGACVFAFLSLLVFELLRPHISDTDAGLYRTGCIVIFFSNFLGLMAKAD
ISGEKAQSQEIFGLVLILVHFGMVVSIIVQLYFGIQAVSEELDDTFEDLL
RKNNTHCRCSHALLANGHSSRHCRIQSCKRSGGDADADDLDATVVWGREA
ATANIHRRREIEMGEGYGRGYHHKHDDSGSYLSDSADMRSMLRKGSAMRL
GGIRFGRKNRNGAKVWSRSSKGSRNRRGWGSDISPTSSGFASQREHHARA
AAANKELRKNADKPTSEGRSNRRSEAGLNCDGVVRASARGRSSRRCRRTL
GNGDYGTPCLSRSPGGGGISSVEPPLDISSRVAADSTVSMTAAGVERANI
LESSQPRGRSIFATNRRPRSSSVGAKMTKERDVGSGFSSGFSSGSGLFSL
AVASAADVVRLEARGEAAGDDIGGGGRVSEEEKKEALRVVVNSRRVQHQQ
QHQQQQQLRCQPVSSRQTHISAAAVAHARMGLRRYASASSVTSPESSPSR
RAQRHVRFHRRSTSETSNGSDFMVALRAAVIASSRRTSRAAIARQVSVRP
SWLLERAVAVDDPFGQSRACASGMGVGGDVDTRGWRDKESKDRFASLEGG
TKTRVVSVPKIVQPTRSGATAAVATAAAADVDLSHDNLSPMHLNPALTRS
ATDGKDRAVVPGSAAAAINVTTTSSSYDAGRTGRSRRDSSHMGHCNLLPP
MRLNPALTHTATDEKERWVSLESAAAAIDVSSTLRSSDVGRTGRRWRGSS
RWRVGMETIGRSKAGSTGAKKGFEVEIGDWL*
back to top