prot_H-paniculata_contig31258.8448.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31258.8448.1
Unique Nameprot_H-paniculata_contig31258.8448.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length108
Homology
BLAST of mRNA_H-paniculata_contig31258.8448.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.950e-8
Identity = 30/66 (45.45%), Postives = 39/66 (59.09%), Query Frame = 0
Query:   24 RSLCMDALNIVLTESYSKRGGYLPIKTFQLVSLQMCIMCREFSTLHVRVAIDTPRRLWAIAADQPS 89
            RS C+  L + L E+   +  Y   K  QL SL++C+ CR + TLH+ V   TPRRL A AAD PS
Sbjct:  133 RSSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLA-AADAPS 197          
BLAST of mRNA_H-paniculata_contig31258.8448.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 2.430e-7
Identity = 29/73 (39.73%), Postives = 40/73 (54.79%), Query Frame = 0
Query:   24 RSLCMDALNIVLTESYSKRGGYLPIKTFQLVSLQMCIMCREFSTLHVRVAIDTPRRLWAIAADQPSRGMVMAR 96
            RS C++AL I L E+ +    Y   K  QL SL+ C+ CR + TLH++V    PRRL A A   P    ++ R
Sbjct:  110 RSSCLNALVIALNETCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPELLCR 182          
BLAST of mRNA_H-paniculata_contig31258.8448.1 vs. uniprot
Match: D7FUL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 6.890e-6
Identity = 28/66 (42.42%), Postives = 38/66 (57.58%), Query Frame = 0
Query:   23 GRSLCMDALNIVLTESYSKRGGYLPIKTFQLVSLQMCIMCREFSTLHVRVAIDTPRRLWAIAADQP 88
            GRS C++A+ + L+E+   +  Y   K  QL SL  C  CR   T+H++V    PRRL A AAD P
Sbjct:  132 GRSSCLNAIVVALSETCDGKSWYTSTKELQLASLGFCTACRNHQTVHLKVDEHIPRRLLA-AADAP 196          
BLAST of mRNA_H-paniculata_contig31258.8448.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 9.580e-5
Identity = 25/62 (40.32%), Postives = 36/62 (58.06%), Query Frame = 0
Query:   27 CMDALNIVLTESYSKRGGYLPIKTFQLVSLQMCIMCREFSTLHVRVAIDTPRRLWAIAADQP 88
            C++A+ + L E+   +  Y   K  QL SL+ C+ CR + TLH+ V +  PR L A AAD P
Sbjct:   36 CLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLA-AADGP 96          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31258.8448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KPY7_9PHAE3.950e-845.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2S9_ECTSI2.430e-739.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUL5_ECTSI6.890e-642.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZZ4_9PHAE9.580e-540.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31258contigH-paniculata_contig31258:358..2051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31258.8448.1mRNA_H-paniculata_contig31258.8448.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31258 358..2161 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31258.8448.1 ID=prot_H-paniculata_contig31258.8448.1|Name=mRNA_H-paniculata_contig31258.8448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp
MYSVGSKAAAAGTSQDKVDRPSGRSLCMDALNIVLTESYSKRGGYLPIKT
FQLVSLQMCIMCREFSTLHVRVAIDTPRRLWAIAADQPSRGMVMARPYQR
QKKRRRNM
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