prot_H-paniculata_contig3151.8507.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3151.8507.1
Unique Nameprot_H-paniculata_contig3151.8507.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length166
Homology
BLAST of mRNA_H-paniculata_contig3151.8507.1 vs. uniprot
Match: D7G2U4_ECTSI (DUF908 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U4_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.280e-50
Identity = 82/106 (77.36%), Postives = 92/106 (86.79%), Query Frame = 0
Query:    1 LRFLAVVLRTCVNKHVFCSTEHLRALLAARDDDVADAALRCLTLLTMPPLLHRHQQPELHSMCSVHNDKAVATELTAMSGGWGGRGQGLGLLACVTGAVEGEETET 106
            L FLAV++R+CVNKHVF S EHLR+LLAA DD VA++ALRCL LLT+PPLLHRHQQPELHSMCS+H DKAV+ EL  +SGGWGGRGQGLGLLACVTG VEGE   T
Sbjct:  130 LNFLAVLMRSCVNKHVFSSAEHLRSLLAAGDDAVAESALRCLMLLTVPPLLHRHQQPELHSMCSIHKDKAVSAELMTLSGGWGGRGQGLGLLACVTGRVEGEAKGT 235          
BLAST of mRNA_H-paniculata_contig3151.8507.1 vs. uniprot
Match: A0A835YUZ0_9STRA (DUF908 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ0_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.190e-22
Identity = 52/98 (53.06%), Postives = 65/98 (66.33%), Query Frame = 0
Query:    1 LRFLAVVLRTCVNKHVFCSTEHLRALLAARDDDVADAALRCLTLLTMPPLLHRHQQPELH--SMCSVHNDKAVATELTAMSGGWGGRGQGLGLLACVT 96
            LRF AV+L+   NK ++ STEHL ALLAARDD   + ALRCL  + MP  LHR  + ++      S  + K  A +LT +S GWGGRGQGLGLL+CVT
Sbjct:  119 LRFTAVLLQNSTNKAIYSSTEHLLALLAARDDGAVELALRCLAAMEMPAALHRQSRGDMMPPQQFSSLDAKGAAKKLTILSQGWGGRGQGLGLLSCVT 216          
BLAST of mRNA_H-paniculata_contig3151.8507.1 vs. uniprot
Match: A0A2R6WHI5_MARPO (HECT-type E3 ubiquitin transferase n=3 Tax=Embryophyta TaxID=3193 RepID=A0A2R6WHI5_MARPO)

HSP 1 Score: 65.5 bits (158), Expect = 2.680e-9
Identity = 35/94 (37.23%), Postives = 51/94 (54.26%), Query Frame = 0
Query:    1 LRFLAVVLRTCVNKHVFCSTEHLRALLAARDDDVADAALRCLTLLTMPPLLHRHQQPELHSMCSVHNDKAVATELTAMSGGWGGRGQGLGLLAC 94
            LR   +VL  C+NK ++ S EH+ AL A+ D ++  AAL  L      P+       + +     H D A+   L ++S GWGG+ +GLGLLAC
Sbjct:   92 LRVTRIVLENCMNKFLYNSNEHVSALFASTDPEIVIAALETLAAFVKKPV-------QSNRAMRWHGDAALNARLFSLSQGWGGKEEGLGLLAC 178          
BLAST of mRNA_H-paniculata_contig3151.8507.1 vs. uniprot
Match: A0A3S3QH24_9MAGN (HECT-type E3 ubiquitin transferase n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3QH24_9MAGN)

HSP 1 Score: 64.7 bits (156), Expect = 4.960e-9
Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 0
Query:    1 LRFLAVVLRTCVNKHVFCSTE-HLRALLAARDDDVADAALRCLTLLTMPPLLHRHQQPELHSMCSVHNDKAVATELTAMSGGWGGRGQGLGLLAC 94
            LR + ++L  C NKH + S E HL ALLA+ D DV +A+L+ L       L            CS+  D ++ ++L A S GWGG+ +GLGL+AC
Sbjct:  185 LRVIRIILDNCTNKHFYSSYEQHLSALLASTDADVVEASLQTLAAFLKKTL----------GKCSIR-DASLNSKLFAFSQGWGGKEEGLGLIAC 268          
BLAST of mRNA_H-paniculata_contig3151.8507.1 vs. uniprot
Match: A0A8K0MUC4_COCNU (Putative E3 ubiquitin-protein ligase UPL1 n=3 Tax=Magnoliopsida TaxID=3398 RepID=A0A8K0MUC4_COCNU)

HSP 1 Score: 64.7 bits (156), Expect = 4.980e-9
Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 0
Query:    1 LRFLAVVLRTCVNKHVFCSTE-HLRALLAARDDDVADAALRCLTLLTMPPLLHRHQQPELHSMCSVHNDKAVATELTAMSGGWGGRGQGLGLLAC 94
            LR   ++L  C NKH + S E HL +LLA+ D DV +A+L  LT      +            CS+  D ++ ++L A S GWGG+ +GLGL+AC
Sbjct:   83 LRVTRIILENCTNKHFYSSFEQHLSSLLASSDADVVEASLHALTAFLKKTV----------GKCSIR-DASLTSKLFAFSQGWGGKEEGLGLIAC 166          
BLAST of mRNA_H-paniculata_contig3151.8507.1 vs. uniprot
Match: A0A8B9AF13_PHODC (HECT-type E3 ubiquitin transferase n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AF13_PHODC)

HSP 1 Score: 64.3 bits (155), Expect = 6.730e-9
Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 0
Query:    1 LRFLAVVLRTCVNKHVFCSTE-HLRALLAARDDDVADAALRCLTLLTMPPLLHRHQQPELHSMCSVHNDKAVATELTAMSGGWGGRGQGLGLLAC 94
            LR   +++  C NKH++ S E HL +LLA+ D DV +A+L+ LT      +            CS+  D ++ ++L A S GWGGR +G+GL+AC
Sbjct:  112 LRVTRIIVEKCTNKHLYSSFEQHLSSLLASTDADVVEASLQTLTAFLKKTV----------GKCSIR-DTSLTSKLFAFSQGWGGREEGIGLIAC 195          
BLAST of mRNA_H-paniculata_contig3151.8507.1 vs. uniprot
Match: A0A6I9SN25_ELAGV (HECT-type E3 ubiquitin transferase n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9SN25_ELAGV)

HSP 1 Score: 64.3 bits (155), Expect = 6.730e-9
Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 0
Query:    1 LRFLAVVLRTCVNKHVFCSTE-HLRALLAARDDDVADAALRCLTLLTMPPLLHRHQQPELHSMCSVHNDKAVATELTAMSGGWGGRGQGLGLLAC 94
            LR   ++L  C NKH + S E HL +LLA+ D DV +A+L  LT      +            CS+  D ++ ++L A S GWGG+ +GLGL+AC
Sbjct:   92 LRVTRIILENCTNKHFYSSFEQHLSSLLASSDADVVEASLHTLTAFLKKTV----------GKCSIR-DASLTSKLFAFSQGWGGKEEGLGLIAC 175          
BLAST of mRNA_H-paniculata_contig3151.8507.1 vs. uniprot
Match: A0A2I0BGW2_9ASPA (HECT-type E3 ubiquitin transferase n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0BGW2_9ASPA)

HSP 1 Score: 63.9 bits (154), Expect = 9.140e-9
Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 0
Query:    1 LRFLAVVLRTCVNKHVFCSTE-HLRALLAARDDDVADAALRCLTLLTMPPLLHRHQQPELHSMCSVHNDKAVATELTAMSGGWGGRGQGLGLLAC 94
            LR   ++L  C NKH++ S E +L +LLA+ D DV +A+L+ LT     P             CS+  D ++ ++L +++ GWGG+ +GLGL+AC
Sbjct:   92 LRVTRIILENCTNKHLYSSFEQNLSSLLASEDADVVEASLQTLTAFLKKPA----------GKCSIR-DSSLTSKLFSLTQGWGGKEEGLGLVAC 175          
BLAST of mRNA_H-paniculata_contig3151.8507.1 vs. uniprot
Match: A0A6A3AJL1_HIBSY (HECT-type E3 ubiquitin transferase n=4 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AJL1_HIBSY)

HSP 1 Score: 63.9 bits (154), Expect = 9.140e-9
Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 0
Query:    1 LRFLAVVLRTCVNKHVFCSTEHLRALLAARDDDVADAALRCLTLLTMPPLLHRHQQPELHSMCSVHNDKAVATELTAMSGGWGGRGQGLGLLAC 94
            LR + +VL  C NKH + S EHL +LLA+ D DV +A L+ L       +             SV  D ++ ++L A++ GWGG+ +GLGL+AC
Sbjct:   92 LRVIRIVLENCTNKHFYSSYEHLSSLLASTDADVVEACLQTLAAFLKKTI----------GKYSVR-DASLNSKLFALAQGWGGKEEGLGLIAC 174          
BLAST of mRNA_H-paniculata_contig3151.8507.1 vs. uniprot
Match: A0A6I9RM46_ELAGV (HECT-type E3 ubiquitin transferase n=5 Tax=Cocoseae TaxID=169705 RepID=A0A6I9RM46_ELAGV)

HSP 1 Score: 63.5 bits (153), Expect = 1.240e-8
Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 0
Query:    1 LRFLAVVLRTCVNKHVFCSTE-HLRALLAARDDDVADAALRCLTLLTMPPLLHRHQQPELHSMCSVHNDKAVATELTAMSGGWGGRGQGLGLLAC 94
            LR   +++  C NKH + S E HL +LLA+ D DV +A+L+ LT      +            CS+  D ++ ++L A S GWGGR +G+GL+AC
Sbjct:   92 LRVTRIIVEKCTNKHFYSSFEQHLSSLLASTDADVVEASLQTLTAFLKKTV----------GKCSIR-DASLTSKLFAFSQGWGGREEGIGLIAC 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3151.8507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2U4_ECTSI2.280e-5077.36DUF908 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YUZ0_9STRA1.190e-2253.06DUF908 domain-containing protein (Fragment) n=1 Ta... [more]
A0A2R6WHI5_MARPO2.680e-937.23HECT-type E3 ubiquitin transferase n=3 Tax=Embryop... [more]
A0A3S3QH24_9MAGN4.960e-940.00HECT-type E3 ubiquitin transferase n=1 Tax=Cinnamo... [more]
A0A8K0MUC4_COCNU4.980e-938.95Putative E3 ubiquitin-protein ligase UPL1 n=3 Tax=... [more]
A0A8B9AF13_PHODC6.730e-937.89HECT-type E3 ubiquitin transferase n=1 Tax=Phoenix... [more]
A0A6I9SN25_ELAGV6.730e-938.95HECT-type E3 ubiquitin transferase n=4 Tax=Arecace... [more]
A0A2I0BGW2_9ASPA9.140e-936.84HECT-type E3 ubiquitin transferase n=1 Tax=Apostas... [more]
A0A6A3AJL1_HIBSY9.140e-938.30HECT-type E3 ubiquitin transferase n=4 Tax=Hibiscu... [more]
A0A6I9RM46_ELAGV1.240e-837.89HECT-type E3 ubiquitin transferase n=5 Tax=Cocosea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010309E3 ubiquitin ligase, domain of unknown function DUF908PFAMPF06012DUF908coord: 1..148
e-value: 4.1E-10
score: 39.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3151contigH-paniculata_contig3151:15317..18201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3151.8507.1mRNA_H-paniculata_contig3151.8507.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3151 15317..18202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3151.8507.1 ID=prot_H-paniculata_contig3151.8507.1|Name=mRNA_H-paniculata_contig3151.8507.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=166bp
LRFLAVVLRTCVNKHVFCSTEHLRALLAARDDDVADAALRCLTLLTMPPL
LHRHQQPELHSMCSVHNDKAVATELTAMSGGWGGRGQGLGLLACVTGAVE
GEETETMQDDPIPEQPSSSSSTTAPRPILPAHAGDLSFEYTPVPTTTSTA
DGAFGAEAGGGDGGSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010309E3_Ub_ligase_DUF908